RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 RPS19BP1Q86WX3 136 aaKnown RBP15.45■□□□□ 0.06
ECHDC1-214ENST00000474289 OR4P4Q8NGL7 312 aa15.45■□□□□ 0.06
ECHDC1-214ENST00000474289 CBY3A6NI87 242 aa15.44■□□□□ 0.06
ECHDC1-214ENST00000474289 PRSS46E5RG02 174 aa15.44■□□□□ 0.06
ECHDC1-214ENST00000474289 SRFP11831 508 aa15.44■□□□□ 0.06
ECHDC1-214ENST00000474289 BPIFB3P59826 476 aa15.44■□□□□ 0.06
ECHDC1-214ENST00000474289 WDR86Q86TI4 376 aa15.44■□□□□ 0.06
ECHDC1-214ENST00000474289 C1orf159Q96HA4 380 aa15.44■□□□□ 0.06
ECHDC1-214ENST00000474289 TAAR6Q96RI8 345 aa15.44■□□□□ 0.06
ECHDC1-214ENST00000474289 KCNIP1Q9NZI2 227 aa15.44■□□□□ 0.06
ECHDC1-214ENST00000474289 CGAP01215 116 aa15.44■□□□□ 0.06
ECHDC1-214ENST00000474289 Q56UQ5 140 aa15.44■□□□□ 0.06
ECHDC1-214ENST00000474289 C18orf32Q8TCD1 76 aa15.44■□□□□ 0.06
ECHDC1-214ENST00000474289 VPS25Q9BRG1 176 aa15.44■□□□□ 0.06
ECHDC1-214ENST00000474289 HELTA6NFD8 242 aa15.43■□□□□ 0.06
ECHDC1-214ENST00000474289 SELENOVP59797 346 aa15.43■□□□□ 0.06
ECHDC1-214ENST00000474289 SLAQ13239 276 aa15.43■□□□□ 0.06
ECHDC1-214ENST00000474289 LDLRAD2Q5SZI1 272 aa15.43■□□□□ 0.06
ECHDC1-214ENST00000474289 TMEM45BQ96B21 275 aa15.43■□□□□ 0.06
ECHDC1-214ENST00000474289 LY6G6EA0A0G2JKS1 128 aa15.43■□□□□ 0.06
ECHDC1-214ENST00000474289 H0YJW9 148 aa15.43■□□□□ 0.06
ECHDC1-214ENST00000474289 APCSP02743 223 aa15.43■□□□□ 0.06
ECHDC1-214ENST00000474289 CEBPDP49716 269 aaPredicted RBP15.43■□□□□ 0.06
ECHDC1-214ENST00000474289 ERVK11-1P61568 191 aa15.43■□□□□ 0.06
ECHDC1-214ENST00000474289 ARG2P78540 354 aa15.43■□□□□ 0.06
ECHDC1-214ENST00000474289 RELBQ01201 579 aa15.43■□□□□ 0.06
ECHDC1-214ENST00000474289 EBLN2Q6P2I7 272 aa15.43■□□□□ 0.06
ECHDC1-214ENST00000474289 GCNT2Q8N0V5 402 aa15.43■□□□□ 0.06
ECHDC1-214ENST00000474289 FSCN3Q9NQT6 498 aa15.43■□□□□ 0.06
ECHDC1-214ENST00000474289 OSTCQ9NRP0 149 aa15.43■□□□□ 0.06
ECHDC1-214ENST00000474289 MRPL27Q9P0M9 148 aaKnown RBP15.43■□□□□ 0.06
ECHDC1-214ENST00000474289 TP73-AS1Q9UF72 201 aa15.43■□□□□ 0.06
ECHDC1-214ENST00000474289 U3KQA8 63 aa15.43■□□□□ 0.06
ECHDC1-214ENST00000474289 COL6A3P12111 3177 aa15.42■□□□□ 0.06
ECHDC1-214ENST00000474289 IGHV3-64DA0A0J9YX35 117 aa15.42■□□□□ 0.06
ECHDC1-214ENST00000474289 MT-CO2P00403 227 aa15.42■□□□□ 0.06
ECHDC1-214ENST00000474289 AREGP15514 252 aa15.42■□□□□ 0.06
ECHDC1-214ENST00000474289 CRYBB3P26998 211 aa15.42■□□□□ 0.06
ECHDC1-214ENST00000474289 TMPRSS3P57727 454 aa15.42■□□□□ 0.06
ECHDC1-214ENST00000474289 RHOGP84095 191 aa15.42■□□□□ 0.06
ECHDC1-214ENST00000474289 SMIM15Q7Z3B0 74 aa15.42■□□□□ 0.06
ECHDC1-214ENST00000474289 SCCPDHQ8NBX0 429 aa15.42■□□□□ 0.06
ECHDC1-214ENST00000474289 PHF7Q9BWX1 381 aaPredicted RBP15.42■□□□□ 0.06
ECHDC1-214ENST00000474289 LSM4Q9Y4Z0 139 aaKnown RBP15.42■□□□□ 0.06
ECHDC1-214ENST00000474289 TET2Q6N021 2002 aaPredicted RBP15.42■□□□□ 0.06
ECHDC1-214ENST00000474289 FAM181BA6NEQ2 426 aa15.42■□□□□ 0.06
ECHDC1-214ENST00000474289 PSPNO60542 156 aa15.42■□□□□ 0.06
ECHDC1-214ENST00000474289 HBZP02008 142 aa15.42■□□□□ 0.06
ECHDC1-214ENST00000474289 ZNF146Q15072 292 aa15.42■□□□□ 0.06
ECHDC1-214ENST00000474289 TNXAQ16473 311 aa15.42■□□□□ 0.06
ECHDC1-214ENST00000474289 STPG3Q8N7X2 389 aa15.42■□□□□ 0.06
ECHDC1-214ENST00000474289 CST9LQ9H4G1 147 aa15.42■□□□□ 0.06
ECHDC1-214ENST00000474289 HEYLQ9NQ87 328 aaPredicted RBP15.42■□□□□ 0.06
ECHDC1-214ENST00000474289 OCIAD2Q56VL3 154 aa15.41■□□□□ 0.06
ECHDC1-214ENST00000474289 LRRC10Q5BKY1 277 aa15.41■□□□□ 0.06
ECHDC1-214ENST00000474289 NINJ1Q92982 152 aa15.41■□□□□ 0.06
ECHDC1-214ENST00000474289 FAM186AA6NE01 2351 aa15.41■□□□□ 0.06
ECHDC1-214ENST00000474289 SMIM27A0A1W2PRY6 76 aa15.41■□□□□ 0.06
ECHDC1-214ENST00000474289 CYC1P08574 325 aa15.41■□□□□ 0.06
ECHDC1-214ENST00000474289 TBR1Q16650 682 aa15.41■□□□□ 0.06
ECHDC1-214ENST00000474289 Q8IYB0 196 aa15.41■□□□□ 0.06
ECHDC1-214ENST00000474289 WDR31Q8NA23 367 aa15.41■□□□□ 0.06
ECHDC1-214ENST00000474289 NEUROG1Q92886 237 aa15.41■□□□□ 0.06
ECHDC1-214ENST00000474289 WDR54Q9H977 334 aa15.41■□□□□ 0.06
ECHDC1-214ENST00000474289 TECRQ9NZ01 308 aaKnown RBP15.41■□□□□ 0.06
ECHDC1-214ENST00000474289 TMEM30CPA0ZSE6 113 aa15.4■□□□□ 0.06
ECHDC1-214ENST00000474289 ZNF891A8MT65 544 aaPredicted RBP15.4■□□□□ 0.06
ECHDC1-214ENST00000474289 HSBP1O75506 76 aa15.4■□□□□ 0.06
ECHDC1-214ENST00000474289 P04436 131 aa15.4■□□□□ 0.06
ECHDC1-214ENST00000474289 OTX2P32243 289 aa15.4■□□□□ 0.06
ECHDC1-214ENST00000474289 ABHD12Q8N2K0 398 aa15.4■□□□□ 0.06
ECHDC1-214ENST00000474289 OR8B3Q8NGG8 313 aa15.4■□□□□ 0.06
ECHDC1-214ENST00000474289 OR8B2Q96RD0 313 aa15.4■□□□□ 0.06
ECHDC1-214ENST00000474289 LINC00470Q9BZP3 86 aa15.4■□□□□ 0.06
ECHDC1-214ENST00000474289 PTPRBP23467 1997 aa15.4■□□□□ 0.06
ECHDC1-214ENST00000474289 ISLRO14498 428 aa15.39■□□□□ 0.05
ECHDC1-214ENST00000474289 TIGITQ495A1 244 aa15.39■□□□□ 0.05
ECHDC1-214ENST00000474289 IBA57Q5T440 356 aaKnown RBP15.39■□□□□ 0.05
ECHDC1-214ENST00000474289 GFRA3O60609 400 aa15.39■□□□□ 0.05
ECHDC1-214ENST00000474289 KLF7O75840 302 aaPredicted RBP15.39■□□□□ 0.05
ECHDC1-214ENST00000474289 CA1P00915 261 aaPredicted RBP15.39■□□□□ 0.05
ECHDC1-214ENST00000474289 LINC00869P0C866 280 aa15.39■□□□□ 0.05
ECHDC1-214ENST00000474289 PSG1P11464 419 aa15.39■□□□□ 0.05
ECHDC1-214ENST00000474289 USF1P22415 310 aaPredicted RBP15.39■□□□□ 0.05
ECHDC1-214ENST00000474289 VDAC2P45880 294 aaPredicted RBP15.39■□□□□ 0.05
ECHDC1-214ENST00000474289 MPV17L2Q567V2 206 aa15.39■□□□□ 0.05
ECHDC1-214ENST00000474289 FAM122AQ96E09 287 aa15.39■□□□□ 0.05
ECHDC1-214ENST00000474289 RTL8AQ9BWD3 113 aa15.39■□□□□ 0.05
ECHDC1-214ENST00000474289 NPVFQ9HCQ7 196 aa15.39■□□□□ 0.05
ECHDC1-214ENST00000474289 DMDP11532 3685 aa15.39■□□□□ 0.05
ECHDC1-214ENST00000474289 C2orf70A6NJV1 201 aa15.38■□□□□ 0.05
ECHDC1-214ENST00000474289 M0R2Z0 102 aa15.38■□□□□ 0.05
ECHDC1-214ENST00000474289 GABRA2P47869 451 aa15.38■□□□□ 0.05
ECHDC1-214ENST00000474289 UBE2G1P62253 170 aa15.38■□□□□ 0.05
ECHDC1-214ENST00000474289 SPATA12Q7Z6I5 190 aa15.38■□□□□ 0.05
ECHDC1-214ENST00000474289 SPACA3Q8IXA5 215 aa15.38■□□□□ 0.05
ECHDC1-214ENST00000474289 HSD17B10Q99714 261 aaKnown RBP15.38■□□□□ 0.05
ECHDC1-214ENST00000474289 IL19Q9UHD0 177 aa15.38■□□□□ 0.05
ECHDC1-214ENST00000474289 POLDIP2Q9Y2S7 368 aa15.38■□□□□ 0.05
ECHDC1-214ENST00000474289 IGKV3D-15A0A087WSY6 115 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms