RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 MARCH11A6NNE9 402 aa15.7■□□□□ 0.1
SNX13-206ENST00000474067 UPK2O00526 184 aa15.7■□□□□ 0.1
SNX13-206ENST00000474067 HPGDSO60760 199 aa15.7■□□□□ 0.1
SNX13-206ENST00000474067 NOL3O60936 208 aaKnown RBP15.7■□□□□ 0.1
SNX13-206ENST00000474067 PGLYRP1O75594 196 aaPredicted RBP15.7■□□□□ 0.1
SNX13-206ENST00000474067 SNAPC5O75971 98 aa15.7■□□□□ 0.1
SNX13-206ENST00000474067 RLN1P04808 185 aa15.7■□□□□ 0.1
SNX13-206ENST00000474067 SYNJ2BPP57105 145 aa15.7■□□□□ 0.1
SNX13-206ENST00000474067 BRWD1-AS2P59051 145 aa15.7■□□□□ 0.1
SNX13-206ENST00000474067 SLC38A6Q8IZM9 456 aa15.7■□□□□ 0.1
SNX13-206ENST00000474067 DGCR14Q96DF8 476 aaKnown RBP15.7■□□□□ 0.1
SNX13-206ENST00000474067 TMEM140Q9NV12 185 aa15.7■□□□□ 0.1
SNX13-206ENST00000474067 RABL2AQ9UBK7 228 aaPredicted RBP15.7■□□□□ 0.1
SNX13-206ENST00000474067 FBXL7Q9UJT9 491 aa15.7■□□□□ 0.1
SNX13-206ENST00000474067 RABL2BQ9UNT1 228 aa15.7■□□□□ 0.1
SNX13-206ENST00000474067 HMX3A6NHT5 357 aa15.69■□□□□ 0.1
SNX13-206ENST00000474067 GGCTO75223 188 aaKnown RBP15.69■□□□□ 0.1
SNX13-206ENST00000474067 OR2J3O76001 311 aa15.69■□□□□ 0.1
SNX13-206ENST00000474067 ELK1P19419 428 aa15.69■□□□□ 0.1
SNX13-206ENST00000474067 UCP3P55916 312 aa15.69■□□□□ 0.1
SNX13-206ENST00000474067 MRPS10P82664 201 aaKnown RBP15.69■□□□□ 0.1
SNX13-206ENST00000474067 CTF1Q16619 201 aa15.69■□□□□ 0.1
SNX13-206ENST00000474067 SGPP2Q8IWX5 399 aa15.69■□□□□ 0.1
SNX13-206ENST00000474067 Q8N402 240 aa15.69■□□□□ 0.1
SNX13-206ENST00000474067 BCL7BQ9BQE9 202 aa15.69■□□□□ 0.1
SNX13-206ENST00000474067 QTRT1Q9BXR0 403 aaKnown RBP15.69■□□□□ 0.1
SNX13-206ENST00000474067 TRBV7-1A0A0A6YYK4 115 aa15.68■□□□□ 0.1
SNX13-206ENST00000474067 S1PR2O95136 353 aa15.68■□□□□ 0.1
SNX13-206ENST00000474067 IL6RP08887 468 aaPredicted RBP15.68■□□□□ 0.1
SNX13-206ENST00000474067 SMIM18P0DKX4 95 aa15.68■□□□□ 0.1
SNX13-206ENST00000474067 CTRB1P17538 263 aa15.68■□□□□ 0.1
SNX13-206ENST00000474067 RNASE10Q5GAN6 216 aaKnown RBP15.68■□□□□ 0.1
SNX13-206ENST00000474067 CTRB2Q6GPI1 263 aa15.68■□□□□ 0.1
SNX13-206ENST00000474067 GTSCR1Q86UQ5 136 aa15.68■□□□□ 0.1
SNX13-206ENST00000474067 ARRDC1Q8N5I2 433 aa15.68■□□□□ 0.1
SNX13-206ENST00000474067 OR1L6Q8NGR2 347 aa15.68■□□□□ 0.1
SNX13-206ENST00000474067 ZNF486Q96H40 463 aaPredicted RBP15.68■□□□□ 0.1
SNX13-206ENST00000474067 GPHA2Q96T91 129 aa15.68■□□□□ 0.1
SNX13-206ENST00000474067 TNCP24821 2201 aa15.67■□□□□ 0.1
SNX13-206ENST00000474067 RGS5O15539 181 aa15.67■□□□□ 0.1
SNX13-206ENST00000474067 ATG12O94817 140 aa15.67■□□□□ 0.1
SNX13-206ENST00000474067 PRH1P02810 166 aa15.67■□□□□ 0.1
SNX13-206ENST00000474067 OR2B8PP59922 312 aa15.67■□□□□ 0.1
SNX13-206ENST00000474067 ZNF45Q02386 682 aa15.67■□□□□ 0.1
SNX13-206ENST00000474067 KLK9Q2XQG4 91 aa15.67■□□□□ 0.1
SNX13-206ENST00000474067 LYSMD2Q8IV50 215 aa15.67■□□□□ 0.1
SNX13-206ENST00000474067 OR1L8Q8NGR8 309 aa15.67■□□□□ 0.1
SNX13-206ENST00000474067 RAB2BQ8WUD1 216 aa15.67■□□□□ 0.1
SNX13-206ENST00000474067 FCAMRQ8WWV6 532 aa15.67■□□□□ 0.1
SNX13-206ENST00000474067 TMEM56Q96MV1 263 aa15.67■□□□□ 0.1
SNX13-206ENST00000474067 WWC2-AS2Q96NR7 200 aa15.67■□□□□ 0.1
SNX13-206ENST00000474067 EXTL2Q9UBQ6 330 aa15.67■□□□□ 0.1
SNX13-206ENST00000474067 KLK9Q9UKQ9 250 aa15.67■□□□□ 0.1
SNX13-206ENST00000474067 PRNDQ9UKY0 176 aa15.67■□□□□ 0.1
SNX13-206ENST00000474067 DNAH3Q8TD57 4116 aa15.66■□□□□ 0.1
SNX13-206ENST00000474067 TRAPPC2P0DI81 140 aa15.66■□□□□ 0.1
SNX13-206ENST00000474067 TRAPPC2BP0DI82 140 aa15.66■□□□□ 0.1
SNX13-206ENST00000474067 DEFA5Q01523 94 aa15.66■□□□□ 0.1
SNX13-206ENST00000474067 SSBP1Q04837 148 aaKnown RBP15.66■□□□□ 0.1
SNX13-206ENST00000474067 FAM106AQ4KMX7 169 aa15.66■□□□□ 0.1
SNX13-206ENST00000474067 OR5B3Q8NH48 314 aa15.66■□□□□ 0.1
SNX13-206ENST00000474067 FXYD6Q9H0Q3 95 aa15.66■□□□□ 0.1
SNX13-206ENST00000474067 U3KQK5 164 aa15.66■□□□□ 0.1
SNX13-206ENST00000474067 SORL1Q92673 2214 aa15.66■□□□□ 0.1
SNX13-206ENST00000474067 RPA2P15927 270 aa15.65■□□□□ 0.1
SNX13-206ENST00000474067 ARL3P36405 182 aa15.65■□□□□ 0.1
SNX13-206ENST00000474067 LPAR6P43657 344 aa15.65■□□□□ 0.1
SNX13-206ENST00000474067 LAX1Q8IWV1 398 aa15.65■□□□□ 0.1
SNX13-206ENST00000474067 DYNLRB2Q8TF09 96 aa15.65■□□□□ 0.1
SNX13-206ENST00000474067 LSM10Q969L4 123 aaKnown RBP15.65■□□□□ 0.1
SNX13-206ENST00000474067 ZMAT4Q9H898 229 aa15.65■□□□□ 0.1
SNX13-206ENST00000474067 LGALS9O00182 355 aa15.64■□□□□ 0.09
SNX13-206ENST00000474067 BMPR1BO00238 502 aa15.64■□□□□ 0.09
SNX13-206ENST00000474067 KRASP01116 189 aa15.64■□□□□ 0.09
SNX13-206ENST00000474067 SERPINE2P07093 398 aa15.64■□□□□ 0.09
SNX13-206ENST00000474067 AREGP15514 252 aa15.64■□□□□ 0.09
SNX13-206ENST00000474067 ALDH3B2P48448 385 aa15.64■□□□□ 0.09
SNX13-206ENST00000474067 TAS2R19P59542 299 aa15.64■□□□□ 0.09
SNX13-206ENST00000474067 GPHB5Q86YW7 130 aa15.64■□□□□ 0.09
SNX13-206ENST00000474067 ATP6V0BQ99437 205 aa15.64■□□□□ 0.09
SNX13-206ENST00000474067 IGLV11-55A0A075B6I3 123 aa15.63■□□□□ 0.09
SNX13-206ENST00000474067 B3GALNT1O75752 331 aa15.63■□□□□ 0.09
SNX13-206ENST00000474067 TRBV12-3P01733 135 aa15.63■□□□□ 0.09
SNX13-206ENST00000474067 PTBP1P26599 531 aaKnown RBP eCLIP15.63■□□□□ 0.092e-13■■■■■ 28.1
SNX13-206ENST00000474067 TMBIM6P55061 237 aa15.63■□□□□ 0.09
SNX13-206ENST00000474067 PHLDA2Q53GA4 152 aa15.63■□□□□ 0.09
SNX13-206ENST00000474067 GDPD1Q8N9F7 314 aa15.63■□□□□ 0.09
SNX13-206ENST00000474067 CCDC71LQ8N9Z2 235 aa15.63■□□□□ 0.09
SNX13-206ENST00000474067 FANCD2OSQ96PS1 177 aa15.63■□□□□ 0.09
SNX13-206ENST00000474067 NAA50Q9GZZ1 169 aaKnown RBP15.63■□□□□ 0.09
SNX13-206ENST00000474067 PALMDQ9NP74 551 aa15.63■□□□□ 0.09
SNX13-206ENST00000474067 TECRQ9NZ01 308 aaKnown RBP15.63■□□□□ 0.09
SNX13-206ENST00000474067 MTFP1Q9UDX5 166 aa15.63■□□□□ 0.09
SNX13-206ENST00000474067 E7EUB6 86 aa15.62■□□□□ 0.09
SNX13-206ENST00000474067 GABARAPH6UMI1 98 aa15.62■□□□□ 0.09
SNX13-206ENST00000474067 CSN3P07498 182 aa15.62■□□□□ 0.09
SNX13-206ENST00000474067 PGAM2P15259 253 aa15.62■□□□□ 0.09
SNX13-206ENST00000474067 C11orf87Q6NUJ2 197 aa15.62■□□□□ 0.09
SNX13-206ENST00000474067 H2BFWTQ7Z2G1 175 aa15.62■□□□□ 0.09
SNX13-206ENST00000474067 TBC1D26Q86UD7 250 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms