RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 ZNF257Q9Y2Q1 563 aa11.99□□□□□ -0.49
NPHP4-205ENST00000466897 CLPSL1A2RUU4 121 aa11.98□□□□□ -0.49
NPHP4-205ENST00000466897 C7orf66A4D0T2 115 aa11.98□□□□□ -0.49
NPHP4-205ENST00000466897 SH2D7A6NKC9 451 aaPredicted RBP11.98□□□□□ -0.49
NPHP4-205ENST00000466897 VDAC2P45880 294 aaPredicted RBP11.98□□□□□ -0.49
NPHP4-205ENST00000466897 FXYD3Q14802 87 aa11.98□□□□□ -0.49
NPHP4-205ENST00000466897 TNXAQ16473 311 aa11.98□□□□□ -0.49
NPHP4-205ENST00000466897 C9orf152Q5JTZ5 239 aa11.98□□□□□ -0.49
NPHP4-205ENST00000466897 LYZL2Q7Z4W2 148 aa11.98□□□□□ -0.49
NPHP4-205ENST00000466897 OR5B3Q8NH48 314 aa11.98□□□□□ -0.49
NPHP4-205ENST00000466897 SGMS2Q8NHU3 365 aa11.98□□□□□ -0.49
NPHP4-205ENST00000466897 RNASE11Q8TAA1 199 aaKnown RBP11.98□□□□□ -0.49
NPHP4-205ENST00000466897 SRSF12Q8WXF0 261 aaKnown RBP11.98□□□□□ -0.49
NPHP4-205ENST00000466897 TMEM68Q96MH6 324 aa11.98□□□□□ -0.49
NPHP4-205ENST00000466897 CLCC1Q96S66 551 aa11.98□□□□□ -0.49
NPHP4-205ENST00000466897 SRSF8Q9BRL6 282 aaKnown RBP11.98□□□□□ -0.49
NPHP4-205ENST00000466897 GON7Q9BXV9 100 aa11.98□□□□□ -0.49
NPHP4-205ENST00000466897 WNT10AQ9GZT5 417 aa11.98□□□□□ -0.49
NPHP4-205ENST00000466897 TRAV3A0A0B4J244 114 aa11.97□□□□□ -0.49
NPHP4-205ENST00000466897 A0A0G2JRQ6 117 aa11.97□□□□□ -0.49
NPHP4-205ENST00000466897 A0A1B0GU03 582 aa11.97□□□□□ -0.49
NPHP4-205ENST00000466897 ATP6V0E1O15342 81 aa11.97□□□□□ -0.49
NPHP4-205ENST00000466897 CNIH1O95406 144 aa11.97□□□□□ -0.49
NPHP4-205ENST00000466897 EGR2P11161 476 aaPredicted RBP11.97□□□□□ -0.49
NPHP4-205ENST00000466897 TATDN3Q17R31 274 aa11.97□□□□□ -0.49
NPHP4-205ENST00000466897 AKIRIN2Q53H80 203 aa11.97□□□□□ -0.49
NPHP4-205ENST00000466897 C19orf54Q5BKX5 351 aa11.97□□□□□ -0.49
NPHP4-205ENST00000466897 ARSJQ5FYB0 599 aaPredicted RBP11.97□□□□□ -0.49
NPHP4-205ENST00000466897 OR4A16Q8NH70 328 aa11.97□□□□□ -0.49
NPHP4-205ENST00000466897 GPR146Q96CH1 333 aa11.97□□□□□ -0.49
NPHP4-205ENST00000466897 SPIN2AQ99865 258 aa11.97□□□□□ -0.49
NPHP4-205ENST00000466897 SPIN2BQ9BPZ2 258 aa11.97□□□□□ -0.49
NPHP4-205ENST00000466897 COMMD5Q9GZQ3 224 aa11.97□□□□□ -0.49
NPHP4-205ENST00000466897 A0A0B4J293 547 aa11.96□□□□□ -0.49
NPHP4-205ENST00000466897 LINC01548A6NM66 108 aa11.96□□□□□ -0.49
NPHP4-205ENST00000466897 SULT1A3P0DMM9 295 aa11.96□□□□□ -0.49
NPHP4-205ENST00000466897 SULT1A4P0DMN0 295 aa11.96□□□□□ -0.49
NPHP4-205ENST00000466897 RPL27AP46776 148 aaKnown RBP11.96□□□□□ -0.49
NPHP4-205ENST00000466897 PROK1P58294 105 aa11.96□□□□□ -0.49
NPHP4-205ENST00000466897 GNB1P62873 340 aa11.96□□□□□ -0.49
NPHP4-205ENST00000466897 TMEM267Q0VDI3 215 aaPredicted RBP11.96□□□□□ -0.49
NPHP4-205ENST00000466897 SMCO1Q147U7 214 aa11.96□□□□□ -0.49
NPHP4-205ENST00000466897 PDLIM3Q53GG5 364 aaPredicted RBP11.96□□□□□ -0.49
NPHP4-205ENST00000466897 Q6ZRM9 215 aa11.96□□□□□ -0.49
NPHP4-205ENST00000466897 HSD17B13Q7Z5P4 300 aaPredicted RBP11.96□□□□□ -0.49
NPHP4-205ENST00000466897 STPG2Q8N412 459 aa11.96□□□□□ -0.49
NPHP4-205ENST00000466897 C12orf45Q8N5I9 185 aaPredicted RBP11.96□□□□□ -0.49
NPHP4-205ENST00000466897 OR1L8Q8NGR8 309 aa11.96□□□□□ -0.49
NPHP4-205ENST00000466897 OR52E5Q8NH55 327 aa11.96□□□□□ -0.49
NPHP4-205ENST00000466897 C19orf24Q9BVV8 132 aa11.96□□□□□ -0.49
NPHP4-205ENST00000466897 PARP11Q9NR21 331 aa11.96□□□□□ -0.49
NPHP4-205ENST00000466897 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.96□□□□□ -0.49
NPHP4-205ENST00000466897 FBXO7Q9Y3I1 522 aa11.96□□□□□ -0.49
NPHP4-205ENST00000466897 IFNA21P01568 189 aa11.95□□□□□ -0.5
NPHP4-205ENST00000466897 MDKP21741 143 aaPredicted RBP11.95□□□□□ -0.5
NPHP4-205ENST00000466897 OR2B8PP59922 312 aa11.95□□□□□ -0.5
NPHP4-205ENST00000466897 CFHR3Q02985 330 aa11.95□□□□□ -0.5
NPHP4-205ENST00000466897 TMEM95Q3KNT9 176 aa11.95□□□□□ -0.5
NPHP4-205ENST00000466897 GGNBP1Q5YKI7 109 aa11.95□□□□□ -0.5
NPHP4-205ENST00000466897 WIPF2Q8TF74 440 aaPredicted RBP11.95□□□□□ -0.5
NPHP4-205ENST00000466897 TAF15Q92804 592 aaKnown RBP eCLIP11.95□□□□□ -0.5
NPHP4-205ENST00000466897 QTRT1Q9BXR0 403 aaKnown RBP11.95□□□□□ -0.5
NPHP4-205ENST00000466897 NDUFA4L2Q9NRX3 87 aa11.95□□□□□ -0.5
NPHP4-205ENST00000466897 CACNG5Q9UF02 275 aa11.95□□□□□ -0.5
NPHP4-205ENST00000466897 NSG2Q9Y328 171 aa11.95□□□□□ -0.5
NPHP4-205ENST00000466897 RNF114Q9Y508 228 aa11.95□□□□□ -0.5
NPHP4-205ENST00000466897 OR51B2Q9Y5P1 312 aa11.95□□□□□ -0.5
NPHP4-205ENST00000466897 ATRQ13535 2644 aa11.95□□□□□ -0.5
NPHP4-205ENST00000466897 TRAV41A0A0B4J266 112 aa11.94□□□□□ -0.5
NPHP4-205ENST00000466897 TEX50A0A1B0GTY4 177 aa11.94□□□□□ -0.5
NPHP4-205ENST00000466897 CGB1A6NKQ9 187 aa11.94□□□□□ -0.5
NPHP4-205ENST00000466897 TEX22C9J3V5 150 aa11.94□□□□□ -0.5
NPHP4-205ENST00000466897 INS-IGF2F8WCM5 200 aa11.94□□□□□ -0.5
NPHP4-205ENST00000466897 PITX3O75364 302 aa11.94□□□□□ -0.5
NPHP4-205ENST00000466897 HOXB5P09067 269 aa11.94□□□□□ -0.5
NPHP4-205ENST00000466897 HSPE1P61604 102 aaKnown RBP11.94□□□□□ -0.5
NPHP4-205ENST00000466897 PRCDQ00LT1 54 aa11.94□□□□□ -0.5
NPHP4-205ENST00000466897 IZUMO4Q1ZYL8 232 aa11.94□□□□□ -0.5
NPHP4-205ENST00000466897 C10orf55Q5SWW7 151 aa11.94□□□□□ -0.5
NPHP4-205ENST00000466897 GRPEL2Q8TAA5 225 aa11.94□□□□□ -0.5
NPHP4-205ENST00000466897 FBN1P35555 2871 aaKnown RBP11.93□□□□□ -0.5
NPHP4-205ENST00000466897 A0A1B0GW64 132 aa11.93□□□□□ -0.5
NPHP4-205ENST00000466897 MSGN1A6NI15 193 aa11.93□□□□□ -0.5
NPHP4-205ENST00000466897 FAM90A26D6RGX4 464 aa11.93□□□□□ -0.5
NPHP4-205ENST00000466897 E7EUB6 86 aa11.93□□□□□ -0.5
NPHP4-205ENST00000466897 ST8SIA3O43173 380 aa11.93□□□□□ -0.5
NPHP4-205ENST00000466897 RBMXL2O75526 392 aaKnown RBP11.93□□□□□ -0.5
NPHP4-205ENST00000466897 ADAP1O75689 374 aa11.93□□□□□ -0.5
NPHP4-205ENST00000466897 BRI3O95415 125 aa11.93□□□□□ -0.5
NPHP4-205ENST00000466897 TRAPPC2P0DI81 140 aa11.93□□□□□ -0.5
NPHP4-205ENST00000466897 TRAPPC2BP0DI82 140 aa11.93□□□□□ -0.5
NPHP4-205ENST00000466897 PPIFP30405 207 aaKnown RBP11.93□□□□□ -0.5
NPHP4-205ENST00000466897 SLC35B1P78383 322 aa11.93□□□□□ -0.5
NPHP4-205ENST00000466897 AWAT1Q58HT5 328 aa11.93□□□□□ -0.5
NPHP4-205ENST00000466897 MRPL41Q8IXM3 137 aaKnown RBP11.93□□□□□ -0.5
NPHP4-205ENST00000466897 COMMD1Q8N668 190 aa11.93□□□□□ -0.5
NPHP4-205ENST00000466897 ABHD5Q8WTS1 349 aa11.93□□□□□ -0.5
NPHP4-205ENST00000466897 NOL4LQ96MY1 436 aaPredicted RBP11.93□□□□□ -0.5
NPHP4-205ENST00000466897 PDCD10Q9BUL8 212 aa11.93□□□□□ -0.5
NPHP4-205ENST00000466897 A0A1W2PN81 502 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms