RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 APCP25054 2843 aa5.03□□□□□ -1.6
CLK1-210ENST00000473565 TEX50A0A1B0GTY4 177 aa5.03□□□□□ -1.6
CLK1-210ENST00000473565 BUB1B-PAK6H3BSN5 160 aa5.03□□□□□ -1.6
CLK1-210ENST00000473565 KBTBD11O94819 623 aa5.03□□□□□ -1.6
CLK1-210ENST00000473565 ARG1P05089 322 aa5.03□□□□□ -1.6
CLK1-210ENST00000473565 FGF7P21781 194 aa5.03□□□□□ -1.6
CLK1-210ENST00000473565 F2RL1P55085 397 aa5.03□□□□□ -1.6
CLK1-210ENST00000473565 HSPE1P61604 102 aaKnown RBP5.03□□□□□ -1.6
CLK1-210ENST00000473565 BLOC1S1P78537 153 aa5.03□□□□□ -1.6
CLK1-210ENST00000473565 LRRC75BQ2VPJ9 315 aa5.03□□□□□ -1.6
CLK1-210ENST00000473565 AARDQ4LEZ3 155 aa5.03□□□□□ -1.6
CLK1-210ENST00000473565 ETV3LQ6ZN32 361 aa5.03□□□□□ -1.6
CLK1-210ENST00000473565 C19orf35Q6ZS72 473 aa5.03□□□□□ -1.6
CLK1-210ENST00000473565 OR10P1Q8NGE3 313 aa5.03□□□□□ -1.6
CLK1-210ENST00000473565 C8orf46Q8TAG6 207 aa5.03□□□□□ -1.6
CLK1-210ENST00000473565 TAF15Q92804 592 aaKnown RBP eCLIP5.03□□□□□ -1.6
CLK1-210ENST00000473565 CLCC1Q96S66 551 aa5.03□□□□□ -1.6
CLK1-210ENST00000473565 RPRMQ9NS64 109 aa5.03□□□□□ -1.6
CLK1-210ENST00000473565 FOXA2Q9Y261 457 aaPredicted RBP5.03□□□□□ -1.6
CLK1-210ENST00000473565 WASHC3Q9Y3C0 194 aa5.03□□□□□ -1.6
CLK1-210ENST00000473565 IGHV1-3A0A0C4DH29 117 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 OVOL3O00110 214 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 FSTL3O95633 263 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 CA2P00918 260 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 IGKV1D-33P01593 117 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 IGKV1-33P01594 117 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 IGLV2-23P01705 113 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 IFNA4P05014 189 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 OR8U8P0C7N1 319 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 FGF8P55075 233 aaPredicted RBP5.02□□□□□ -1.61
CLK1-210ENST00000473565 POU2AF1Q16633 256 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 TMEM177Q53S58 311 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 AKR1C8PQ5T2L2 129 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 HCP5Q6MZN7 132 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 ACSM6Q6P461 480 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 ZNF429Q86V71 674 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 CCDC28AQ8IWP9 274 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 EIF4E3Q8N5X7 224 aaKnown RBP5.02□□□□□ -1.61
CLK1-210ENST00000473565 CLDND2Q8NHS1 167 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 GNPNAT1Q96EK6 184 aaPredicted RBP5.02□□□□□ -1.61
CLK1-210ENST00000473565 CIB3Q96Q77 187 aaPredicted RBP5.02□□□□□ -1.61
CLK1-210ENST00000473565 CCL19Q99731 98 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 PCGF1Q9BSM1 259 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 HIPK2Q9H2X6 1198 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 ZNF430Q9H8G1 570 aaPredicted RBP5.02□□□□□ -1.61
CLK1-210ENST00000473565 UQCC1Q9NVA1 299 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 A0A1B0GW64 132 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 A0A1W2PPH5 198 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 FAM90A9PA6NNJ1 464 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 IGHV3-48P01763 117 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 IGHV2-5P01817 119 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 REG1AP05451 166 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 IL6RP08887 468 aaPredicted RBP5.02□□□□□ -1.61
CLK1-210ENST00000473565 ZNF137PP52743 207 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 PRRX1P54821 245 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 RAB2AP61019 212 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 DEFA5Q01523 94 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 ZNF726P1Q15940 193 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 MLANAQ16655 118 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 SPSB3Q6PJ21 355 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 LCN15Q6UWW0 184 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 VMO1Q7Z5L0 202 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 C8orf31Q8N9H6 132 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 OR4C13Q8NGP0 309 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 OSR1Q8TAX0 266 aaPredicted RBP5.02□□□□□ -1.61
CLK1-210ENST00000473565 SFT2D1Q8WV19 159 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 RPEQ96AT9 228 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 TMEM147Q9BVK8 224 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 INSIG2Q9Y5U4 225 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.02□□□□□ -1.614e-7■■■■□ 22.2
CLK1-210ENST00000473565 CSPG4Q6UVK1 2322 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 RAB19A4D1S5 217 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 TIMM23O14925 209 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 M6PRP20645 277 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 NPY1RP25929 384 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 IL3RAP26951 378 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 LGALS4P56470 323 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 LMO4P61968 165 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 GUCA2BQ16661 112 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 GCSAMLQ5JQS6 135 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 DHRS7BQ6IAN0 325 aaPredicted RBP5.02□□□□□ -1.61
CLK1-210ENST00000473565 PDPNQ86YL7 162 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 PUSL1Q8N0Z8 303 aaKnown RBP5.02□□□□□ -1.61
CLK1-210ENST00000473565 DYNAPQ8N1N2 210 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 SLC24A4Q8NFF2 622 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 OR52E5Q8NH55 327 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 PERPQ96FX8 193 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 RARRES2Q99969 163 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 PLEKHA3Q9HB20 300 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 BET1LQ9NYM9 111 aa5.02□□□□□ -1.61
CLK1-210ENST00000473565 TMA7Q9Y2S6 64 aaKnown RBP5.02□□□□□ -1.61
CLK1-210ENST00000473565 A0A1W2PPI3 338 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 TMEM218A2RU14 115 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 CGB1A6NKQ9 187 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 RNASEK-C17orf49H0YIS7 233 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 NUPL2O15504 423 aaKnown RBP5.01□□□□□ -1.61
CLK1-210ENST00000473565 H2AFB1P0C5Y9 115 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 SNCAP37840 140 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 PPT1P50897 306 aa5.01□□□□□ -1.61
CLK1-210ENST00000473565 GNB1P62873 340 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms