RNA–Protein interactions for RNA: ENST00000469543.5

VIM-203, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 2,666 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-203ENST00000469543 OR4A8P0C604 315 aa15.66■□□□□ 0.1
VIM-203ENST00000469543 REG1BP48304 166 aa15.66■□□□□ 0.1
VIM-203ENST00000469543 BSPH1Q075Z2 132 aa15.66■□□□□ 0.1
VIM-203ENST00000469543 NAT8Q9UHE5 227 aa15.66■□□□□ 0.1
VIM-203ENST00000469543 S100A9P06702 114 aaKnown RBP15.65■□□□□ 0.1
VIM-203ENST00000469543 BSXQ3C1V8 233 aa15.65■□□□□ 0.1
VIM-203ENST00000469543 ZNF788Q6ZQV5 615 aa15.65■□□□□ 0.1
VIM-203ENST00000469543 GPR61Q9BZJ8 451 aa15.65■□□□□ 0.1
VIM-203ENST00000469543 SEPSECSQ9HD40 501 aaKnown RBP15.65■□□□□ 0.1
VIM-203ENST00000469543 MBP02144 154 aa15.65■□□□□ 0.1
VIM-203ENST00000469543 ADIPOQQ15848 244 aa15.65■□□□□ 0.1
VIM-203ENST00000469543 SPATA31B1PQ5VZV4 182 aa15.65■□□□□ 0.1
VIM-203ENST00000469543 C17orf112F2Z3M2 114 aa15.64■□□□□ 0.09
VIM-203ENST00000469543 HOXA5P20719 270 aa15.64■□□□□ 0.09
VIM-203ENST00000469543 AARDQ4LEZ3 155 aa15.64■□□□□ 0.09
VIM-203ENST00000469543 CYP2G1PQ6ZSU1 146 aa15.64■□□□□ 0.09
VIM-203ENST00000469543 Q8NA96 180 aa15.64■□□□□ 0.09
VIM-203ENST00000469543 CCL17Q92583 94 aa15.64■□□□□ 0.09
VIM-203ENST00000469543 NEUROG1Q92886 237 aa15.64■□□□□ 0.09
VIM-203ENST00000469543 A0A1W2PPV4 95 aa15.64■□□□□ 0.09
VIM-203ENST00000469543 THBDP07204 575 aa15.64■□□□□ 0.09
VIM-203ENST00000469543 CT45A6P0DMU7 189 aa15.64■□□□□ 0.09
VIM-203ENST00000469543 CT45A5P0DMU8 189 aa15.64■□□□□ 0.09
VIM-203ENST00000469543 CT45A7P0DMV0 189 aa15.64■□□□□ 0.09
VIM-203ENST00000469543 RND2P52198 227 aa15.64■□□□□ 0.09
VIM-203ENST00000469543 PRB3Q04118 309 aaPredicted RBP15.64■□□□□ 0.09
VIM-203ENST00000469543 DIAPH2-AS1Q14236 149 aa15.64■□□□□ 0.09
VIM-203ENST00000469543 C1orf87Q8N0U7 546 aa15.64■□□□□ 0.09
VIM-203ENST00000469543 ZNF439Q8NDP4 499 aa15.64■□□□□ 0.09
VIM-203ENST00000469543 OR4S2Q8NH73 311 aa15.64■□□□□ 0.09
VIM-203ENST00000469543 IDI2-AS1Q9NZ38 188 aa15.64■□□□□ 0.09
VIM-203ENST00000469543 PXMP4Q9Y6I8 212 aa15.64■□□□□ 0.09
VIM-203ENST00000469543 NDUFB4O95168 129 aa15.63■□□□□ 0.09
VIM-203ENST00000469543 CA2P00918 260 aa15.63■□□□□ 0.09
VIM-203ENST00000469543 S100A8P05109 93 aa15.63■□□□□ 0.09
VIM-203ENST00000469543 ARL14EPLP0DKL9 152 aa15.63■□□□□ 0.09
VIM-203ENST00000469543 PRSS8Q16651 343 aa15.63■□□□□ 0.09
VIM-203ENST00000469543 ACOT6Q3I5F7 207 aaPredicted RBP15.63■□□□□ 0.09
VIM-203ENST00000469543 PDLIM3Q53GG5 364 aaPredicted RBP15.63■□□□□ 0.09
VIM-203ENST00000469543 GGTLC1Q9BX51 225 aa15.63■□□□□ 0.09
VIM-203ENST00000469543 GSN-AS1Q9NRJ2 163 aa15.63■□□□□ 0.09
VIM-203ENST00000469543 C15orf61A6NNL5 157 aa15.63■□□□□ 0.09
VIM-203ENST00000469543 LINC00587B1AMM8 73 aa15.63■□□□□ 0.09
VIM-203ENST00000469543 C16orf97H3BN30 126 aa15.63■□□□□ 0.09
VIM-203ENST00000469543 RBFOX2O43251 390 aaKnown RBP eCLIP15.63■□□□□ 0.09
VIM-203ENST00000469543 FOXH1O75593 365 aa15.63■□□□□ 0.09
VIM-203ENST00000469543 HNF1AP20823 631 aa15.63■□□□□ 0.09
VIM-203ENST00000469543 GNB1P62873 340 aa15.63■□□□□ 0.09
VIM-203ENST00000469543 ZNF114Q8NC26 417 aa15.63■□□□□ 0.09
VIM-203ENST00000469543 TMEM242Q9NWH2 141 aa15.63■□□□□ 0.09
VIM-203ENST00000469543 GATA2P23769 480 aaPredicted RBP15.62■□□□□ 0.09
VIM-203ENST00000469543 CHRNA7P36544 502 aa15.62■□□□□ 0.09
VIM-203ENST00000469543 DLX1P56177 255 aa15.62■□□□□ 0.09
VIM-203ENST00000469543 KRTCAP3Q53RY4 240 aa15.62■□□□□ 0.09
VIM-203ENST00000469543 TMEM108Q6UXF1 575 aa15.62■□□□□ 0.09
VIM-203ENST00000469543 SMIM6P0DI80 62 aa15.62■□□□□ 0.09
VIM-203ENST00000469543 LYPD2Q6UXB3 125 aa15.62■□□□□ 0.09
VIM-203ENST00000469543 OR10W1Q8NGF6 305 aa15.62■□□□□ 0.09
VIM-203ENST00000469543 MIOXQ9UGB7 285 aa15.62■□□□□ 0.09
VIM-203ENST00000469543 CHD8Q9HCK8 2581 aa15.62■□□□□ 0.09
VIM-203ENST00000469543 MKRN2OSH3BPM6 223 aa15.61■□□□□ 0.09
VIM-203ENST00000469543 PRRG2O14669 202 aa15.61■□□□□ 0.09
VIM-203ENST00000469543 RAB7AP51149 207 aa15.61■□□□□ 0.09
VIM-203ENST00000469543 PYY3Q5JQD4 70 aa15.61■□□□□ 0.09
VIM-203ENST00000469543 PCGF1Q9BSM1 259 aa15.61■□□□□ 0.09
VIM-203ENST00000469543 GGACTQ9BVM4 153 aa15.61■□□□□ 0.09
VIM-203ENST00000469543 TMEM250H0YL14 139 aa15.61■□□□□ 0.09
VIM-203ENST00000469543 PFN1P07737 140 aaKnown RBP15.61■□□□□ 0.09
VIM-203ENST00000469543 IRF2P14316 349 aa15.61■□□□□ 0.09
VIM-203ENST00000469543 CDX1P47902 265 aaPredicted RBP15.61■□□□□ 0.09
VIM-203ENST00000469543 TDGF1P3P51864 188 aa15.61■□□□□ 0.09
VIM-203ENST00000469543 FAM3BP58499 235 aaPredicted RBP15.61■□□□□ 0.09
VIM-203ENST00000469543 PMS2P11Q13670 270 aa15.61■□□□□ 0.09
VIM-203ENST00000469543 SLC24A4Q8NFF2 622 aa15.61■□□□□ 0.09
VIM-203ENST00000469543 TMEM14BQ9NUH8 114 aa15.61■□□□□ 0.09
VIM-203ENST00000469543 GAB2Q9UQC2 676 aa15.61■□□□□ 0.09
VIM-203ENST00000469543 A0A1W2PPQ1 181 aa15.61■□□□□ 0.09
VIM-203ENST00000469543 PHOX2AO14813 284 aa15.61■□□□□ 0.09
VIM-203ENST00000469543 ACTL6BO94805 426 aa15.61■□□□□ 0.09
VIM-203ENST00000469543 HSPE1P61604 102 aaKnown RBP15.61■□□□□ 0.09
VIM-203ENST00000469543 OR13D1Q8NGV5 346 aa15.61■□□□□ 0.09
VIM-203ENST00000469543 OR52E5Q8NH55 327 aa15.61■□□□□ 0.09
VIM-203ENST00000469543 OR51B2Q9Y5P1 312 aa15.61■□□□□ 0.09
VIM-203ENST00000469543 E7EUB6 86 aa15.6■□□□□ 0.09
VIM-203ENST00000469543 FABP1P07148 127 aa15.6■□□□□ 0.09
VIM-203ENST00000469543 IGFBP2P18065 325 aa15.6■□□□□ 0.09
VIM-203ENST00000469543 GFRALQ6UXV0 394 aa15.6■□□□□ 0.09
VIM-203ENST00000469543 NEIL1Q96FI4 390 aaPredicted RBP15.6■□□□□ 0.09
VIM-203ENST00000469543 MANBALQ9NQG1 85 aa15.6■□□□□ 0.09
VIM-203ENST00000469543 SLC25A10Q9UBX3 287 aaPredicted RBP15.6■□□□□ 0.09
VIM-203ENST00000469543 COL6A6A6NMZ7 2263 aa15.6■□□□□ 0.09
VIM-203ENST00000469543 TRBV20OR9-2A0A075B6H5 130 aa15.6■□□□□ 0.09
VIM-203ENST00000469543 C17orf100A8MU93 164 aa15.6■□□□□ 0.09
VIM-203ENST00000469543 TNFSF4P23510 183 aa15.6■□□□□ 0.09
VIM-203ENST00000469543 NPY1RP25929 384 aa15.6■□□□□ 0.09
VIM-203ENST00000469543 RPL31P62899 125 aaKnown RBP15.6■□□□□ 0.09
VIM-203ENST00000469543 RPUSD1Q9UJJ7 312 aaKnown RBP15.6■□□□□ 0.09
VIM-203ENST00000469543 J3QR06 171 aa15.59■□□□□ 0.09
VIM-203ENST00000469543 GALR1P47211 349 aa15.59■□□□□ 0.09
VIM-203ENST00000469543 B2MP61769 119 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms