RNA–Protein interactions for RNA: ENST00000472677.1

TRABD-206, Transcript of TraB domain containing, humanhuman

TSL 1 (best)

Gene TRABD, Length 1,661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-206ENST00000472677 FOXL1Q12952 345 aa16.9■□□□□ 0.3
TRABD-206ENST00000472677 FOXRED2Q8IWF2 684 aa16.9■□□□□ 0.3
TRABD-206ENST00000472677 MMD2Q8IY49 270 aa16.9■□□□□ 0.3
TRABD-206ENST00000472677 OR5M8Q8NGP6 311 aa16.9■□□□□ 0.3
TRABD-206ENST00000472677 OR4A5Q8NH83 315 aa16.9■□□□□ 0.3
TRABD-206ENST00000472677 ABHD5Q8WTS1 349 aa16.9■□□□□ 0.3
TRABD-206ENST00000472677 RRNAD1Q96FB5 475 aaKnown RBP16.9■□□□□ 0.3
TRABD-206ENST00000472677 NEURL2Q9BR09 285 aa16.9■□□□□ 0.3
TRABD-206ENST00000472677 C13orf42A0A1B0GVH6 325 aa16.89■□□□□ 0.29
TRABD-206ENST00000472677 C5orf51A6NDU8 294 aa16.89■□□□□ 0.29
TRABD-206ENST00000472677 HLA-GP17693 338 aa16.89■□□□□ 0.29
TRABD-206ENST00000472677 H2BFSP57053 126 aa16.89■□□□□ 0.29
TRABD-206ENST00000472677 FXYD3Q14802 87 aa16.89■□□□□ 0.29
TRABD-206ENST00000472677 TNXAQ16473 311 aa16.89■□□□□ 0.29
TRABD-206ENST00000472677 GGNBP1Q5YKI7 109 aa16.89■□□□□ 0.29
TRABD-206ENST00000472677 ZNF436Q9C0F3 470 aaPredicted RBP16.89■□□□□ 0.29
TRABD-206ENST00000472677 PARP11Q9NR21 331 aa16.89■□□□□ 0.29
TRABD-206ENST00000472677 FBN1P35555 2871 aaKnown RBP16.89■□□□□ 0.29
TRABD-206ENST00000472677 PIGBOS1A0A0B4J2F0 54 aa16.88■□□□□ 0.29
TRABD-206ENST00000472677 CLPSL1A2RUU4 121 aa16.88■□□□□ 0.29
TRABD-206ENST00000472677 MPTX1A8MV57 137 aa16.88■□□□□ 0.29
TRABD-206ENST00000472677 SNAPC5O75971 98 aa16.88■□□□□ 0.29
TRABD-206ENST00000472677 RPL8P62917 257 aaKnown RBP16.88■□□□□ 0.29
TRABD-206ENST00000472677 SERTAD4Q9NUC0 356 aa16.88■□□□□ 0.29
TRABD-206ENST00000472677 LINC00527Q9UJ94 153 aa16.88■□□□□ 0.29
TRABD-206ENST00000472677 TMED3Q9Y3Q3 217 aa16.88■□□□□ 0.29
TRABD-206ENST00000472677 RNF114Q9Y508 228 aa16.88■□□□□ 0.29
TRABD-206ENST00000472677 TRAV3A0A0B4J244 114 aa16.88■□□□□ 0.29
TRABD-206ENST00000472677 DUXBA0A1W2PPF3 345 aa16.88■□□□□ 0.29
TRABD-206ENST00000472677 TMEM89A2RUT3 159 aa16.88■□□□□ 0.29
TRABD-206ENST00000472677 UPK2O00526 184 aa16.88■□□□□ 0.29
TRABD-206ENST00000472677 IGKV1-5P01602 117 aa16.88■□□□□ 0.29
TRABD-206ENST00000472677 MRGPRG-AS1Q2M3A8 158 aa16.88■□□□□ 0.29
TRABD-206ENST00000472677 GSG1LQ6UXU4 331 aa16.88■□□□□ 0.29
TRABD-206ENST00000472677 GRPEL2Q8TAA5 225 aa16.88■□□□□ 0.29
TRABD-206ENST00000472677 PDCD10Q9BUL8 212 aa16.88■□□□□ 0.29
TRABD-206ENST00000472677 RANGRFQ9HD47 186 aaPredicted RBP16.88■□□□□ 0.29
TRABD-206ENST00000472677 A0A1B0GUS0 222 aa16.87■□□□□ 0.29
TRABD-206ENST00000472677 HAX1O00165 279 aa16.87■□□□□ 0.29
TRABD-206ENST00000472677 AP4M1O00189 453 aa16.87■□□□□ 0.29
TRABD-206ENST00000472677 RBMXL2O75526 392 aaKnown RBP16.87■□□□□ 0.29
TRABD-206ENST00000472677 VDAC1P21796 283 aa16.87■□□□□ 0.29
TRABD-206ENST00000472677 CD300CQ08708 224 aa16.87■□□□□ 0.29
TRABD-206ENST00000472677 ARPC1AQ92747 370 aa16.87■□□□□ 0.29
TRABD-206ENST00000472677 ST6GAL2Q96JF0 529 aa16.87■□□□□ 0.29
TRABD-206ENST00000472677 OR10C1Q96KK4 312 aa16.87■□□□□ 0.29
TRABD-206ENST00000472677 NOL4LQ96MY1 436 aaPredicted RBP16.87■□□□□ 0.29
TRABD-206ENST00000472677 NSG2Q9Y328 171 aa16.87■□□□□ 0.29
TRABD-206ENST00000472677 ATP6V0E1O15342 81 aa16.86■□□□□ 0.29
TRABD-206ENST00000472677 IL6RP08887 468 aaPredicted RBP16.86■□□□□ 0.29
TRABD-206ENST00000472677 OR9G9P0C7N8 305 aa16.86■□□□□ 0.29
TRABD-206ENST00000472677 NDPQ00604 133 aa16.86■□□□□ 0.29
TRABD-206ENST00000472677 IZUMO4Q1ZYL8 232 aa16.86■□□□□ 0.29
TRABD-206ENST00000472677 OR4A16Q8NH70 328 aa16.86■□□□□ 0.29
TRABD-206ENST00000472677 WDR89Q96FK6 387 aaPredicted RBP16.86■□□□□ 0.29
TRABD-206ENST00000472677 FAM103A1Q9BTL3 118 aaKnown RBP16.86■□□□□ 0.29
TRABD-206ENST00000472677 MMP24Q9Y5R2 645 aa16.86■□□□□ 0.29
TRABD-206ENST00000472677 OPN1MWP04001 364 aa16.85■□□□□ 0.29
TRABD-206ENST00000472677 OPN1MW2P0DN77 364 aa16.85■□□□□ 0.29
TRABD-206ENST00000472677 OPN1MW3P0DN78 364 aa16.85■□□□□ 0.29
TRABD-206ENST00000472677 MAS1LP35410 378 aa16.85■□□□□ 0.29
TRABD-206ENST00000472677 FYTTD1Q96QD9 318 aaKnown RBP16.85■□□□□ 0.29
TRABD-206ENST00000472677 COMMD5Q9GZQ3 224 aa16.85■□□□□ 0.29
TRABD-206ENST00000472677 A0A0G2JRQ6 117 aa16.85■□□□□ 0.29
TRABD-206ENST00000472677 IGF1P05019 195 aa16.85■□□□□ 0.29
TRABD-206ENST00000472677 GIPP09681 153 aaPredicted RBP16.85■□□□□ 0.29
TRABD-206ENST00000472677 COMPP49747 757 aaPredicted RBP16.85■□□□□ 0.29
TRABD-206ENST00000472677 OR2B8PP59922 312 aa16.85■□□□□ 0.29
TRABD-206ENST00000472677 SSBP2P81877 361 aaPredicted RBP16.85■□□□□ 0.29
TRABD-206ENST00000472677 IAH1Q2TAA2 248 aaPredicted RBP16.85■□□□□ 0.29
TRABD-206ENST00000472677 NMSQ5H8A3 153 aa16.85■□□□□ 0.29
TRABD-206ENST00000472677 CENPVQ7Z7K6 275 aaPredicted RBP16.85■□□□□ 0.29
TRABD-206ENST00000472677 FAM219AQ8IW50 185 aa16.85■□□□□ 0.29
TRABD-206ENST00000472677 LSM10Q969L4 123 aaKnown RBP16.85■□□□□ 0.29
TRABD-206ENST00000472677 PRNDQ9UKY0 176 aa16.85■□□□□ 0.29
TRABD-206ENST00000472677 WSB1Q9Y6I7 421 aa16.85■□□□□ 0.29
TRABD-206ENST00000472677 PLXNB1O43157 2135 aa16.84■□□□□ 0.29
TRABD-206ENST00000472677 AWAT1Q58HT5 328 aa16.84■□□□□ 0.29
TRABD-206ENST00000472677 C10orf55Q5SWW7 151 aa16.84■□□□□ 0.29
TRABD-206ENST00000472677 STPG2Q8N412 459 aa16.84■□□□□ 0.29
TRABD-206ENST00000472677 SRSF12Q8WXF0 261 aaKnown RBP16.84■□□□□ 0.29
TRABD-206ENST00000472677 C2orf50Q96LR7 162 aa16.84■□□□□ 0.29
TRABD-206ENST00000472677 GSKIPQ9P0R6 139 aa16.84■□□□□ 0.29
TRABD-206ENST00000472677 FBXO7Q9Y3I1 522 aa16.84■□□□□ 0.29
TRABD-206ENST00000472677 TET2Q6N021 2002 aaPredicted RBP16.84■□□□□ 0.29
TRABD-206ENST00000472677 MSGN1A6NI15 193 aa16.83■□□□□ 0.28
TRABD-206ENST00000472677 MYOD1P15172 320 aa16.83■□□□□ 0.28
TRABD-206ENST00000472677 TMEM267Q0VDI3 215 aaPredicted RBP16.83■□□□□ 0.28
TRABD-206ENST00000472677 ECSCRQ19T08 205 aa16.83■□□□□ 0.28
TRABD-206ENST00000472677 SGMS2Q8NHU3 365 aa16.83■□□□□ 0.28
TRABD-206ENST00000472677 GPR146Q96CH1 333 aa16.83■□□□□ 0.28
TRABD-206ENST00000472677 GON7Q9BXV9 100 aa16.83■□□□□ 0.28
TRABD-206ENST00000472677 FKBP11Q9NYL4 201 aa16.83■□□□□ 0.28
TRABD-206ENST00000472677 TNCP24821 2201 aa16.83■□□□□ 0.28
TRABD-206ENST00000472677 FGF2P09038 288 aa16.82■□□□□ 0.28
TRABD-206ENST00000472677 P0C879 139 aa16.82■□□□□ 0.28
TRABD-206ENST00000472677 EGR2P11161 476 aaPredicted RBP16.82■□□□□ 0.28
TRABD-206ENST00000472677 RPL27AP46776 148 aaKnown RBP16.82■□□□□ 0.28
TRABD-206ENST00000472677 KLHDC1Q8N7A1 406 aa16.82■□□□□ 0.28
TRABD-206ENST00000472677 LFNGQ8NES3 379 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms