RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 IGLV11-55A0A075B6I3 123 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 TEX50A0A1B0GTY4 177 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 IGLC7A0M8Q6 106 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 FAM223BA6NKX1 122 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 DBX1A6NMT0 343 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 H0Y980 276 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 UPK2O00526 184 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 SCAF4O95104 1147 aaKnown RBP6.05□□□□□ -1.44
USP48-207ENST00000471752 S1PR2O95136 353 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 PPYP01298 95 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 CRYGCP07315 174 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 CTXN2P0C2S0 81 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 CTRB1P17538 263 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 CBLN1P23435 193 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 GNRHRP30968 328 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 CBX3Q13185 183 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 GUCA2BQ16661 112 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 KLK9Q2XQG4 91 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 CTRB2Q6GPI1 263 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 TPRA1Q86W33 373 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 LYSMD2Q8IV50 215 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 FAM223AQ8IWN6 122 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 TMEM61Q8N0U2 210 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 SPAG16Q8N0X2 631 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 Q8N402 240 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 OR13F1Q8NGS4 319 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 SPIN2AQ99865 258 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 SPIN2BQ9BPZ2 258 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 SLC5A7Q9GZV3 580 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 VCX3BQ9H321 246 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 KLK9Q9UKQ9 250 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 BLOC1S6Q9UL45 172 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 NSG2Q9Y328 171 aa6.05□□□□□ -1.44
USP48-207ENST00000471752 ZNF320A2RRD8 509 aa6.04□□□□□ -1.44
USP48-207ENST00000471752 NPIPB5A8MRT5 1133 aa6.04□□□□□ -1.44
USP48-207ENST00000471752 OR11H12B2RN74 326 aa6.04□□□□□ -1.44
USP48-207ENST00000471752 MRPS14O60783 128 aaKnown RBP6.04□□□□□ -1.44
USP48-207ENST00000471752 PMP2P02689 132 aa6.04□□□□□ -1.44
USP48-207ENST00000471752 HLA-GP17693 338 aa6.04□□□□□ -1.44
USP48-207ENST00000471752 ARL3P36405 182 aa6.04□□□□□ -1.44
USP48-207ENST00000471752 ARPC4P59998 168 aa6.04□□□□□ -1.44
USP48-207ENST00000471752 RPL8P62917 257 aaKnown RBP6.04□□□□□ -1.44
USP48-207ENST00000471752 WT1-ASQ06250 92 aa6.04□□□□□ -1.44
USP48-207ENST00000471752 TIMM50Q3ZCQ8 353 aa6.04□□□□□ -1.44
USP48-207ENST00000471752 ZNF585BQ52M93 769 aa6.04□□□□□ -1.44
USP48-207ENST00000471752 TMEM17Q86X19 198 aa6.04□□□□□ -1.44
USP48-207ENST00000471752 UXS1Q8NBZ7 420 aa6.04□□□□□ -1.44
USP48-207ENST00000471752 OR51H1Q8NH63 302 aa6.04□□□□□ -1.44
USP48-207ENST00000471752 OR4S2Q8NH73 311 aa6.04□□□□□ -1.44
USP48-207ENST00000471752 HSD17B10Q99714 261 aaKnown RBP6.04□□□□□ -1.44
USP48-207ENST00000471752 SPATA25Q9BR10 227 aa6.04□□□□□ -1.44
USP48-207ENST00000471752 CHRDL1Q9BU40 450 aa6.04□□□□□ -1.44
USP48-207ENST00000471752 SRD5A3Q9H8P0 318 aa6.04□□□□□ -1.44
USP48-207ENST00000471752 PALMDQ9NP74 551 aa6.04□□□□□ -1.44
USP48-207ENST00000471752 ZNF257Q9Y2Q1 563 aa6.04□□□□□ -1.44
USP48-207ENST00000471752 PRELID3BQ9Y3B1 194 aa6.04□□□□□ -1.44
USP48-207ENST00000471752 CEPT1Q9Y6K0 416 aa6.04□□□□□ -1.44
USP48-207ENST00000471752 F8W735 103 aaPredicted RBP6.03□□□□□ -1.44
USP48-207ENST00000471752 ZNF207O43670 478 aaKnown RBP6.03□□□□□ -1.44
USP48-207ENST00000471752 GGCTO75223 188 aaKnown RBP6.03□□□□□ -1.44
USP48-207ENST00000471752 PGLYRP1O75594 196 aaPredicted RBP6.03□□□□□ -1.44
USP48-207ENST00000471752 ACTL6BO94805 426 aa6.03□□□□□ -1.44
USP48-207ENST00000471752 IGHV3-48P01763 117 aa6.03□□□□□ -1.44
USP48-207ENST00000471752 GPR183P32249 361 aa6.03□□□□□ -1.44
USP48-207ENST00000471752 LPAR6P43657 344 aa6.03□□□□□ -1.44
USP48-207ENST00000471752 ZNF124Q15973 351 aa6.03□□□□□ -1.44
USP48-207ENST00000471752 TATDN3Q17R31 274 aa6.03□□□□□ -1.44
USP48-207ENST00000471752 LCN12Q6JVE5 192 aa6.03□□□□□ -1.44
USP48-207ENST00000471752 BTNL8Q6UX41 500 aa6.03□□□□□ -1.44
USP48-207ENST00000471752 ZNF66Q6ZN08 573 aa6.03□□□□□ -1.44
USP48-207ENST00000471752 GPHB5Q86YW7 130 aa6.03□□□□□ -1.44
USP48-207ENST00000471752 ZNF502Q8TBZ5 544 aa6.03□□□□□ -1.44
USP48-207ENST00000471752 GIMAP1Q8WWP7 306 aa6.03□□□□□ -1.44
USP48-207ENST00000471752 FCAMRQ8WWV6 532 aa6.03□□□□□ -1.44
USP48-207ENST00000471752 YIPF6Q96EC8 236 aa6.03□□□□□ -1.44
USP48-207ENST00000471752 YTHDF1Q9BYJ9 559 aaKnown RBP6.03□□□□□ -1.44
USP48-207ENST00000471752 HRASLSQ9HDD0 168 aa6.03□□□□□ -1.44
USP48-207ENST00000471752 TMEM140Q9NV12 185 aa6.03□□□□□ -1.44
USP48-207ENST00000471752 HERC2O95714 4834 aa6.02□□□□□ -1.44
USP48-207ENST00000471752 DNAH6Q9C0G6 4158 aa6.02□□□□□ -1.45
USP48-207ENST00000471752 DPPA5A6NC42 116 aa6.02□□□□□ -1.45
USP48-207ENST00000471752 LGALS9O00182 355 aa6.02□□□□□ -1.45
USP48-207ENST00000471752 XRCC3O43542 346 aa6.02□□□□□ -1.45
USP48-207ENST00000471752 SLC22A5O76082 557 aa6.02□□□□□ -1.45
USP48-207ENST00000471752 IGKV1-39P01597 117 aa6.02□□□□□ -1.45
USP48-207ENST00000471752 IGKV1D-39P04432 117 aa6.02□□□□□ -1.45
USP48-207ENST00000471752 RLN1P04808 185 aa6.02□□□□□ -1.45
USP48-207ENST00000471752 EIF4EP06730 217 aaKnown RBP6.02□□□□□ -1.45
USP48-207ENST00000471752 C8orf88P0DMB2 117 aa6.02□□□□□ -1.45
USP48-207ENST00000471752 OR13C7P0DN81 318 aa6.02□□□□□ -1.45
USP48-207ENST00000471752 HLA-DMAP28067 261 aa6.02□□□□□ -1.45
USP48-207ENST00000471752 ADMP35318 185 aa6.02□□□□□ -1.45
USP48-207ENST00000471752 G6PCP35575 357 aa6.02□□□□□ -1.45
USP48-207ENST00000471752 TAS2R20P59543 309 aa6.02□□□□□ -1.45
USP48-207ENST00000471752 IZUMO4Q1ZYL8 232 aa6.02□□□□□ -1.45
USP48-207ENST00000471752 DHRS11Q6UWP2 260 aa6.02□□□□□ -1.45
USP48-207ENST00000471752 GTSCR1Q86UQ5 136 aa6.02□□□□□ -1.45
USP48-207ENST00000471752 OR5AP2Q8NGF4 316 aa6.02□□□□□ -1.45
USP48-207ENST00000471752 DYNLRB2Q8TF09 96 aa6.02□□□□□ -1.45
USP48-207ENST00000471752 ISOC1Q96CN7 298 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms