RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 CACYBPQ9HB71 228 aaKnown RBP2.51□□□□□ -2.01
VPS50-209ENST00000467326 TMEM38BQ9NVV0 291 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 TBX21Q9UL17 535 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 COQ4Q9Y3A0 265 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 RB1CC1Q8TDY2 1594 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 BICRAQ9NZM4 1560 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 ERICH3Q5RHP9 1530 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 TAF1LQ8IZX4 1826 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 DENND4BO75064 1496 aaPredicted RBP2.51□□□□□ -2.01
VPS50-209ENST00000467326 SIGLEC1Q9BZZ2 1709 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 CEP162Q5TB80 1403 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 VPS8Q8N3P4 1428 aa2.51□□□□□ -2.01
VPS50-209ENST00000467326 TRAV5A0A0B4J249 113 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 IGKV6-21A0A0C4DH24 114 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 A0A0J9YY10 115 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 A0A1B0GW54 56 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 A0A1B0GX78 115 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 C20orf202A1L168 122 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 NKX2-6A6NCS4 301 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 CLDN25C9JDP6 229 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 J3QR89 54 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 LST1O00453 97 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 UBE2L6O14933 153 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 CD7P09564 240 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 SCTP09683 121 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 ZNF705DP0CH99 300 aaPredicted RBP2.5□□□□□ -2.01
VPS50-209ENST00000467326 BCL2P10415 239 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 ZNF25P17030 456 aaPredicted RBP2.5□□□□□ -2.01
VPS50-209ENST00000467326 RPL7P18124 248 aaKnown RBP2.5□□□□□ -2.01
VPS50-209ENST00000467326 OPRM1P35372 400 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 LPAR6P43657 344 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 DEFA3P59666 94 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 HBA1P69905 142 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 FAM78AQ5JUQ0 283 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 PRSS54Q6PEW0 395 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 MORN3Q6PF18 240 aaPredicted RBP2.5□□□□□ -2.01
VPS50-209ENST00000467326 SCXQ7RTU7 201 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 MARCH3Q86UD3 253 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 MKXQ8IYA7 352 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 C1orf174Q8IYL3 243 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 TMEM256Q8N2U0 113 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 C12orf45Q8N5I9 185 aaPredicted RBP2.5□□□□□ -2.01
VPS50-209ENST00000467326 C20orf203Q8NBC4 194 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 SLC30A7Q8NEW0 376 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 RAB2BQ8WUD1 216 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 ARL11Q969Q4 196 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 TOMM6Q96B49 74 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 LXNQ9BS40 222 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 CHAC1Q9BUX1 264 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 RTL8AQ9BWD3 113 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 OR2H1Q9GZK4 316 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 IFI27L2Q9H2X8 130 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 EFCAB1Q9HAE3 211 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 POPDC3Q9HBV1 291 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 NIT2Q9NQR4 276 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 CA10Q9NS85 328 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 ZNF492Q9P255 531 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 RPUSD1Q9UJJ7 312 aaKnown RBP2.5□□□□□ -2.01
VPS50-209ENST00000467326 MED31Q9Y3C7 131 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 A2MP01023 1474 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 OVOS2A0A0J9YW53 1432 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 BCL9O00512 1426 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 OVOS2Q6IE36 1432 aa2.5□□□□□ -2.01
VPS50-209ENST00000467326 EIF4G3O43432 1585 aaKnown RBP2.49□□□□□ -2.01
VPS50-209ENST00000467326 IGHV3-72A0A0B4J1Y9 119 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 IGHV5-51A0A0C4DH38 117 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 IGHV7-4-1A0A0J9YVY3 117 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 A0A1B0GVG6 124 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 C9orf170A2RU37 121 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 TMX2-CTNND1H3BSU7 103 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 FSTL3O95633 263 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 OR2H2O95918 312 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 INSP01308 110 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 IFNA17P01571 189 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 PRB2P02812 416 aaPredicted RBP2.49□□□□□ -2.01
VPS50-209ENST00000467326 SRP19P09132 144 aaKnown RBP2.49□□□□□ -2.01
VPS50-209ENST00000467326 IGHV1-8P0DP01 117 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 RPS3P23396 243 aaKnown RBP eCLIP2.49□□□□□ -2.01
VPS50-209ENST00000467326 CCR2P41597 374 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 GABRA2P47869 451 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 LINC00313P59037 77 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 TAS2R45P59539 299 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 NCS1P62166 190 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 FKBP1AP62942 108 aaKnown RBP2.49□□□□□ -2.01
VPS50-209ENST00000467326 PDGFRLQ15198 375 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 LAIR2Q6ISS4 152 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 TIFABQ6ZNK6 161 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 PDZD9Q8IXQ8 264 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 C8orf59Q8N0T1 100 aaPredicted RBP2.49□□□□□ -2.01
VPS50-209ENST00000467326 CEND1Q8N111 149 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 EXOC3-AS1Q8N2X6 119 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 ZNF664Q8N3J9 261 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 OR4K5Q8NGD3 323 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 OR51T1Q8NGJ9 327 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 ZNF799Q96GE5 643 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 NARS2Q96I59 477 aaKnown RBP2.49□□□□□ -2.01
VPS50-209ENST00000467326 IMMP1LQ96LU5 166 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 HDHD3Q9BSH5 251 aaPredicted RBP2.49□□□□□ -2.01
VPS50-209ENST00000467326 CHCHD7Q9BUK0 85 aa2.49□□□□□ -2.01
VPS50-209ENST00000467326 C1QTNF6Q9BXI9 259 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms