RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 KLK11Q9UBX7 282 aa14.61□□□□□ -0.07
COL7A1-207ENST00000467985 MTFP1Q9UDX5 166 aa14.61□□□□□ -0.07
COL7A1-207ENST00000467985 ZNF257Q9Y2Q1 563 aa14.61□□□□□ -0.07
COL7A1-207ENST00000467985 RBFOX2O43251 390 aaKnown RBP eCLIP14.6□□□□□ -0.07
COL7A1-207ENST00000467985 GSTZ1O43708 216 aaPredicted RBP14.6□□□□□ -0.07
COL7A1-207ENST00000467985 HLA-DMAP28067 261 aa14.6□□□□□ -0.07
COL7A1-207ENST00000467985 SYNJ2BPP57105 145 aa14.6□□□□□ -0.07
COL7A1-207ENST00000467985 BRWD1-AS2P59051 145 aa14.6□□□□□ -0.07
COL7A1-207ENST00000467985 DEFA5Q01523 94 aa14.6□□□□□ -0.07
COL7A1-207ENST00000467985 CATR1Q13166 79 aa14.6□□□□□ -0.07
COL7A1-207ENST00000467985 RPEL1Q2QD12 228 aa14.6□□□□□ -0.07
COL7A1-207ENST00000467985 OR4A5Q8NH83 315 aa14.6□□□□□ -0.07
COL7A1-207ENST00000467985 THAP7Q9BT49 309 aaPredicted RBP14.6□□□□□ -0.07
COL7A1-207ENST00000467985 SRRQ9GZT4 340 aa14.6□□□□□ -0.07
COL7A1-207ENST00000467985 KMT2CQ8NEZ4 4911 aaKnown RBP14.59□□□□□ -0.07
COL7A1-207ENST00000467985 TNFSF12O43508 249 aa14.59□□□□□ -0.07
COL7A1-207ENST00000467985 RPL27AP46776 148 aaKnown RBP14.59□□□□□ -0.07
COL7A1-207ENST00000467985 HERV-K104P61576 105 aa14.59□□□□□ -0.07
COL7A1-207ENST00000467985 EXOSC2Q13868 293 aaKnown RBP14.59□□□□□ -0.07
COL7A1-207ENST00000467985 C10orf55Q5SWW7 151 aa14.59□□□□□ -0.07
COL7A1-207ENST00000467985 SPAG16Q8N0X2 631 aa14.59□□□□□ -0.07
COL7A1-207ENST00000467985 CD300LFQ8TDQ1 290 aa14.59□□□□□ -0.07
COL7A1-207ENST00000467985 TSC22D3Q99576 134 aa14.59□□□□□ -0.07
COL7A1-207ENST00000467985 ASCL2Q99929 193 aa14.59□□□□□ -0.07
COL7A1-207ENST00000467985 SIGLEC8Q9NYZ4 499 aa14.59□□□□□ -0.07
COL7A1-207ENST00000467985 NPIPB5A8MRT5 1133 aa14.58□□□□□ -0.08
COL7A1-207ENST00000467985 TEX22C9J3V5 150 aa14.58□□□□□ -0.08
COL7A1-207ENST00000467985 H0Y980 276 aa14.58□□□□□ -0.08
COL7A1-207ENST00000467985 RBMXL2O75526 392 aaKnown RBP14.58□□□□□ -0.08
COL7A1-207ENST00000467985 DHFRP00374 187 aa14.58□□□□□ -0.08
COL7A1-207ENST00000467985 PMP2P02689 132 aa14.58□□□□□ -0.08
COL7A1-207ENST00000467985 PRH1P02810 166 aa14.58□□□□□ -0.08
COL7A1-207ENST00000467985 TAS2R31P59538 309 aa14.58□□□□□ -0.08
COL7A1-207ENST00000467985 TAS2R19P59542 299 aa14.58□□□□□ -0.08
COL7A1-207ENST00000467985 FXYD4P59646 89 aa14.58□□□□□ -0.08
COL7A1-207ENST00000467985 AP3S2P59780 193 aa14.58□□□□□ -0.08
COL7A1-207ENST00000467985 RPL8P62917 257 aaKnown RBP14.58□□□□□ -0.08
COL7A1-207ENST00000467985 GPHA2Q96T91 129 aa14.58□□□□□ -0.08
COL7A1-207ENST00000467985 SLC2A9Q9NRM0 540 aa14.58□□□□□ -0.08
COL7A1-207ENST00000467985 BET1LQ9NYM9 111 aa14.58□□□□□ -0.08
COL7A1-207ENST00000467985 EHFQ9NZC4 300 aa14.58□□□□□ -0.08
COL7A1-207ENST00000467985 ANAPC10Q9UM13 185 aa14.58□□□□□ -0.08
COL7A1-207ENST00000467985 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.57□□□□□ -0.08
COL7A1-207ENST00000467985 HPRT1P00492 218 aa14.57□□□□□ -0.08
COL7A1-207ENST00000467985 TRBV12-3P01733 135 aa14.57□□□□□ -0.08
COL7A1-207ENST00000467985 IFNA6P05013 189 aa14.57□□□□□ -0.08
COL7A1-207ENST00000467985 IL6RP08887 468 aaPredicted RBP14.57□□□□□ -0.08
COL7A1-207ENST00000467985 ZNF735P0CB33 412 aa14.57□□□□□ -0.08
COL7A1-207ENST00000467985 NAT1P18440 290 aa14.57□□□□□ -0.08
COL7A1-207ENST00000467985 HRH1P35367 487 aa14.57□□□□□ -0.08
COL7A1-207ENST00000467985 C15orf32Q32M92 178 aa14.57□□□□□ -0.08
COL7A1-207ENST00000467985 RNASE10Q5GAN6 216 aaKnown RBP14.57□□□□□ -0.08
COL7A1-207ENST00000467985 ZNF57Q68EA5 555 aaPredicted RBP14.57□□□□□ -0.08
COL7A1-207ENST00000467985 DHRS11Q6UWP2 260 aa14.57□□□□□ -0.08
COL7A1-207ENST00000467985 IL34Q6ZMJ4 242 aa14.57□□□□□ -0.08
COL7A1-207ENST00000467985 TOMM5Q8N4H5 51 aa14.57□□□□□ -0.08
COL7A1-207ENST00000467985 FYTTD1Q96QD9 318 aaKnown RBP14.57□□□□□ -0.08
COL7A1-207ENST00000467985 PEMTQ9UBM1 199 aa14.57□□□□□ -0.08
COL7A1-207ENST00000467985 HMX3A6NHT5 357 aa14.56□□□□□ -0.08
COL7A1-207ENST00000467985 FRMD6-AS1P0C7T7 363 aa14.56□□□□□ -0.08
COL7A1-207ENST00000467985 NQO2P16083 231 aa14.56□□□□□ -0.08
COL7A1-207ENST00000467985 HLA-GP17693 338 aa14.56□□□□□ -0.08
COL7A1-207ENST00000467985 TBPP20226 339 aa14.56□□□□□ -0.08
COL7A1-207ENST00000467985 TSPAN5P62079 268 aa14.56□□□□□ -0.08
COL7A1-207ENST00000467985 OR4A47Q6IF82 309 aa14.56□□□□□ -0.08
COL7A1-207ENST00000467985 ZNF818PQ6ZRF7 136 aa14.56□□□□□ -0.08
COL7A1-207ENST00000467985 SSX9Q7RTT3 188 aa14.56□□□□□ -0.08
COL7A1-207ENST00000467985 TMEM17Q86X19 198 aa14.56□□□□□ -0.08
COL7A1-207ENST00000467985 TMEM229BQ8NBD8 167 aa14.56□□□□□ -0.08
COL7A1-207ENST00000467985 HRASLSQ9HDD0 168 aa14.56□□□□□ -0.08
COL7A1-207ENST00000467985 M0QYG6 137 aa14.55□□□□□ -0.08
COL7A1-207ENST00000467985 BMPR1BO00238 502 aa14.55□□□□□ -0.08
COL7A1-207ENST00000467985 OR2J3O76001 311 aa14.55□□□□□ -0.08
COL7A1-207ENST00000467985 RAB3DO95716 219 aa14.55□□□□□ -0.08
COL7A1-207ENST00000467985 CD3DP04234 171 aa14.55□□□□□ -0.08
COL7A1-207ENST00000467985 CRYGCP07315 174 aa14.55□□□□□ -0.08
COL7A1-207ENST00000467985 FGF2P09038 288 aa14.55□□□□□ -0.08
COL7A1-207ENST00000467985 AKAIN1P0CW23 69 aa14.55□□□□□ -0.08
COL7A1-207ENST00000467985 HIST1H1BP16401 226 aaKnown RBP14.55□□□□□ -0.08
COL7A1-207ENST00000467985 FAUP35544 74 aaKnown RBP14.55□□□□□ -0.08
COL7A1-207ENST00000467985 RFX2P48378 723 aa14.55□□□□□ -0.08
COL7A1-207ENST00000467985 PPP5CP53041 499 aa14.55□□□□□ -0.08
COL7A1-207ENST00000467985 POU2AF1Q16633 256 aa14.55□□□□□ -0.08
COL7A1-207ENST00000467985 AADACL3Q5VUY0 350 aa14.55□□□□□ -0.08
COL7A1-207ENST00000467985 LCN12Q6JVE5 192 aa14.55□□□□□ -0.08
COL7A1-207ENST00000467985 STEAP1BQ6NZ63 245 aa14.55□□□□□ -0.08
COL7A1-207ENST00000467985 HAPLN4Q86UW8 402 aa14.55□□□□□ -0.08
COL7A1-207ENST00000467985 CCDC32Q9BV29 185 aa14.55□□□□□ -0.08
COL7A1-207ENST00000467985 PLEKHA2Q9HB19 425 aa14.55□□□□□ -0.08
COL7A1-207ENST00000467985 CSN3P07498 182 aa14.54□□□□□ -0.08
COL7A1-207ENST00000467985 PSMB6P28072 239 aa14.54□□□□□ -0.08
COL7A1-207ENST00000467985 GNRHRP30968 328 aa14.54□□□□□ -0.08
COL7A1-207ENST00000467985 MEF2DQ14814 521 aa14.54□□□□□ -0.08
COL7A1-207ENST00000467985 KLK9Q2XQG4 91 aa14.54□□□□□ -0.08
COL7A1-207ENST00000467985 LYSMD2Q8IV50 215 aa14.54□□□□□ -0.08
COL7A1-207ENST00000467985 SBSPONQ8IVN8 264 aa14.54□□□□□ -0.08
COL7A1-207ENST00000467985 SGPP2Q8IWX5 399 aa14.54□□□□□ -0.08
COL7A1-207ENST00000467985 OR51H1Q8NH63 302 aa14.54□□□□□ -0.08
COL7A1-207ENST00000467985 TRIM63Q969Q1 353 aa14.54□□□□□ -0.08
COL7A1-207ENST00000467985 MOB3AQ96BX8 217 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms