RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 TIMM50Q3ZCQ8 353 aa12.92□□□□□ -0.34
TRIM56-203ENST00000467847 TM4SF20Q53R12 229 aa12.92□□□□□ -0.34
TRIM56-203ENST00000467847 OR4A5Q8NH83 315 aa12.92□□□□□ -0.34
TRIM56-203ENST00000467847 LGALS14Q8TCE9 139 aa12.92□□□□□ -0.34
TRIM56-203ENST00000467847 SECTM1Q8WVN6 248 aa12.92□□□□□ -0.34
TRIM56-203ENST00000467847 CXorf58Q96LI9 332 aa12.92□□□□□ -0.34
TRIM56-203ENST00000467847 AIFM2Q9BRQ8 373 aa12.92□□□□□ -0.34
TRIM56-203ENST00000467847 CCL28Q9NRJ3 127 aa12.92□□□□□ -0.34
TRIM56-203ENST00000467847 BET1LQ9NYM9 111 aa12.92□□□□□ -0.34
TRIM56-203ENST00000467847 KLK9Q9UKQ9 250 aa12.92□□□□□ -0.34
TRIM56-203ENST00000467847 RRP15Q9Y3B9 282 aaKnown RBP12.92□□□□□ -0.34
TRIM56-203ENST00000467847 LOC102724200A0A096LPH7 203 aaPredicted RBP12.91□□□□□ -0.34
TRIM56-203ENST00000467847 CGB1A6NKQ9 187 aa12.91□□□□□ -0.34
TRIM56-203ENST00000467847 FCGR2CP31995 323 aa12.91□□□□□ -0.34
TRIM56-203ENST00000467847 OR2B8PP59922 312 aa12.91□□□□□ -0.34
TRIM56-203ENST00000467847 SFXN4Q6P4A7 337 aa12.91□□□□□ -0.34
TRIM56-203ENST00000467847 UNQ9165/PRO28630Q6UXU0 137 aa12.91□□□□□ -0.34
TRIM56-203ENST00000467847 TPRA1Q86W33 373 aa12.91□□□□□ -0.34
TRIM56-203ENST00000467847 SPAG16Q8N0X2 631 aa12.91□□□□□ -0.34
TRIM56-203ENST00000467847 BEST4Q8NFU0 473 aa12.91□□□□□ -0.34
TRIM56-203ENST00000467847 OR13F1Q8NGS4 319 aa12.91□□□□□ -0.34
TRIM56-203ENST00000467847 OVOL2Q9BRP0 275 aa12.91□□□□□ -0.34
TRIM56-203ENST00000467847 RHBDL2Q9NX52 303 aa12.91□□□□□ -0.34
TRIM56-203ENST00000467847 PTHLHP12272 177 aa12.9□□□□□ -0.34
TRIM56-203ENST00000467847 PSMB9P28065 219 aa12.9□□□□□ -0.34
TRIM56-203ENST00000467847 GPR183P32249 361 aa12.9□□□□□ -0.34
TRIM56-203ENST00000467847 GABARAPL2P60520 117 aa12.9□□□□□ -0.34
TRIM56-203ENST00000467847 MSMO1Q15800 293 aa12.9□□□□□ -0.34
TRIM56-203ENST00000467847 ZNF585BQ52M93 769 aa12.9□□□□□ -0.34
TRIM56-203ENST00000467847 UBE2UQ5VVX9 321 aa12.9□□□□□ -0.34
TRIM56-203ENST00000467847 RBPMS2Q6ZRY4 209 aaKnown RBP12.9□□□□□ -0.34
TRIM56-203ENST00000467847 MARC2Q969Z3 335 aa12.9□□□□□ -0.34
TRIM56-203ENST00000467847 TRAV25A0A0B4J276 109 aa12.89□□□□□ -0.35
TRIM56-203ENST00000467847 SULT1C2O00338 296 aa12.89□□□□□ -0.35
TRIM56-203ENST00000467847 RBFOX2O43251 390 aaKnown RBP eCLIP12.89□□□□□ -0.35
TRIM56-203ENST00000467847 MRPS14O60783 128 aaKnown RBP12.89□□□□□ -0.35
TRIM56-203ENST00000467847 PPYP01298 95 aa12.89□□□□□ -0.35
TRIM56-203ENST00000467847 GVQW1Q8N7I0 195 aa12.89□□□□□ -0.35
TRIM56-203ENST00000467847 ZBTB34Q8NCN2 500 aa12.89□□□□□ -0.35
TRIM56-203ENST00000467847 OR1L6Q8NGR2 347 aa12.89□□□□□ -0.35
TRIM56-203ENST00000467847 ZNF502Q8TBZ5 544 aa12.89□□□□□ -0.35
TRIM56-203ENST00000467847 SSR3Q9UNL2 185 aa12.89□□□□□ -0.35
TRIM56-203ENST00000467847 UFC1Q9Y3C8 167 aa12.89□□□□□ -0.35
TRIM56-203ENST00000467847 TRAV18A0A075B6X5 111 aa12.88□□□□□ -0.35
TRIM56-203ENST00000467847 TRAV3A0A0B4J244 114 aa12.88□□□□□ -0.35
TRIM56-203ENST00000467847 IGHV3-35A0A0C4DH35 117 aa12.88□□□□□ -0.35
TRIM56-203ENST00000467847 IGLC7A0M8Q6 106 aa12.88□□□□□ -0.35
TRIM56-203ENST00000467847 C8orf88P0DMB2 117 aa12.88□□□□□ -0.35
TRIM56-203ENST00000467847 TAS2R31P59538 309 aa12.88□□□□□ -0.35
TRIM56-203ENST00000467847 CATR1Q13166 79 aa12.88□□□□□ -0.35
TRIM56-203ENST00000467847 PLET1Q6UQ28 207 aa12.88□□□□□ -0.35
TRIM56-203ENST00000467847 HOGA1Q86XE5 327 aa12.88□□□□□ -0.35
TRIM56-203ENST00000467847 COMMD5Q9GZQ3 224 aa12.88□□□□□ -0.35
TRIM56-203ENST00000467847 SLC5A7Q9GZV3 580 aa12.88□□□□□ -0.35
TRIM56-203ENST00000467847 THYN1Q9P016 225 aa12.88□□□□□ -0.35
TRIM56-203ENST00000467847 MRPL27Q9P0M9 148 aaKnown RBP12.88□□□□□ -0.35
TRIM56-203ENST00000467847 RAB26Q9ULW5 256 aa12.88□□□□□ -0.35
TRIM56-203ENST00000467847 CXorf65A6NEN9 183 aa12.87□□□□□ -0.35
TRIM56-203ENST00000467847 UPK2O00526 184 aa12.87□□□□□ -0.35
TRIM56-203ENST00000467847 HPRT1P00492 218 aa12.87□□□□□ -0.35
TRIM56-203ENST00000467847 NQO2P16083 231 aa12.87□□□□□ -0.35
TRIM56-203ENST00000467847 PTBP1P26599 531 aaKnown RBP eCLIP12.87□□□□□ -0.35
TRIM56-203ENST00000467847 SDC2P34741 201 aa12.87□□□□□ -0.35
TRIM56-203ENST00000467847 FXYD4P59646 89 aa12.87□□□□□ -0.35
TRIM56-203ENST00000467847 PMS2P11Q13670 270 aa12.87□□□□□ -0.35
TRIM56-203ENST00000467847 SLC38A6Q8IZM9 456 aa12.87□□□□□ -0.35
TRIM56-203ENST00000467847 SPARTQ8N0X7 666 aa12.87□□□□□ -0.35
TRIM56-203ENST00000467847 OR2C3Q8N628 320 aa12.87□□□□□ -0.35
TRIM56-203ENST00000467847 LINC00476Q8WZB0 136 aa12.87□□□□□ -0.35
TRIM56-203ENST00000467847 FCGR1BQ92637 280 aa12.87□□□□□ -0.35
TRIM56-203ENST00000467847 SRSF8Q9BRL6 282 aaKnown RBP12.87□□□□□ -0.35
TRIM56-203ENST00000467847 FCER2P06734 321 aa12.86□□□□□ -0.35
TRIM56-203ENST00000467847 ELLP55199 621 aaPredicted RBP12.86□□□□□ -0.35
TRIM56-203ENST00000467847 MXD1Q05195 221 aa12.86□□□□□ -0.35
TRIM56-203ENST00000467847 POU2AF1Q16633 256 aa12.86□□□□□ -0.35
TRIM56-203ENST00000467847 ZNF773Q6PK81 442 aa12.86□□□□□ -0.35
TRIM56-203ENST00000467847 DMBX1Q8NFW5 382 aa12.86□□□□□ -0.35
TRIM56-203ENST00000467847 OR5H6Q8NGV6 325 aa12.86□□□□□ -0.35
TRIM56-203ENST00000467847 OR51H1Q8NH63 302 aa12.86□□□□□ -0.35
TRIM56-203ENST00000467847 SLC25A38Q96DW6 304 aa12.86□□□□□ -0.35
TRIM56-203ENST00000467847 QTRT1Q9BXR0 403 aaKnown RBP12.86□□□□□ -0.35
TRIM56-203ENST00000467847 ZNF436Q9C0F3 470 aaPredicted RBP12.86□□□□□ -0.35
TRIM56-203ENST00000467847 C5orf66Q9H5L9 145 aa12.86□□□□□ -0.35
TRIM56-203ENST00000467847 TMEM140Q9NV12 185 aa12.86□□□□□ -0.35
TRIM56-203ENST00000467847 ETV7Q9Y603 341 aa12.86□□□□□ -0.35
TRIM56-203ENST00000467847 A0A0J9YWU9 116 aa12.85□□□□□ -0.35
TRIM56-203ENST00000467847 CYB5BO43169 146 aa12.85□□□□□ -0.35
TRIM56-203ENST00000467847 TGOLN2O43493 480 aa12.85□□□□□ -0.35
TRIM56-203ENST00000467847 CLEC2LP0C7M8 214 aa12.85□□□□□ -0.35
TRIM56-203ENST00000467847 APOC4P55056 127 aa12.85□□□□□ -0.35
TRIM56-203ENST00000467847 SCAND1P57086 179 aa12.85□□□□□ -0.35
TRIM56-203ENST00000467847 IDNKQ5T6J7 187 aa12.85□□□□□ -0.35
TRIM56-203ENST00000467847 AADACL3Q5VUY0 350 aa12.85□□□□□ -0.35
TRIM56-203ENST00000467847 ZNF818PQ6ZRF7 136 aa12.85□□□□□ -0.35
TRIM56-203ENST00000467847 TMEM17Q86X19 198 aa12.85□□□□□ -0.35
TRIM56-203ENST00000467847 OR10W1Q8NGF6 305 aa12.85□□□□□ -0.35
TRIM56-203ENST00000467847 CD300LFQ8TDQ1 290 aa12.85□□□□□ -0.35
TRIM56-203ENST00000467847 VN1R17PQ8TDU5 208 aa12.85□□□□□ -0.35
TRIM56-203ENST00000467847 SPAG8Q99932 426 aaPredicted RBP12.85□□□□□ -0.35
TRIM56-203ENST00000467847 PLEKHA2Q9HB19 425 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms