RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 J3QR06 171 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 M0R135 149 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 S1PR2O95136 353 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 IAPPP10997 89 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 CLDN15P56746 228 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 RHOBP62745 196 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 GNB1P62873 340 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 MYBPHQ13203 477 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 PIGYQ3MUY2 71 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 RNFT1Q5M7Z0 435 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 RAET1LQ5VY80 246 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 TMEM42Q69YG0 159 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 STUMQ69YW2 141 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 MDS2Q8NDY4 140 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 RAB1CQ92928 201 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 ZNF799Q96GE5 643 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 MDFIQ99750 246 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 TMEM204Q9BSN7 226 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 AKAP6Q13023 2319 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 PHF3Q92576 2039 aaKnown RBP8.45□□□□□ -1.06
APTX-216ENST00000472896 MAP1AP78559 2803 aaPredicted RBP8.45□□□□□ -1.06
APTX-216ENST00000472896 IGKV1-27A0A075B6S5 117 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 FCN1O00602 326 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 TNFSF12O43508 249 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 RAMP3O60896 148 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 TIMP3P35625 211 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 AMTP48728 403 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 LGALS4P56470 323 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 FBXW4P57775 412 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 TFF3Q07654 80 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 DMRTC1Q5HYR2 192 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 C10orf128Q5T292 105 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 Q6ZPA2 131 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 Q71RC1 249 aaPredicted RBP8.45□□□□□ -1.06
APTX-216ENST00000472896 Q8NFD4 153 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 OR10V1Q8NGI7 309 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 OR4P4Q8NGL7 312 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 VKORC1Q9BQB6 163 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 SFXN3Q9BWM7 321 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 CLN8Q9UBY8 286 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 CACNG5Q9UF02 275 aa8.45□□□□□ -1.06
APTX-216ENST00000472896 RBM7Q9Y580 266 aaKnown RBP8.45□□□□□ -1.06
APTX-216ENST00000472896 TRAV9-2A0A087WT02 112 aa8.44□□□□□ -1.06
APTX-216ENST00000472896 IGKV1D-13A0A0B4J2D9 117 aa8.44□□□□□ -1.06
APTX-216ENST00000472896 IGHV3-20A0A0C4DH32 117 aa8.44□□□□□ -1.06
APTX-216ENST00000472896 IGKV1-12A0A0C4DH73 117 aa8.44□□□□□ -1.06
APTX-216ENST00000472896 ZNF324O75467 553 aaPredicted RBP8.44□□□□□ -1.06
APTX-216ENST00000472896 NAPSAO96009 420 aa8.44□□□□□ -1.06
APTX-216ENST00000472896 IGKV1D-12P01611 117 aa8.44□□□□□ -1.06
APTX-216ENST00000472896 IGKV1-13P0DP09 117 aa8.44□□□□□ -1.06
APTX-216ENST00000472896 FBLP22087 321 aaKnown RBP8.44□□□□□ -1.06
APTX-216ENST00000472896 CBLN1P23435 193 aa8.44□□□□□ -1.06
APTX-216ENST00000472896 FKBP2P26885 142 aaKnown RBP8.44□□□□□ -1.06
APTX-216ENST00000472896 CLDN18P56856 261 aa8.44□□□□□ -1.06
APTX-216ENST00000472896 SPINK14Q6IE38 97 aa8.44□□□□□ -1.06
APTX-216ENST00000472896 GATAD1Q8WUU5 269 aa8.44□□□□□ -1.06
APTX-216ENST00000472896 BORCS7Q96B45 105 aa8.44□□□□□ -1.06
APTX-216ENST00000472896 SMR3AQ99954 134 aa8.44□□□□□ -1.06
APTX-216ENST00000472896 NPIPA2E9PIF3 369 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 NBEAP1P0C6P0 100 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 SRD5A2P31213 254 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 CDC34P49427 236 aaPredicted RBP8.43□□□□□ -1.06
APTX-216ENST00000472896 SNAI3Q3KNW1 292 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 SPANXN5Q5MJ07 72 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 LDLRAD2Q5SZI1 272 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 CARD17Q5XLA6 110 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 PRR27Q6MZM9 219 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 VWA1Q6PCB0 445 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 BRICD5Q6PL45 260 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 TCF24Q7RTU0 167 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 UHRF2Q96PU4 802 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 FAM103A1Q9BTL3 118 aaKnown RBP8.43□□□□□ -1.06
APTX-216ENST00000472896 QTRT1Q9BXR0 403 aaKnown RBP8.43□□□□□ -1.06
APTX-216ENST00000472896 GNB4Q9HAV0 340 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 RPH3ALQ9UNE2 315 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 ATP23Q9Y6H3 246 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 TRBV6-6A0A0A6YYG2 114 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 A0A1W2PS18 150 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 FAM90A27PA6NNH2 459 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 SNURFLB1AK76 121 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 M0QZ24 198 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 SH2D1BO14796 132 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 NDUFB4O95168 129 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 C3orf79P0CE67 100 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 CD1BP29016 333 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 OR1C1Q15619 314 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 RSPO1Q2MKA7 263 aaPredicted RBP8.43□□□□□ -1.06
APTX-216ENST00000472896 RPEL1Q2QD12 228 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 VWC2Q2TAL6 325 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 Q6ZRM9 215 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 NIT1Q86X76 327 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 TMEM54Q969K7 222 aa8.43□□□□□ -1.06
APTX-216ENST00000472896 ZNF469Q96JG9 3925 aaPredicted RBP8.42□□□□□ -1.06
APTX-216ENST00000472896 H3BML4 177 aa8.42□□□□□ -1.06
APTX-216ENST00000472896 RBFOX2O43251 390 aaKnown RBP eCLIP8.42□□□□□ -1.06
APTX-216ENST00000472896 SCTP09683 121 aa8.42□□□□□ -1.06
APTX-216ENST00000472896 PSG2P11465 335 aa8.42□□□□□ -1.06
APTX-216ENST00000472896 HTD2P86397 168 aa8.42□□□□□ -1.06
APTX-216ENST00000472896 MYPOPQ86VE0 399 aaPredicted RBP8.42□□□□□ -1.06
APTX-216ENST00000472896 SAXO1Q8IYX7 474 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms