RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 FLYWCH2Q96CP2 140 aaKnown RBP6.2□□□□□ -1.42
COL6A3-208ENST00000468792 TIMD4Q96H15 378 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 RCC1LQ96I51 464 aaKnown RBP6.2□□□□□ -1.42
COL6A3-208ENST00000468792 TMEM231Q9H6L2 316 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 NPVFQ9HCQ7 196 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 ENY2Q9NPA8 101 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 WASHC3Q9Y3C0 194 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 LSM4Q9Y4Z0 139 aaKnown RBP6.2□□□□□ -1.42
COL6A3-208ENST00000468792 OR51B2Q9Y5P1 312 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 DIDO1Q9BTC0 2240 aaKnown RBP6.19□□□□□ -1.42
COL6A3-208ENST00000468792 TRAV3A0A0B4J244 114 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 LOC102723971A0A1B0GUV8 181 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 A0A1W2PN81 502 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 A0A1W2PPE3 182 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 SRRM4A7MD48 611 aaKnown RBP6.19□□□□□ -1.42
COL6A3-208ENST00000468792 CYB5BO43169 146 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 TSPAN9O75954 239 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 IFNA10P01566 189 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 IGHV3-7P01780 117 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 IGKV1-16P04430 117 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 SRP19P09132 144 aaKnown RBP6.19□□□□□ -1.42
COL6A3-208ENST00000468792 BCL2P10415 239 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 IGFBP2P18065 325 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 FGF7P21781 194 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 NPY1RP25929 384 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 CHRNA7P36544 502 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 GPX4P36969 197 aaPredicted RBP6.19□□□□□ -1.42
COL6A3-208ENST00000468792 ICAM4Q14773 271 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 ZNF726P1Q15940 193 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 ACOT6Q3I5F7 207 aaPredicted RBP6.19□□□□□ -1.42
COL6A3-208ENST00000468792 WDR25Q64LD2 544 aaPredicted RBP6.19□□□□□ -1.42
COL6A3-208ENST00000468792 SSX9Q7RTT3 188 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 TGIF2LXQ8IUE1 241 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 VKORC1L1Q8N0U8 176 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 TEX45Q8NA69 505 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 SLC24A4Q8NFF2 622 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 OR8B3Q8NGG8 313 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 TMEM170AQ8WVE7 144 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 C17orf50Q8WW18 174 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 CACNG8Q8WXS5 425 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 H1FXQ92522 213 aaKnown RBP6.19□□□□□ -1.42
COL6A3-208ENST00000468792 OR8B2Q96RD0 313 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 TXNDC17Q9BRA2 123 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 MRPL20Q9BYC9 149 aaKnown RBP6.19□□□□□ -1.42
COL6A3-208ENST00000468792 ACTR3CQ9C0K3 210 aaPredicted RBP6.19□□□□□ -1.42
COL6A3-208ENST00000468792 CHODLQ9H9P2 273 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 PLEKHA3Q9HB20 300 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 SMCO4Q9NRQ5 59 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 NDUFA4L2Q9NRX3 87 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 SLC39A9Q9NUM3 307 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 AMMECR1Q9Y4X0 333 aaPredicted RBP6.19□□□□□ -1.42
COL6A3-208ENST00000468792 RFNGQ9Y644 331 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 ABCA4P78363 2273 aa6.19□□□□□ -1.42
COL6A3-208ENST00000468792 DOCK11Q5JSL3 2073 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 A0A087WWC5 75 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 TEX50A0A1B0GTY4 177 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 MAP1LC3B2A6NCE7 125 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 FAM74A7A6NL05 159 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 B4DEV8 164 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 TMEM250H0YL14 139 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 M0R1W7 72 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 RRHO14718 337 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 LIPFP07098 398 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 SAA1P0DJI8 122 aaPredicted RBP6.18□□□□□ -1.42
COL6A3-208ENST00000468792 MAS1LP35410 378 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 RPL29P47914 159 aaKnown RBP6.18□□□□□ -1.42
COL6A3-208ENST00000468792 NPBWR1P48145 328 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 HOXA1P49639 335 aaPredicted RBP6.18□□□□□ -1.42
COL6A3-208ENST00000468792 PSMB3P49720 205 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 ERVFRD-1P60508 538 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 RPL8P62917 257 aaKnown RBP6.18□□□□□ -1.42
COL6A3-208ENST00000468792 PAX2Q02962 417 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 PNRC1Q12796 327 aaPredicted RBP6.18□□□□□ -1.42
COL6A3-208ENST00000468792 RAB31Q13636 194 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 LY6DQ14210 128 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 HLA-DRB5Q30154 266 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 FAM74A3Q4VXF1 159 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 ZNF787Q6DD87 383 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 PVRIGQ6DKI7 326 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 ACSM6Q6P461 480 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 TREML4Q6UXN2 200 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 SLC35E3Q7Z769 313 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 MRPL41Q8IXM3 137 aaKnown RBP6.18□□□□□ -1.42
COL6A3-208ENST00000468792 PNKDQ8N490 385 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 OR10G9Q8NGN4 311 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 OR10G7Q8NGN6 311 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 ITLN2Q8WWU7 325 aaPredicted RBP6.18□□□□□ -1.42
COL6A3-208ENST00000468792 HARBI1Q96MB7 349 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 RARRES2Q99969 163 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 C19orf24Q9BVV8 132 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 CLEC7AQ9BXN2 247 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 MAP1LC3BQ9GZQ8 125 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 PATZ1Q9HBE1 687 aaKnown RBP6.18□□□□□ -1.42
COL6A3-208ENST00000468792 MANBALQ9NQG1 85 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 VAX2Q9UIW0 290 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 NBASA2RRP1 2371 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 HIVEP3Q5T1R4 2406 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 PKD1L2Q7Z442 2459 aa6.18□□□□□ -1.42
COL6A3-208ENST00000468792 MALRD1Q5VYJ5 2156 aa6.17□□□□□ -1.42
COL6A3-208ENST00000468792 IGHV2-26A0A0B4J1V2 119 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms