RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 C2orf70A6NJV1 201 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 SYS1-DBNDD2H3BUS1 97 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 RER1O15258 196 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 SYNGR1O43759 233 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 DUSP11O75319 330 aaKnown RBP4.06□□□□□ -1.76
SF3B1-207ENST00000468925 CLDN1O95832 211 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 APOA2P02652 100 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 CFIP05156 583 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 SMIM13P0DJ93 91 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 GP1BBP13224 206 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 OR3A4PP47883 348 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 OR1D4P47884 311 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 FUT6P51993 359 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 CLDN2P57739 230 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 SRSF1Q07955 248 aaKnown RBP eCLIP4.06□□□□□ -1.76
SF3B1-207ENST00000468925 FUT7Q11130 342 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 MYBPHQ13203 477 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 KIR2DS3Q14952 304 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 SP6Q3SY56 376 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 TIGITQ495A1 244 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 TMEM52BQ4KMG9 183 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 CXorf66Q5JRM2 361 aaPredicted RBP4.06□□□□□ -1.76
SF3B1-207ENST00000468925 LYRM7Q5U5X0 104 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 FAM69BQ5VUD6 431 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 CARD17Q5XLA6 110 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 TMEM14EPQ6UXP3 125 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 LINC00596Q86U02 117 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 TBC1D26Q86UD7 250 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 ODF3L1Q8IXM7 274 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 Q8N1X5 172 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 LILRA3Q8N6C8 439 aaPredicted RBP4.06□□□□□ -1.76
SF3B1-207ENST00000468925 WDR31Q8NA23 367 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 OR1L1Q8NH94 360 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 PIFOQ8TCI5 191 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 TMEM45BQ96B21 275 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 COX14Q96I36 57 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 ADTRPQ96IZ2 230 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 TRIB1Q96RU8 372 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 AMELYQ99218 206 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 VGLL1Q99990 258 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 SRSF8Q9BRL6 282 aaKnown RBP4.06□□□□□ -1.76
SF3B1-207ENST00000468925 C19orf24Q9BVV8 132 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 AICDAQ9GZX7 198 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 RAB1BQ9H0U4 201 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 THAP10Q9P2Z0 257 aaPredicted RBP4.06□□□□□ -1.76
SF3B1-207ENST00000468925 NXT1Q9UKK6 140 aaKnown RBP4.06□□□□□ -1.76
SF3B1-207ENST00000468925 RALYQ9UKM9 306 aaKnown RBP4.06□□□□□ -1.76
SF3B1-207ENST00000468925 SLC17A4Q9Y2C5 497 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 BRCA2P51587 3418 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 DOCK9Q9BZ29 2069 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 CEP290O15078 2479 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 SPTBN5Q9NRC6 3674 aaKnown RBP4.05□□□□□ -1.76
SF3B1-207ENST00000468925 IGKV1-8A0A0C4DH67 115 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 SMIM27A0A1W2PRY6 76 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 TMEM8BA6NDV4 472 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 ZNF785A8K8V0 405 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 SHISA9B4DS77 424 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 TEX22C9J3V5 150 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 BMPR1BO00238 502 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 RAB29O14966 203 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 PDCD6O75340 191 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 DHRS3O75911 302 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 OR7C1O76099 320 aaPredicted RBP4.05□□□□□ -1.76
SF3B1-207ENST00000468925 NDUFB4O95168 129 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 LEPROTL1O95214 131 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 IGLV3-1P01715 115 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 CTLA4P16410 223 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 NTF3P20783 257 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 SRIP30626 198 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 OPRK1P41145 380 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 FXYD4P59646 89 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 GNB1P62873 340 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 POU3F1Q03052 451 aaPredicted RBP4.05□□□□□ -1.76
SF3B1-207ENST00000468925 CXCL9Q07325 125 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 TAL2Q16559 108 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 PHLDA2Q53GA4 152 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 C5orf47Q569G3 176 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 Q56UQ5 140 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 FNDC7Q5VTL7 733 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 FIGLAQ6QHK4 219 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 DHRS13Q6UX07 377 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 ZNF788Q6ZQV5 615 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 SEM1Q6ZVN7 128 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 FAM231DQ6ZW35 169 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 CPEB2Q7Z5Q1 589 aaKnown RBP4.05□□□□□ -1.76
SF3B1-207ENST00000468925 MARCH3Q86UD3 253 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 ZNF547Q8IVP9 402 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 GCSAMQ8N6F7 178 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 GATSQ8NAP1 163 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 NHLRC2Q8NBF2 726 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 OR8B12Q8NGG6 310 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 OR10X1Q8NGY0 326 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 OR10D3Q8NH80 312 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 H1FXQ92522 213 aaKnown RBP4.05□□□□□ -1.76
SF3B1-207ENST00000468925 RERGQ96A58 199 aaPredicted RBP4.05□□□□□ -1.76
SF3B1-207ENST00000468925 VSTM2LQ96N03 204 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 OR4C12Q96R67 309 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 TMEM167BQ9NRX6 74 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 HIGD1BQ9P298 99 aa4.05□□□□□ -1.76
SF3B1-207ENST00000468925 TSSC4Q9Y5U2 329 aaPredicted RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms