RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 M0R1X1 148 aa4.92□□□□□ -1.62
PTCD3-208ENST00000469585 SULT1C2O00338 296 aa4.92□□□□□ -1.62
PTCD3-208ENST00000469585 CNIH1O95406 144 aa4.92□□□□□ -1.62
PTCD3-208ENST00000469585 SCTP09683 121 aa4.92□□□□□ -1.62
PTCD3-208ENST00000469585 OR8U9P0C7N5 309 aa4.92□□□□□ -1.62
PTCD3-208ENST00000469585 GSTT2BP0CG30 244 aa4.92□□□□□ -1.62
PTCD3-208ENST00000469585 SAA2P0DJI9 122 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-208ENST00000469585 MDKP21741 143 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-208ENST00000469585 FAUP35544 74 aaKnown RBP4.92□□□□□ -1.62
PTCD3-208ENST00000469585 KIR2DS2P43631 304 aa4.92□□□□□ -1.62
PTCD3-208ENST00000469585 ZNF137PP52743 207 aa4.92□□□□□ -1.62
PTCD3-208ENST00000469585 EFNB2P52799 333 aa4.92□□□□□ -1.62
PTCD3-208ENST00000469585 ERVK-16P61578 105 aa4.92□□□□□ -1.62
PTCD3-208ENST00000469585 TMEM267Q0VDI3 215 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-208ENST00000469585 HERPUD1Q15011 391 aa4.92□□□□□ -1.62
PTCD3-208ENST00000469585 VMA21Q3ZAQ7 101 aa4.92□□□□□ -1.62
PTCD3-208ENST00000469585 ZNF880Q6PDB4 577 aa4.92□□□□□ -1.62
PTCD3-208ENST00000469585 Q6ZS49 121 aa4.92□□□□□ -1.62
PTCD3-208ENST00000469585 SLC35E3Q7Z769 313 aa4.92□□□□□ -1.62
PTCD3-208ENST00000469585 PDPNQ86YL7 162 aa4.92□□□□□ -1.62
PTCD3-208ENST00000469585 COMMD1Q8N668 190 aa4.92□□□□□ -1.62
PTCD3-208ENST00000469585 OR8U1Q8NH10 309 aa4.92□□□□□ -1.62
PTCD3-208ENST00000469585 VSTM2AQ8TAG5 236 aa4.92□□□□□ -1.62
PTCD3-208ENST00000469585 C17orf50Q8WW18 174 aa4.92□□□□□ -1.62
PTCD3-208ENST00000469585 FCAMRQ8WWV6 532 aa4.92□□□□□ -1.62
PTCD3-208ENST00000469585 FLYWCH2Q96CP2 140 aaKnown RBP4.92□□□□□ -1.62
PTCD3-208ENST00000469585 RNF5Q99942 180 aa4.92□□□□□ -1.62
PTCD3-208ENST00000469585 HDHD3Q9BSH5 251 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-208ENST00000469585 RNF167Q9H6Y7 350 aa4.92□□□□□ -1.62
PTCD3-208ENST00000469585 TAS2R8Q9NYW2 309 aa4.92□□□□□ -1.62
PTCD3-208ENST00000469585 EHFQ9NZC4 300 aa4.92□□□□□ -1.62
PTCD3-208ENST00000469585 CCDC59Q9P031 241 aaKnown RBP4.92□□□□□ -1.62
PTCD3-208ENST00000469585 ZNF581Q9P0T4 197 aa4.92□□□□□ -1.62
PTCD3-208ENST00000469585 ANXA10Q9UJ72 324 aa4.92□□□□□ -1.62
PTCD3-208ENST00000469585 TRBV6-7A0A0A0MS04 114 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 IGHV3-72A0A0B4J1Y9 119 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 PIGBOS1A0A0B4J2F0 54 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 A0A1W2PPQ1 181 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 NBR2O15453 112 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 CYB5BO43169 146 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 ATG12O94817 140 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 GSTT2P0CG29 244 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 CD24P25063 80 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 LGALS7P47929 136 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 TMEM50BP56557 158 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 TAS2R20P59543 309 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 AP3S2P59780 193 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 IL18Q14116 193 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 GNMTQ14749 295 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 CDK10Q15131 360 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 VWC2Q2TAL6 325 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 MOGAT2Q3SYC2 334 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 CT45A1Q5HYN5 189 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 SPANXN2Q5MJ10 180 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 KCTD9Q7L273 389 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 SNX29P2Q8IUI4 249 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 KLHDC1Q8N7A1 406 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 ZNF645Q8N7E2 425 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 OR4F17Q8NGA8 305 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 OR5AP2Q8NGF4 316 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 OR6F1Q8NGZ6 308 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 CT45A3Q8NHU0 189 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 MCFD2Q8NI22 146 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 LINC01006Q8NI28 216 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 CD300LFQ8TDQ1 290 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 MAFIPQ8WZ33 124 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 DIRAS2Q96HU8 199 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 OR4F4Q96R69 305 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 PHB2Q99623 299 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 HSD17B10Q99714 261 aaKnown RBP4.91□□□□□ -1.62
PTCD3-208ENST00000469585 CABLES2Q9BTV7 478 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 MRPL20Q9BYC9 149 aaKnown RBP4.91□□□□□ -1.62
PTCD3-208ENST00000469585 AUNIPQ9H7T9 357 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 SDF2L1Q9HCN8 221 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 SLC35D1Q9NTN3 355 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 OR1A1Q9P1Q5 309 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 EXTL2Q9UBQ6 330 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 RSL24D1Q9UHA3 163 aaKnown RBP4.91□□□□□ -1.62
PTCD3-208ENST00000469585 ZNF230Q9UIE0 474 aaPredicted RBP4.91□□□□□ -1.62
PTCD3-208ENST00000469585 SOX21Q9Y651 276 aaPredicted RBP4.91□□□□□ -1.62
PTCD3-208ENST00000469585 DSCAML1Q8TD84 2053 aa4.91□□□□□ -1.62
PTCD3-208ENST00000469585 VPS13CQ709C8 3753 aa4.9□□□□□ -1.62
PTCD3-208ENST00000469585 TCRBV4S1A1TA0A5B7 111 aa4.9□□□□□ -1.63
PTCD3-208ENST00000469585 PSMB11A5LHX3 300 aa4.9□□□□□ -1.63
PTCD3-208ENST00000469585 ZNF736B4DX44 427 aaPredicted RBP4.9□□□□□ -1.63
PTCD3-208ENST00000469585 LY6LH3BQJ8 138 aa4.9□□□□□ -1.63
PTCD3-208ENST00000469585 HPGDSO60760 199 aa4.9□□□□□ -1.63
PTCD3-208ENST00000469585 HRASP01112 189 aa4.9□□□□□ -1.63
PTCD3-208ENST00000469585 TSHBP01222 138 aa4.9□□□□□ -1.63
PTCD3-208ENST00000469585 SMIM18P0DKX4 95 aa4.9□□□□□ -1.63
PTCD3-208ENST00000469585 PGAM2P15259 253 aa4.9□□□□□ -1.63
PTCD3-208ENST00000469585 TBPP20226 339 aa4.9□□□□□ -1.63
PTCD3-208ENST00000469585 FCGR2CP31995 323 aa4.9□□□□□ -1.63
PTCD3-208ENST00000469585 ALDH3B2P48448 385 aa4.9□□□□□ -1.63
PTCD3-208ENST00000469585 FXYD4P59646 89 aa4.9□□□□□ -1.63
PTCD3-208ENST00000469585 SSBP1Q04837 148 aaKnown RBP4.9□□□□□ -1.63
PTCD3-208ENST00000469585 MEF2DQ14814 521 aa4.9□□□□□ -1.63
PTCD3-208ENST00000469585 RNASE10Q5GAN6 216 aaKnown RBP4.9□□□□□ -1.63
PTCD3-208ENST00000469585 CST9LP1Q5W188 147 aa4.9□□□□□ -1.63
PTCD3-208ENST00000469585 FAM131AQ6UXB0 335 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms