RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 H3BRM9 83 aa7.23□□□□□ -1.25
CD47-204ENST00000471694 TEX45Q8NA69 505 aa7.23□□□□□ -1.25
CD47-204ENST00000471694 A8MWL6 223 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 IQCF6A8MYZ5 107 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 SLC25A20O43772 301 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 PGLYRP1O75594 196 aaPredicted RBP7.22□□□□□ -1.25
CD47-204ENST00000471694 ERGP11308 486 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 HOGA1Q86XE5 327 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 FAM90A10PA6NDY2 464 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 FAM90A18PA6NE21 464 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 FAM90A16PA6NEW6 464 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 FAM90A20PA6NIJ5 464 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 FAM90A8PA6NJQ4 464 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 FAM90A7PA6NKC0 464 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 FAM90A22PA8MWA6 464 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 FAM90A12PA8MX19 464 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 FAM90A5PA8MXJ8 464 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 FAM90A23PA8MXZ1 464 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 FAM90A15PP0C7V4 464 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 FAM90A13PP0C7W8 464 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 FAM90A14PP0C7W9 464 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 FAM90A24PP0C7X0 464 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 NMUP48645 174 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 ICAM4Q14773 271 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 C2orf68Q2NKX9 166 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 CLRN3Q8NCR9 226 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 UBE2E2Q96LR5 201 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 AURKAIP1Q9NWT8 199 aaPredicted RBP7.22□□□□□ -1.25
CD47-204ENST00000471694 PGA5P0DJD9 388 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 GATA3P23771 443 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 RPL29P47914 159 aaKnown RBP7.22□□□□□ -1.25
CD47-204ENST00000471694 APOC4P55056 127 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 DMKNQ6E0U4 476 aaPredicted RBP7.22□□□□□ -1.25
CD47-204ENST00000471694 ZNF329Q86UD4 541 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 FGFRL1Q8N441 504 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 TTC9CQ8N5M4 171 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 PRDM13Q9H4Q3 707 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 RBBP6Q7Z6E9 1792 aaKnown RBP7.22□□□□□ -1.25
CD47-204ENST00000471694 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.22□□□□□ -1.25
CD47-204ENST00000471694 GREM1O60565 184 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 ZNF253O75346 499 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 VENTXO95231 258 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 MPC2O95563 127 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 CNTFRP26992 372 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 FOXB2Q5VYV0 432 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 KNTC1P50748 2209 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 TRAV9-2A0A087WT02 112 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 ADARB2-AS1A8MUL3 147 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 CD8AP01732 235 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 IER3P46695 156 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 FAM71F2Q6NXP2 309 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 VAX2Q9UIW0 290 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 CTXND1A0A1B0GTU2 59 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 IGHV1-46P01743 117 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 IGHV3-53P01767 116 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 HLA-DRB1P01911 266 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 ACTL10Q5JWF8 245 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 CYP2G1PQ6ZSU1 146 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 C1QTNF4Q9BXJ3 329 aa7.22□□□□□ -1.25
CD47-204ENST00000471694 TRGV11A0A075B6L2 103 aa7.21□□□□□ -1.25
CD47-204ENST00000471694 TRAV8-7A0A075B6U6 113 aa7.21□□□□□ -1.25
CD47-204ENST00000471694 RBFOX3A6NFN3 312 aa7.21□□□□□ -1.25
CD47-204ENST00000471694 DNAL4O96015 105 aa7.21□□□□□ -1.25
CD47-204ENST00000471694 SEC11BP0C7V7 166 aa7.21□□□□□ -1.25
CD47-204ENST00000471694 GALP22466 123 aa7.21□□□□□ -1.25
CD47-204ENST00000471694 RUSC1-AS1Q66K80 236 aa7.21□□□□□ -1.25
CD47-204ENST00000471694 OSR1Q8TAX0 266 aaPredicted RBP7.21□□□□□ -1.25
CD47-204ENST00000471694 NRN1Q9NPD7 142 aa7.21□□□□□ -1.25
CD47-204ENST00000471694 DEPPQ9NTK1 212 aa7.21□□□□□ -1.25
CD47-204ENST00000471694 TCF19Q9Y242 345 aa7.21□□□□□ -1.25
CD47-204ENST00000471694 ELOA3CA0A087WX78 387 aaPredicted RBP7.21□□□□□ -1.25
CD47-204ENST00000471694 PTBP3O95758 552 aaKnown RBP7.21□□□□□ -1.25
CD47-204ENST00000471694 FOXC2Q99958 501 aa7.21□□□□□ -1.25
CD47-204ENST00000471694 PDCD11Q14690 1871 aaKnown RBP7.21□□□□□ -1.26
CD47-204ENST00000471694 TRBV20OR9-2A0A075B6H5 130 aa7.21□□□□□ -1.26
CD47-204ENST00000471694 RBMY1BA6NDE4 496 aaKnown RBP7.21□□□□□ -1.26
CD47-204ENST00000471694 RBMY1EA6NEQ0 496 aaKnown RBP7.21□□□□□ -1.26
CD47-204ENST00000471694 F5H768 121 aa7.21□□□□□ -1.26
CD47-204ENST00000471694 GCM2O75603 506 aaPredicted RBP7.21□□□□□ -1.26
CD47-204ENST00000471694 RBMY1DP0C7P1 496 aaKnown RBP7.21□□□□□ -1.26
CD47-204ENST00000471694 RBMY1A1P0DJD3 496 aaKnown RBP7.21□□□□□ -1.26
CD47-204ENST00000471694 RBMY1CP0DJD4 496 aa7.21□□□□□ -1.26
CD47-204ENST00000471694 ELOBQ15370 118 aa7.21□□□□□ -1.26
CD47-204ENST00000471694 MSRB3Q8IXL7 192 aa7.21□□□□□ -1.26
CD47-204ENST00000471694 ABHD1Q96SE0 405 aa7.21□□□□□ -1.26
CD47-204ENST00000471694 FAM206AQ9NX38 181 aa7.21□□□□□ -1.26
CD47-204ENST00000471694 LRRC37AA6NMS7 1700 aa7.21□□□□□ -1.26
CD47-204ENST00000471694 DAD1P61803 113 aa7.21□□□□□ -1.26
CD47-204ENST00000471694 RPS11P62280 158 aaKnown RBP eCLIP7.21□□□□□ -1.26
CD47-204ENST00000471694 HAPLN4Q86UW8 402 aa7.21□□□□□ -1.26
CD47-204ENST00000471694 DTX1Q86Y01 620 aa7.21□□□□□ -1.26
CD47-204ENST00000471694 FAM90A1Q86YD7 464 aa7.21□□□□□ -1.26
CD47-204ENST00000471694 GATA6Q92908 595 aa7.21□□□□□ -1.26
CD47-204ENST00000471694 NUDT11Q96G61 164 aa7.21□□□□□ -1.26
CD47-204ENST00000471694 REG4Q9BYZ8 158 aa7.21□□□□□ -1.26
CD47-204ENST00000471694 PARP14Q460N5 1801 aa7.21□□□□□ -1.26
CD47-204ENST00000471694 TRAV8-6A0A0B4J262 113 aa7.21□□□□□ -1.26
CD47-204ENST00000471694 TRAV34A0A0B4J273 112 aa7.21□□□□□ -1.26
CD47-204ENST00000471694 ANKRD20A5PA0PJZ0 165 aa7.21□□□□□ -1.26
CD47-204ENST00000471694 ZFP30Q9Y2G7 519 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms