RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 HIPK2Q9H2X6 1198 aa14.54□□□□□ -0.08
VARS2-206ENST00000473916 PRNDQ9UKY0 176 aa14.54□□□□□ -0.08
VARS2-206ENST00000473916 FBN2P35556 2912 aa14.54□□□□□ -0.08
VARS2-206ENST00000473916 IGHV1-3A0A0C4DH29 117 aa14.53□□□□□ -0.08
VARS2-206ENST00000473916 TEX50A0A1B0GTY4 177 aa14.53□□□□□ -0.08
VARS2-206ENST00000473916 A1L4Q6 167 aa14.53□□□□□ -0.08
VARS2-206ENST00000473916 RAB19A4D1S5 217 aa14.53□□□□□ -0.08
VARS2-206ENST00000473916 E7EUB6 86 aa14.53□□□□□ -0.08
VARS2-206ENST00000473916 C10orf55Q5SWW7 151 aa14.53□□□□□ -0.08
VARS2-206ENST00000473916 CLDND2Q8NHS1 167 aa14.53□□□□□ -0.08
VARS2-206ENST00000473916 TAF15Q92804 592 aaKnown RBP eCLIP14.53□□□□□ -0.08
VARS2-206ENST00000473916 PCGF1Q9BSM1 259 aa14.53□□□□□ -0.08
VARS2-206ENST00000473916 hCG_1809904A0A1W2PP81 198 aa14.53□□□□□ -0.08
VARS2-206ENST00000473916 A0A1W2PPE2 198 aa14.53□□□□□ -0.08
VARS2-206ENST00000473916 A0A1W2PR64 198 aa14.53□□□□□ -0.08
VARS2-206ENST00000473916 A0A1W2PRV1 198 aa14.53□□□□□ -0.08
VARS2-206ENST00000473916 LY6LH3BQJ8 138 aa14.53□□□□□ -0.08
VARS2-206ENST00000473916 IL34Q6ZMJ4 242 aa14.53□□□□□ -0.08
VARS2-206ENST00000473916 MOB3BQ86TA1 216 aa14.53□□□□□ -0.08
VARS2-206ENST00000473916 OR10W1Q8NGF6 305 aa14.53□□□□□ -0.08
VARS2-206ENST00000473916 CLCC1Q96S66 551 aa14.53□□□□□ -0.08
VARS2-206ENST00000473916 TMEM147Q9BVK8 224 aa14.53□□□□□ -0.08
VARS2-206ENST00000473916 UQCC1Q9NVA1 299 aa14.53□□□□□ -0.08
VARS2-206ENST00000473916 KLF2Q9Y5W3 355 aaPredicted RBP14.53□□□□□ -0.08
VARS2-206ENST00000473916 PRSS46E5RG02 174 aa14.52□□□□□ -0.09
VARS2-206ENST00000473916 SLC25A17O43808 307 aa14.52□□□□□ -0.09
VARS2-206ENST00000473916 EIF3GO75821 320 aaKnown RBP eCLIP14.52□□□□□ -0.09
VARS2-206ENST00000473916 OR8U8P0C7N1 319 aa14.52□□□□□ -0.09
VARS2-206ENST00000473916 RAB5CP51148 216 aa14.52□□□□□ -0.09
VARS2-206ENST00000473916 LMO4P61968 165 aa14.52□□□□□ -0.09
VARS2-206ENST00000473916 LHFPL4Q7Z7J7 247 aa14.52□□□□□ -0.09
VARS2-206ENST00000473916 INSIG2Q9Y5U4 225 aa14.52□□□□□ -0.09
VARS2-206ENST00000473916 CENPEQ02224 2701 aa14.51□□□□□ -0.09
VARS2-206ENST00000473916 C9JQL5 133 aa14.51□□□□□ -0.09
VARS2-206ENST00000473916 M0R1W7 72 aa14.51□□□□□ -0.09
VARS2-206ENST00000473916 TSPAN15O95858 294 aa14.51□□□□□ -0.09
VARS2-206ENST00000473916 CCL20P78556 96 aa14.51□□□□□ -0.09
VARS2-206ENST00000473916 PRCDQ00LT1 54 aa14.51□□□□□ -0.09
VARS2-206ENST00000473916 MRGPRG-AS1Q2M3A8 158 aa14.51□□□□□ -0.09
VARS2-206ENST00000473916 AKR1C8PQ5T2L2 129 aa14.51□□□□□ -0.09
VARS2-206ENST00000473916 ETV3LQ6ZN32 361 aa14.51□□□□□ -0.09
VARS2-206ENST00000473916 VMO1Q7Z5L0 202 aa14.51□□□□□ -0.09
VARS2-206ENST00000473916 RPEQ96AT9 228 aa14.51□□□□□ -0.09
VARS2-206ENST00000473916 PINX1Q96BK5 328 aaKnown RBP14.51□□□□□ -0.09
VARS2-206ENST00000473916 SPOCK3Q9BQ16 436 aa14.51□□□□□ -0.09
VARS2-206ENST00000473916 CELSR1Q9NYQ6 3014 aa14.51□□□□□ -0.09
VARS2-206ENST00000473916 A0A1W2PPI3 338 aa14.51□□□□□ -0.09
VARS2-206ENST00000473916 UMAD1C9J7I0 102 aa14.51□□□□□ -0.09
VARS2-206ENST00000473916 TRIM77I1YAP6 450 aa14.51□□□□□ -0.09
VARS2-206ENST00000473916 CA2P00918 260 aa14.51□□□□□ -0.09
VARS2-206ENST00000473916 ADCYAP1P18509 176 aa14.51□□□□□ -0.09
VARS2-206ENST00000473916 FGF7P21781 194 aa14.51□□□□□ -0.09
VARS2-206ENST00000473916 RAB13P51153 203 aa14.51□□□□□ -0.09
VARS2-206ENST00000473916 ELLP55199 621 aaPredicted RBP14.51□□□□□ -0.09
VARS2-206ENST00000473916 PAX2Q02962 417 aa14.51□□□□□ -0.09
VARS2-206ENST00000473916 VWC2Q2TAL6 325 aa14.51□□□□□ -0.09
VARS2-206ENST00000473916 SSX7Q7RTT5 188 aa14.51□□□□□ -0.09
VARS2-206ENST00000473916 ZNF430Q9H8G1 570 aaPredicted RBP14.51□□□□□ -0.09
VARS2-206ENST00000473916 HILPDAQ9Y5L2 63 aa14.51□□□□□ -0.09
VARS2-206ENST00000473916 CGB1A6NKQ9 187 aa14.5□□□□□ -0.09
VARS2-206ENST00000473916 KRBOX1C9JBD0 128 aa14.5□□□□□ -0.09
VARS2-206ENST00000473916 RPL8P62917 257 aaKnown RBP14.5□□□□□ -0.09
VARS2-206ENST00000473916 CCDC28AQ8IWP9 274 aa14.5□□□□□ -0.09
VARS2-206ENST00000473916 SLC24A4Q8NFF2 622 aa14.5□□□□□ -0.09
VARS2-206ENST00000473916 OR11H6Q8NGC7 330 aa14.5□□□□□ -0.09
VARS2-206ENST00000473916 PARD6GQ9BYG4 376 aaPredicted RBP14.5□□□□□ -0.09
VARS2-206ENST00000473916 PLEKHA3Q9HB20 300 aa14.5□□□□□ -0.09
VARS2-206ENST00000473916 TREM1Q9NP99 234 aa14.5□□□□□ -0.09
VARS2-206ENST00000473916 RPRMQ9NS64 109 aa14.5□□□□□ -0.09
VARS2-206ENST00000473916 ZNF257Q9Y2Q1 563 aa14.5□□□□□ -0.09
VARS2-206ENST00000473916 CHD6Q8TD26 2715 aa14.5□□□□□ -0.09
VARS2-206ENST00000473916 A0A1B0GW64 132 aa14.49□□□□□ -0.09
VARS2-206ENST00000473916 PRTN3P24158 256 aa14.49□□□□□ -0.09
VARS2-206ENST00000473916 MC5RP33032 325 aa14.49□□□□□ -0.09
VARS2-206ENST00000473916 SNCAP37840 140 aa14.49□□□□□ -0.09
VARS2-206ENST00000473916 FBLN7Q53RD9 439 aa14.49□□□□□ -0.09
VARS2-206ENST00000473916 SPSB3Q6PJ21 355 aa14.49□□□□□ -0.09
VARS2-206ENST00000473916 UQCC3Q6UW78 93 aa14.49□□□□□ -0.09
VARS2-206ENST00000473916 TMEM167AQ8TBQ9 72 aa14.49□□□□□ -0.09
VARS2-206ENST00000473916 C17orf50Q8WW18 174 aa14.49□□□□□ -0.09
VARS2-206ENST00000473916 LPAR2Q9HBW0 351 aa14.49□□□□□ -0.09
VARS2-206ENST00000473916 ENY2Q9NPA8 101 aa14.49□□□□□ -0.09
VARS2-206ENST00000473916 IFNA4P05014 189 aa14.49□□□□□ -0.09
VARS2-206ENST00000473916 NPY1RP25929 384 aa14.49□□□□□ -0.09
VARS2-206ENST00000473916 ATP6V1FQ16864 119 aa14.49□□□□□ -0.09
VARS2-206ENST00000473916 TPTE2P1Q5T6R2 138 aa14.49□□□□□ -0.09
VARS2-206ENST00000473916 AIFM2Q9BRQ8 373 aa14.49□□□□□ -0.09
VARS2-206ENST00000473916 PSMG3Q9BT73 122 aaPredicted RBP14.49□□□□□ -0.09
VARS2-206ENST00000473916 SCRT1Q9BWW7 348 aa14.49□□□□□ -0.09
VARS2-206ENST00000473916 AMMECR1Q9Y4X0 333 aaPredicted RBP14.49□□□□□ -0.09
VARS2-206ENST00000473916 TMEM218A2RU14 115 aa14.48□□□□□ -0.09
VARS2-206ENST00000473916 SMCO3A2RU48 225 aa14.48□□□□□ -0.09
VARS2-206ENST00000473916 NUDT19A8MXV4 375 aa14.48□□□□□ -0.09
VARS2-206ENST00000473916 ODF3BA8MYP8 253 aa14.48□□□□□ -0.09
VARS2-206ENST00000473916 RNASEK-C17orf49H0YIS7 233 aa14.48□□□□□ -0.09
VARS2-206ENST00000473916 TIMM23O14925 209 aa14.48□□□□□ -0.09
VARS2-206ENST00000473916 IGKV1D-33P01593 117 aa14.48□□□□□ -0.09
VARS2-206ENST00000473916 IGKV1-33P01594 117 aa14.48□□□□□ -0.09
VARS2-206ENST00000473916 MDKP21741 143 aaPredicted RBP14.48□□□□□ -0.09
VARS2-206ENST00000473916 ZNF726P1Q15940 193 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms