RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 SAA1P0DJI8 122 aaPredicted RBP5.31□□□□□ -1.56
VPS50-211ENST00000474412 OR5H8P0DN80 308 aa5.31□□□□□ -1.56
VPS50-211ENST00000474412 MYOD1P15172 320 aa5.31□□□□□ -1.56
VPS50-211ENST00000474412 CD36P16671 472 aa5.31□□□□□ -1.56
VPS50-211ENST00000474412 GALP22466 123 aa5.31□□□□□ -1.56
VPS50-211ENST00000474412 MC5RP33032 325 aa5.31□□□□□ -1.56
VPS50-211ENST00000474412 PSMD7P51665 324 aa5.31□□□□□ -1.56
VPS50-211ENST00000474412 LSM3P62310 102 aaKnown RBP5.31□□□□□ -1.56
VPS50-211ENST00000474412 MRPS15P82914 257 aaKnown RBP5.31□□□□□ -1.56
VPS50-211ENST00000474412 RUNX1Q01196 453 aa5.31□□□□□ -1.56
VPS50-211ENST00000474412 FXYD3Q14802 87 aa5.31□□□□□ -1.56
VPS50-211ENST00000474412 CDNFQ49AH0 187 aa5.31□□□□□ -1.56
VPS50-211ENST00000474412 KCTD21Q4G0X4 260 aa5.31□□□□□ -1.56
VPS50-211ENST00000474412 ACTBL2Q562R1 376 aa5.31□□□□□ -1.56
VPS50-211ENST00000474412 DEFB121Q5J5C9 76 aa5.31□□□□□ -1.56
VPS50-211ENST00000474412 IDNKQ5T6J7 187 aa5.31□□□□□ -1.56
VPS50-211ENST00000474412 C9orf66Q5T8R8 295 aa5.31□□□□□ -1.56
VPS50-211ENST00000474412 ZNF660Q6AZW8 331 aaPredicted RBP5.31□□□□□ -1.56
VPS50-211ENST00000474412 Q6ZS49 121 aa5.31□□□□□ -1.56
VPS50-211ENST00000474412 KCTD9Q7L273 389 aa5.31□□□□□ -1.56
VPS50-211ENST00000474412 VKORC1L1Q8N0U8 176 aa5.31□□□□□ -1.56
VPS50-211ENST00000474412 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.31□□□□□ -1.56
VPS50-211ENST00000474412 OR1N2Q8NGR9 330 aa5.31□□□□□ -1.56
VPS50-211ENST00000474412 SNAPC3Q92966 411 aa5.31□□□□□ -1.56
VPS50-211ENST00000474412 TSNAXQ99598 290 aaKnown RBP5.31□□□□□ -1.56
VPS50-211ENST00000474412 Q9H521 79 aa5.31□□□□□ -1.56
VPS50-211ENST00000474412 SSR3Q9UNL2 185 aa5.31□□□□□ -1.56
VPS50-211ENST00000474412 VSIG4Q9Y279 399 aa5.31□□□□□ -1.56
VPS50-211ENST00000474412 A0A1B0GW64 132 aa5.3□□□□□ -1.56
VPS50-211ENST00000474412 METTL21EPA6NDL7 271 aa5.3□□□□□ -1.56
VPS50-211ENST00000474412 LINC01619G3V211 115 aa5.3□□□□□ -1.56
VPS50-211ENST00000474412 OVOL1O14753 267 aa5.3□□□□□ -1.56
VPS50-211ENST00000474412 PRH1P02810 166 aa5.3□□□□□ -1.56
VPS50-211ENST00000474412 TRGV3P03979 118 aa5.3□□□□□ -1.56
VPS50-211ENST00000474412 OR8U8P0C7N1 319 aa5.3□□□□□ -1.56
VPS50-211ENST00000474412 EDN2P20800 178 aa5.3□□□□□ -1.56
VPS50-211ENST00000474412 DTYMKP23919 212 aa5.3□□□□□ -1.56
VPS50-211ENST00000474412 SERPINB10P48595 397 aa5.3□□□□□ -1.56
VPS50-211ENST00000474412 BRWD1-AS2P59051 145 aa5.3□□□□□ -1.56
VPS50-211ENST00000474412 GNG2P59768 71 aa5.3□□□□□ -1.56
VPS50-211ENST00000474412 ZNF45Q02386 682 aa5.3□□□□□ -1.56
VPS50-211ENST00000474412 EIF4EBP1Q13541 118 aaPredicted RBP5.3□□□□□ -1.56
VPS50-211ENST00000474412 TNXAQ16473 311 aa5.3□□□□□ -1.56
VPS50-211ENST00000474412 HACD4Q5VWC8 232 aa5.3□□□□□ -1.56
VPS50-211ENST00000474412 ZNF645Q8N7E2 425 aa5.3□□□□□ -1.56
VPS50-211ENST00000474412 POC5Q8NA72 575 aa5.3□□□□□ -1.56
VPS50-211ENST00000474412 OR5T1Q8NG75 326 aa5.3□□□□□ -1.56
VPS50-211ENST00000474412 FLYWCH2Q96CP2 140 aaKnown RBP5.3□□□□□ -1.56
VPS50-211ENST00000474412 YIPF6Q96EC8 236 aa5.3□□□□□ -1.56
VPS50-211ENST00000474412 ASCL2Q99929 193 aa5.3□□□□□ -1.56
VPS50-211ENST00000474412 MCRIP2Q9BUT9 160 aaKnown RBP5.3□□□□□ -1.56
VPS50-211ENST00000474412 ST6GALNAC5Q9BVH7 336 aa5.3□□□□□ -1.56
VPS50-211ENST00000474412 TAS2R8Q9NYW2 309 aa5.3□□□□□ -1.56
VPS50-211ENST00000474412 ANXA10Q9UJ72 324 aa5.3□□□□□ -1.56
VPS50-211ENST00000474412 SPATA2Q9UM82 520 aa5.3□□□□□ -1.56
VPS50-211ENST00000474412 LSM4Q9Y4Z0 139 aaKnown RBP5.3□□□□□ -1.56
VPS50-211ENST00000474412 RBM7Q9Y580 266 aaKnown RBP5.3□□□□□ -1.56
VPS50-211ENST00000474412 HUWE1Q7Z6Z7 4374 aaKnown RBP5.3□□□□□ -1.56
VPS50-211ENST00000474412 TRAV18A0A075B6X5 111 aa5.29□□□□□ -1.56
VPS50-211ENST00000474412 E7EUB6 86 aa5.29□□□□□ -1.56
VPS50-211ENST00000474412 TNFSF12O43508 249 aa5.29□□□□□ -1.56
VPS50-211ENST00000474412 FCGR3BO75015 233 aa5.29□□□□□ -1.56
VPS50-211ENST00000474412 SAP30O75446 220 aa5.29□□□□□ -1.56
VPS50-211ENST00000474412 DIRAS3O95661 229 aa5.29□□□□□ -1.56
VPS50-211ENST00000474412 PRSS2P07478 247 aa5.29□□□□□ -1.56
VPS50-211ENST00000474412 SMIM18P0DKX4 95 aa5.29□□□□□ -1.56
VPS50-211ENST00000474412 SPNP16150 400 aa5.29□□□□□ -1.56
VPS50-211ENST00000474412 AADACP22760 399 aa5.29□□□□□ -1.56
VPS50-211ENST00000474412 TALDO1P37837 337 aa5.29□□□□□ -1.56
VPS50-211ENST00000474412 NCS1P62166 190 aa5.29□□□□□ -1.56
VPS50-211ENST00000474412 AKIRIN2Q53H80 203 aa5.29□□□□□ -1.56
VPS50-211ENST00000474412 ZNF562Q6V9R5 426 aa5.29□□□□□ -1.56
VPS50-211ENST00000474412 TPRA1Q86W33 373 aa5.29□□□□□ -1.56
VPS50-211ENST00000474412 TCTEX1D1Q8N7M0 179 aa5.29□□□□□ -1.56
VPS50-211ENST00000474412 OR13F1Q8NGS4 319 aa5.29□□□□□ -1.56
VPS50-211ENST00000474412 SRSF12Q8WXF0 261 aaKnown RBP5.29□□□□□ -1.56
VPS50-211ENST00000474412 ACOT12Q8WYK0 555 aa5.29□□□□□ -1.56
VPS50-211ENST00000474412 B9D2Q9BPU9 175 aa5.29□□□□□ -1.56
VPS50-211ENST00000474412 GPR61Q9BZJ8 451 aa5.29□□□□□ -1.56
VPS50-211ENST00000474412 FXYD6Q9H0Q3 95 aa5.29□□□□□ -1.56
VPS50-211ENST00000474412 ZNF430Q9H8G1 570 aaPredicted RBP5.29□□□□□ -1.56
VPS50-211ENST00000474412 CCL28Q9NRJ3 127 aa5.29□□□□□ -1.56
VPS50-211ENST00000474412 ZNF355PQ9NSJ1 428 aa5.29□□□□□ -1.56
VPS50-211ENST00000474412 ZNF256Q9Y2P7 627 aaPredicted RBP5.29□□□□□ -1.56
VPS50-211ENST00000474412 RBMX2Q9Y388 322 aaKnown RBP5.29□□□□□ -1.56
VPS50-211ENST00000474412 OR2W1Q9Y3N9 320 aa5.29□□□□□ -1.56
VPS50-211ENST00000474412 ETV7Q9Y603 341 aa5.29□□□□□ -1.56
VPS50-211ENST00000474412 TENM3Q9P273 2699 aa5.29□□□□□ -1.56
VPS50-211ENST00000474412 TRIM64CA6NLI5 447 aa5.28□□□□□ -1.56
VPS50-211ENST00000474412 RAMP3O60896 148 aa5.28□□□□□ -1.56
VPS50-211ENST00000474412 CNIH1O95406 144 aa5.28□□□□□ -1.56
VPS50-211ENST00000474412 HLA-DQB1P01920 261 aa5.28□□□□□ -1.56
VPS50-211ENST00000474412 EIF4EP06730 217 aaKnown RBP5.28□□□□□ -1.56
VPS50-211ENST00000474412 FXYD4P59646 89 aa5.28□□□□□ -1.56
VPS50-211ENST00000474412 UBE2KP61086 200 aa5.28□□□□□ -1.56
VPS50-211ENST00000474412 PRSS8Q16651 343 aa5.28□□□□□ -1.56
VPS50-211ENST00000474412 RTL8BQ17RB0 113 aa5.28□□□□□ -1.56
VPS50-211ENST00000474412 CNIH2Q6PI25 160 aa5.28□□□□□ -1.56
VPS50-211ENST00000474412 SSX9Q7RTT3 188 aa5.28□□□□□ -1.56
VPS50-211ENST00000474412 TMEM17Q86X19 198 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms