RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 PPP1R27Q86WC6 154 aa5.89□□□□□ -1.47
BRCA1-210ENST00000471181 PLA2G2FQ9BZM2 168 aa5.89□□□□□ -1.47
BRCA1-210ENST00000471181 RPP21Q9H633 154 aaKnown RBP5.89□□□□□ -1.47
BRCA1-210ENST00000471181 MRPS18BQ9Y676 258 aaKnown RBP5.89□□□□□ -1.47
BRCA1-210ENST00000471181 LAMB1P07942 1786 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 CD5LO43866 347 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 LIFP15018 202 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 C11orf44Q8N8P7 122 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 ZNF385AQ96PM9 386 aaKnown RBP5.88□□□□□ -1.47
BRCA1-210ENST00000471181 TMEM222Q9H0R3 208 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 GON4LQ3T8J9 2241 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 IGHV1-69-2A0A0G2JMI3 117 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 C21orf140B9A014 251 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 RND3P61587 244 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 EGR4Q05215 589 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 TBR1Q16650 682 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 DNM1P46Q6ZS02 220 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 OR13A1Q8NGR1 328 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 MYEOVQ96EZ4 313 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 SMDT1Q9H4I9 107 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 PLSCR4Q9NRQ2 329 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 WBP1LQ9NX94 342 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 NUP98P52948 1817 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 A0A1B0GTL3 188 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 FOXH1O75593 365 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 IGKV1D-33P01593 117 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 IGKV1-33P01594 117 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 IL6RP08887 468 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-210ENST00000471181 CXCL2P19875 107 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 UCNP55089 124 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 CD300EQ496F6 205 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-210ENST00000471181 GAGE13Q4V321 117 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 TIMM23BQ5SRD1 257 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 MORN3Q6PF18 240 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-210ENST00000471181 OR9G1Q8NH87 305 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 FMC1Q96HJ9 113 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 RPRMQ9NS64 109 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 RNF115Q9Y4L5 304 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 V9GYH0 126 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 A0A087WX48 190 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 MARCH11A6NNE9 402 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 UPK3AO75631 287 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 CLPSP04118 112 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 CCL1P22362 96 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 FGF12P61328 243 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 TNFRSF9Q07011 255 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 XAF1Q6GPH4 301 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 NR2C2APQ86WQ0 139 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 GSN-AS1Q9NRJ2 163 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 ANKRD31Q8N7Z5 1873 aa5.88□□□□□ -1.47
BRCA1-210ENST00000471181 DPM2O94777 84 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 ERVK11-1P61568 191 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 ZNF146Q15072 292 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 ATG4DQ86TL0 474 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-210ENST00000471181 ORMDL3Q8N138 153 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 COQ2Q96H96 371 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 TRAV8-3A0A0A6YYJ7 113 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 TRAV41A0A0B4J266 112 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 IGHV1OR15-9A0A0B4J2B8 117 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 A0A1B0GUT8 65 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 TCRBV4S1A1TA0A5B7 111 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 CGAP01215 116 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 HOXD4P09016 255 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-210ENST00000471181 CGB3P0DN86 165 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 PRB4P10163 310 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-210ENST00000471181 GLIPR1P48060 266 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 PGFP49763 221 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 SRSF1Q07955 248 aaKnown RBP eCLIP5.87□□□□□ -1.47
BRCA1-210ENST00000471181 TCTEX1D4Q5JR98 221 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 FAM209AQ5JX71 171 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 PRADC1Q9BSG0 188 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 SFXN3Q9BWM7 321 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 KLF12Q9Y4X4 402 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 A0A0G2JLM5 398 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-210ENST00000471181 IFNL4K9M1U5 179 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 SRD5A1P18405 259 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 IL11P20809 199 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 PSG4Q00888 419 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 HS3ST3B1Q9Y662 390 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 SAMD5Q5TGI4 173 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 C2orf82Q6UX34 121 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 LINC01560Q8TB33 94 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 HIST1H2BAQ96A08 127 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 ZNF479Q96JC4 524 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 SNHG12Q9BXW3 62 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 IL36BQ9NZH7 164 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 SCO2A0A1W2PP80 73 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 A0A1W2PQD3 144 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 ODAMA1E959 279 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 IGKCP01834 107 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 PRB1P04280 392 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 PPIFP30405 207 aaKnown RBP5.87□□□□□ -1.47
BRCA1-210ENST00000471181 DRD3P35462 400 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 TCF19Q9Y242 345 aa5.87□□□□□ -1.47
BRCA1-210ENST00000471181 NDUFA2O43678 99 aa5.86□□□□□ -1.47
BRCA1-210ENST00000471181 IGHV3-53P01767 116 aa5.86□□□□□ -1.47
BRCA1-210ENST00000471181 ANXA2RQ3ZCQ2 193 aa5.86□□□□□ -1.47
BRCA1-210ENST00000471181 RPL39P5Q59GN2 51 aa5.86□□□□□ -1.47
BRCA1-210ENST00000471181 GDF15Q99988 308 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms