RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 FOXI2Q6ZQN5 318 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 SHISA6Q6ZSJ9 500 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 FAM231DQ6ZW35 169 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 WDR31Q8NA23 367 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 H1FXQ92522 213 aaKnown RBP7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 MBD6Q96DN6 1003 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 GGTLC1Q9BX51 225 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 MAP1LC3CQ9BXW4 147 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 RNASE7Q9H1E1 156 aaKnown RBP7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 GTSF1LQ9H1H1 148 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 IL36RNQ9UBH0 155 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 KIAA1549Q9HCM3 1950 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 TNRC6AQ8NDV7 1962 aaKnown RBP7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 A0A1W2PNR3 127 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 A0A1W2PPM0 123 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 GAGE12HA6NDE8 117 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 SHISA8B8ZZ34 492 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 H0Y8X5 98 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 H3BUT2 72 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 CLDN14O95500 239 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 TCL1AP56279 114 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 TMPRSS3P57727 454 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 CATR1Q13166 79 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 RTL8BQ17RB0 113 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 SPATA46Q5T0L3 261 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 Q6ZSR6 202 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 DOLPP1Q86YN1 238 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 KIR3DL3Q8N743 410 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 C5orf30Q96GV9 206 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 CLCF1Q9UBD9 225 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 TP73-AS1Q9UF72 201 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 SPCS1Q9Y6A9 102 aa7.51□□□□□ -1.21
SMARCE1-207ENST00000469334 RP1P56715 2156 aa7.5□□□□□ -1.21
SMARCE1-207ENST00000469334 TRAV26-1A0A087WT03 109 aa7.5□□□□□ -1.21
SMARCE1-207ENST00000469334 C2orf72A6NCS6 295 aa7.5□□□□□ -1.21
SMARCE1-207ENST00000469334 ANKRD30BLA7E2S9 258 aa7.5□□□□□ -1.21
SMARCE1-207ENST00000469334 SIVA1O15304 175 aa7.5□□□□□ -1.21
SMARCE1-207ENST00000469334 ZNF207O43670 478 aaKnown RBP7.5□□□□□ -1.21
SMARCE1-207ENST00000469334 APOA2P02652 100 aa7.5□□□□□ -1.21
SMARCE1-207ENST00000469334 FABP2P12104 132 aa7.5□□□□□ -1.21
SMARCE1-207ENST00000469334 SLC35B1P78383 322 aa7.5□□□□□ -1.21
SMARCE1-207ENST00000469334 NOGQ13253 232 aa7.5□□□□□ -1.21
SMARCE1-207ENST00000469334 FXYD3Q14802 87 aa7.5□□□□□ -1.21
SMARCE1-207ENST00000469334 ZNF841Q6ZN19 808 aa7.5□□□□□ -1.21
SMARCE1-207ENST00000469334 SYT13Q7L8C5 426 aa7.5□□□□□ -1.21
SMARCE1-207ENST00000469334 DRAM1Q8N682 238 aa7.5□□□□□ -1.21
SMARCE1-207ENST00000469334 STXBP6Q8NFX7 210 aa7.5□□□□□ -1.21
SMARCE1-207ENST00000469334 OR4A5Q8NH83 315 aa7.5□□□□□ -1.21
SMARCE1-207ENST00000469334 CT55Q8WUE5 264 aa7.5□□□□□ -1.21
SMARCE1-207ENST00000469334 TRIB1Q96RU8 372 aa7.5□□□□□ -1.21
SMARCE1-207ENST00000469334 PHF7Q9BWX1 381 aaPredicted RBP7.5□□□□□ -1.21
SMARCE1-207ENST00000469334 WDR54Q9H977 334 aa7.5□□□□□ -1.21
SMARCE1-207ENST00000469334 OBP2AQ9NY56 170 aa7.5□□□□□ -1.21
SMARCE1-207ENST00000469334 OR1A1Q9P1Q5 309 aa7.5□□□□□ -1.21
SMARCE1-207ENST00000469334 HSPB8Q9UJY1 196 aa7.5□□□□□ -1.21
SMARCE1-207ENST00000469334 NCKAP5O14513 1909 aa7.5□□□□□ -1.21
SMARCE1-207ENST00000469334 IGHV1-24A0A0C4DH33 117 aa7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 ZIC3O60481 467 aa7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 CA3P07451 260 aa7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 PPOXP50336 477 aa7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 LINC01545Q5VT33 79 aa7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 TREML4Q6UXN2 200 aa7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 NHLRC2Q8NBF2 726 aa7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 OR9G4Q8NGQ1 327 aa7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 IGF2BP2-AS1Q96M15 143 aa7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 MGST2Q99735 147 aa7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 KLRF1Q9NZS2 232 aa7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 THYN1Q9P016 225 aa7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 ZNF257Q9Y2Q1 563 aa7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 CENPFP49454 3210 aa7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 A0A0C4DFX4 3053 aa7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 TEX48A0A1B0GUV7 120 aa7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 NPIPA3F8WFD2 350 aa7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 RPL8P62917 257 aaKnown RBP7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 KIR3DS1Q14943 382 aa7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 RSPO4Q2I0M5 234 aaPredicted RBP7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 C20orf204Q6ZNR8 217 aa7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 TPRX1Q8N7U7 411 aa7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 MRPL43Q8N983 215 aaKnown RBP7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 OR4X2Q8NGF9 303 aa7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 OR4A16Q8NH70 328 aa7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 ZDHHC16Q969W1 377 aa7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 URB1-AS1Q96HZ7 61 aa7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 TAAR6Q96RI8 345 aa7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 PRDM6Q9NQX0 595 aa7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 SERTAD4Q9NUC0 356 aa7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 SOX21Q9Y651 276 aaPredicted RBP7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 PTPRSQ13332 1948 aa7.49□□□□□ -1.21
SMARCE1-207ENST00000469334 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.48□□□□□ -1.21
SMARCE1-207ENST00000469334 FAM90A9PA6NNJ1 464 aa7.48□□□□□ -1.21
SMARCE1-207ENST00000469334 HSPB6O14558 160 aa7.48□□□□□ -1.21
SMARCE1-207ENST00000469334 IGLV2-8P01709 118 aa7.48□□□□□ -1.21
SMARCE1-207ENST00000469334 FBLP22087 321 aaKnown RBP7.48□□□□□ -1.21
SMARCE1-207ENST00000469334 G6PCP35575 357 aa7.48□□□□□ -1.21
SMARCE1-207ENST00000469334 MFAP2P55001 183 aa7.48□□□□□ -1.21
SMARCE1-207ENST00000469334 RPL24P83731 157 aaKnown RBP7.48□□□□□ -1.21
SMARCE1-207ENST00000469334 EFNB3Q15768 340 aa7.48□□□□□ -1.21
SMARCE1-207ENST00000469334 MIC13Q5XKP0 118 aa7.48□□□□□ -1.21
SMARCE1-207ENST00000469334 H2BFWTQ7Z2G1 175 aa7.48□□□□□ -1.21
SMARCE1-207ENST00000469334 IL1F10Q8WWZ1 152 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms