RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 IGHV3-23P01764 117 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 PMP2P02689 132 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 RLN1P04808 185 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 NQO2P16083 231 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 CTRB1P17538 263 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 EDN2P20800 178 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 PRSS3P35030 304 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 MECP2P51608 486 aaKnown RBP6.84□□□□□ -1.31
USF1-204ENST00000472217 TAS2R46P59540 309 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 OR2B8PP59922 312 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 VBP1P61758 197 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 KLK9Q2XQG4 91 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 FAM209BQ5JX69 171 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 CTRB2Q6GPI1 263 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 DHRS11Q6UWP2 260 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 CLEC19AQ6UXS0 136 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 OR2K2Q8NGT1 345 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 OR5H2Q8NGV7 314 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 CD300LFQ8TDQ1 290 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 BORCS5Q969J3 196 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 MOB3AQ96BX8 217 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 TM2D3Q9BRN9 247 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 FXYD6Q9H0Q3 95 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 ZMAT4Q9H898 229 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 PLEKHA2Q9HB19 425 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 TMEM140Q9NV12 185 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 COMMD9Q9P000 198 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 COMMD3Q9UBI1 195 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 KLK9Q9UKQ9 250 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 IGLV11-55A0A075B6I3 123 aa6.83□□□□□ -1.32
USF1-204ENST00000472217 MFSD2BA6NFX1 497 aa6.83□□□□□ -1.32
USF1-204ENST00000472217 MARCH11A6NNE9 402 aa6.83□□□□□ -1.32
USF1-204ENST00000472217 PGLYRP1O75594 196 aaPredicted RBP6.83□□□□□ -1.32
USF1-204ENST00000472217 OR2C1O95371 312 aa6.83□□□□□ -1.32
USF1-204ENST00000472217 DEFA4P12838 97 aa6.83□□□□□ -1.32
USF1-204ENST00000472217 RPA2P15927 270 aa6.83□□□□□ -1.32
USF1-204ENST00000472217 HIST1H1BP16401 226 aaKnown RBP6.83□□□□□ -1.32
USF1-204ENST00000472217 HRH1P35367 487 aa6.83□□□□□ -1.32
USF1-204ENST00000472217 ARL3P36405 182 aa6.83□□□□□ -1.32
USF1-204ENST00000472217 CD300EQ496F6 205 aaPredicted RBP6.83□□□□□ -1.32
USF1-204ENST00000472217 GTSCR1Q86UQ5 136 aa6.83□□□□□ -1.32
USF1-204ENST00000472217 LYSMD2Q8IV50 215 aa6.83□□□□□ -1.32
USF1-204ENST00000472217 DMBX1Q8NFW5 382 aa6.83□□□□□ -1.32
USF1-204ENST00000472217 OR10W1Q8NGF6 305 aa6.83□□□□□ -1.32
USF1-204ENST00000472217 OR6F1Q8NGZ6 308 aa6.83□□□□□ -1.32
USF1-204ENST00000472217 MUC7Q8TAX7 377 aa6.83□□□□□ -1.32
USF1-204ENST00000472217 GPX8Q8TED1 209 aa6.83□□□□□ -1.32
USF1-204ENST00000472217 COMMD5Q9GZQ3 224 aa6.83□□□□□ -1.32
USF1-204ENST00000472217 STAB2Q8WWQ8 2551 aa6.82□□□□□ -1.32
USF1-204ENST00000472217 C2orf70A6NJV1 201 aa6.82□□□□□ -1.32
USF1-204ENST00000472217 C3orf84H3BNL1 204 aa6.82□□□□□ -1.32
USF1-204ENST00000472217 LGALS9O00182 355 aa6.82□□□□□ -1.32
USF1-204ENST00000472217 HPGDSO60760 199 aa6.82□□□□□ -1.32
USF1-204ENST00000472217 APOA1P02647 267 aa6.82□□□□□ -1.32
USF1-204ENST00000472217 FGF2P09038 288 aa6.82□□□□□ -1.32
USF1-204ENST00000472217 FOLR2P14207 255 aa6.82□□□□□ -1.32
USF1-204ENST00000472217 ELK1P19419 428 aa6.82□□□□□ -1.32
USF1-204ENST00000472217 F2RP25116 425 aa6.82□□□□□ -1.32
USF1-204ENST00000472217 HLA-DMAP28067 261 aa6.82□□□□□ -1.32
USF1-204ENST00000472217 LPAR6P43657 344 aa6.82□□□□□ -1.32
USF1-204ENST00000472217 SNX29P2Q8IUI4 249 aa6.82□□□□□ -1.32
USF1-204ENST00000472217 DYNLRB2Q8TF09 96 aa6.82□□□□□ -1.32
USF1-204ENST00000472217 FCAMRQ8WWV6 532 aa6.82□□□□□ -1.32
USF1-204ENST00000472217 CACNG8Q8WXS5 425 aa6.82□□□□□ -1.32
USF1-204ENST00000472217 EEF1AKMT3Q96AZ1 226 aa6.82□□□□□ -1.32
USF1-204ENST00000472217 DGCR14Q96DF8 476 aaKnown RBP6.82□□□□□ -1.32
USF1-204ENST00000472217 CMTM3Q96MX0 182 aa6.82□□□□□ -1.32
USF1-204ENST00000472217 SRSF8Q9BRL6 282 aaKnown RBP6.82□□□□□ -1.32
USF1-204ENST00000472217 QTRT1Q9BXR0 403 aaKnown RBP6.82□□□□□ -1.32
USF1-204ENST00000472217 TRBV7-1A0A0A6YYK4 115 aa6.81□□□□□ -1.32
USF1-204ENST00000472217 TEX50A0A1B0GTY4 177 aa6.81□□□□□ -1.32
USF1-204ENST00000472217 SMIM31A0A1B0GVY4 71 aa6.81□□□□□ -1.32
USF1-204ENST00000472217 ZNF785A8K8V0 405 aa6.81□□□□□ -1.32
USF1-204ENST00000472217 A8MWP6 167 aa6.81□□□□□ -1.32
USF1-204ENST00000472217 GPR31O00270 319 aa6.81□□□□□ -1.32
USF1-204ENST00000472217 KRASP01116 189 aa6.81□□□□□ -1.32
USF1-204ENST00000472217 CD7P09564 240 aa6.81□□□□□ -1.32
USF1-204ENST00000472217 SMIM18P0DKX4 95 aa6.81□□□□□ -1.32
USF1-204ENST00000472217 RCVRNP35243 200 aa6.81□□□□□ -1.32
USF1-204ENST00000472217 CD81P60033 236 aa6.81□□□□□ -1.32
USF1-204ENST00000472217 ERVK-16P61578 105 aa6.81□□□□□ -1.32
USF1-204ENST00000472217 WT1-ASQ06250 92 aa6.81□□□□□ -1.32
USF1-204ENST00000472217 HAGHQ16775 308 aa6.81□□□□□ -1.32
USF1-204ENST00000472217 DEFB114Q30KQ6 69 aa6.81□□□□□ -1.32
USF1-204ENST00000472217 ZNF585BQ52M93 769 aa6.81□□□□□ -1.32
USF1-204ENST00000472217 PHLDA2Q53GA4 152 aa6.81□□□□□ -1.32
USF1-204ENST00000472217 THOC7Q6I9Y2 204 aaKnown RBP6.81□□□□□ -1.32
USF1-204ENST00000472217 GPHB5Q86YW7 130 aa6.81□□□□□ -1.32
USF1-204ENST00000472217 LAX1Q8IWV1 398 aa6.81□□□□□ -1.32
USF1-204ENST00000472217 CMTM1Q8IZ96 169 aa6.81□□□□□ -1.32
USF1-204ENST00000472217 GDPD1Q8N9F7 314 aa6.81□□□□□ -1.32
USF1-204ENST00000472217 ZNF502Q8TBZ5 544 aa6.81□□□□□ -1.32
USF1-204ENST00000472217 WDR89Q96FK6 387 aaPredicted RBP6.81□□□□□ -1.32
USF1-204ENST00000472217 CXorf58Q96LI9 332 aa6.81□□□□□ -1.32
USF1-204ENST00000472217 NEURL2Q9BR09 285 aa6.81□□□□□ -1.32
USF1-204ENST00000472217 NAA50Q9GZZ1 169 aaKnown RBP6.81□□□□□ -1.32
USF1-204ENST00000472217 TUBA4BQ9H853 241 aa6.81□□□□□ -1.32
USF1-204ENST00000472217 PLEKHA3Q9HB20 300 aa6.81□□□□□ -1.32
USF1-204ENST00000472217 SCPEP1Q9HB40 452 aa6.81□□□□□ -1.32
USF1-204ENST00000472217 ZC4H2Q9NQZ6 224 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms