RNA–Protein interactions for RNA: ENST00000466892.5

HLA-C-205, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-205ENST00000466892 Q6ZS46 218 aa12.89□□□□□ -0.35
HLA-C-205ENST00000466892 HSD17B13Q7Z5P4 300 aaPredicted RBP12.89□□□□□ -0.35
HLA-C-205ENST00000466892 RNASE11Q8TAA1 199 aaKnown RBP12.89□□□□□ -0.35
HLA-C-205ENST00000466892 CASTOR1Q8WTX7 329 aa12.89□□□□□ -0.35
HLA-C-205ENST00000466892 CLCC1Q96S66 551 aa12.89□□□□□ -0.35
HLA-C-205ENST00000466892 TMEM14BQ9NUH8 114 aa12.89□□□□□ -0.35
HLA-C-205ENST00000466892 FOXA2Q9Y261 457 aaPredicted RBP12.89□□□□□ -0.35
HLA-C-205ENST00000466892 ATP6V0E1O15342 81 aa12.88□□□□□ -0.35
HLA-C-205ENST00000466892 SLC35B1P78383 322 aa12.88□□□□□ -0.35
HLA-C-205ENST00000466892 SSBP2P81877 361 aaPredicted RBP12.88□□□□□ -0.35
HLA-C-205ENST00000466892 PJVKQ0ZLH3 352 aa12.88□□□□□ -0.35
HLA-C-205ENST00000466892 AKIRIN2Q53H80 203 aa12.88□□□□□ -0.35
HLA-C-205ENST00000466892 NMSQ5H8A3 153 aa12.88□□□□□ -0.35
HLA-C-205ENST00000466892 STPG2Q8N412 459 aa12.88□□□□□ -0.35
HLA-C-205ENST00000466892 COMMD1Q8N668 190 aa12.88□□□□□ -0.35
HLA-C-205ENST00000466892 OR4A16Q8NH70 328 aa12.88□□□□□ -0.35
HLA-C-205ENST00000466892 SRSF12Q8WXF0 261 aaKnown RBP12.88□□□□□ -0.35
HLA-C-205ENST00000466892 PARP11Q9NR21 331 aa12.88□□□□□ -0.35
HLA-C-205ENST00000466892 RNF114Q9Y508 228 aa12.88□□□□□ -0.35
HLA-C-205ENST00000466892 C2CD3Q4AC94 2353 aa12.87□□□□□ -0.35
HLA-C-205ENST00000466892 SH2D7A6NKC9 451 aaPredicted RBP12.87□□□□□ -0.35
HLA-C-205ENST00000466892 RPL27AP46776 148 aaKnown RBP12.87□□□□□ -0.35
HLA-C-205ENST00000466892 PROK1P58294 105 aa12.87□□□□□ -0.35
HLA-C-205ENST00000466892 GNB1P62873 340 aa12.87□□□□□ -0.35
HLA-C-205ENST00000466892 NDPQ00604 133 aa12.87□□□□□ -0.35
HLA-C-205ENST00000466892 OXA1LQ15070 435 aa12.87□□□□□ -0.35
HLA-C-205ENST00000466892 MRPL41Q8IXM3 137 aaKnown RBP12.87□□□□□ -0.35
HLA-C-205ENST00000466892 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.87□□□□□ -0.35
HLA-C-205ENST00000466892 TRAV41A0A0B4J266 112 aa12.86□□□□□ -0.35
HLA-C-205ENST00000466892 A0A1B0GU03 582 aa12.86□□□□□ -0.35
HLA-C-205ENST00000466892 IFNA21P01568 189 aa12.86□□□□□ -0.35
HLA-C-205ENST00000466892 OR9G9P0C7N8 305 aa12.86□□□□□ -0.35
HLA-C-205ENST00000466892 MDKP21741 143 aaPredicted RBP12.86□□□□□ -0.35
HLA-C-205ENST00000466892 OR2B8PP59922 312 aa12.86□□□□□ -0.35
HLA-C-205ENST00000466892 PDLIM3Q53GG5 364 aaPredicted RBP12.86□□□□□ -0.35
HLA-C-205ENST00000466892 LYZL2Q7Z4W2 148 aa12.86□□□□□ -0.35
HLA-C-205ENST00000466892 OR1L8Q8NGR8 309 aa12.86□□□□□ -0.35
HLA-C-205ENST00000466892 OR52E5Q8NH55 327 aa12.86□□□□□ -0.35
HLA-C-205ENST00000466892 QTRT1Q9BXR0 403 aaKnown RBP12.86□□□□□ -0.35
HLA-C-205ENST00000466892 ATRQ13535 2644 aa12.85□□□□□ -0.35
HLA-C-205ENST00000466892 TRAV3A0A0B4J244 114 aa12.85□□□□□ -0.35
HLA-C-205ENST00000466892 A0A0B4J293 547 aa12.85□□□□□ -0.35
HLA-C-205ENST00000466892 DBX1A6NMT0 343 aa12.85□□□□□ -0.35
HLA-C-205ENST00000466892 RBMXL2O75526 392 aaKnown RBP12.85□□□□□ -0.35
HLA-C-205ENST00000466892 BRI3O95415 125 aa12.85□□□□□ -0.35
HLA-C-205ENST00000466892 SULT1A3P0DMM9 295 aa12.85□□□□□ -0.35
HLA-C-205ENST00000466892 SULT1A4P0DMN0 295 aa12.85□□□□□ -0.35
HLA-C-205ENST00000466892 EGR2P11161 476 aaPredicted RBP12.85□□□□□ -0.35
HLA-C-205ENST00000466892 HSPE1P61604 102 aaKnown RBP12.85□□□□□ -0.35
HLA-C-205ENST00000466892 CFHR3Q02985 330 aa12.85□□□□□ -0.35
HLA-C-205ENST00000466892 SMCO1Q147U7 214 aa12.85□□□□□ -0.35
HLA-C-205ENST00000466892 AWAT1Q58HT5 328 aa12.85□□□□□ -0.35
HLA-C-205ENST00000466892 C19orf54Q5BKX5 351 aa12.85□□□□□ -0.35
HLA-C-205ENST00000466892 C12orf45Q8N5I9 185 aaPredicted RBP12.85□□□□□ -0.35
HLA-C-205ENST00000466892 OR5M8Q8NGP6 311 aa12.85□□□□□ -0.35
HLA-C-205ENST00000466892 GRPEL2Q8TAA5 225 aa12.85□□□□□ -0.35
HLA-C-205ENST00000466892 WIPF2Q8TF74 440 aaPredicted RBP12.85□□□□□ -0.35
HLA-C-205ENST00000466892 ABHD5Q8WTS1 349 aa12.85□□□□□ -0.35
HLA-C-205ENST00000466892 PDCD10Q9BUL8 212 aa12.85□□□□□ -0.35
HLA-C-205ENST00000466892 OR51B2Q9Y5P1 312 aa12.85□□□□□ -0.35
HLA-C-205ENST00000466892 A0A0G2JRQ6 117 aa12.84□□□□□ -0.35
HLA-C-205ENST00000466892 C7orf66A4D0T2 115 aa12.84□□□□□ -0.35
HLA-C-205ENST00000466892 PSMB11A5LHX3 300 aa12.84□□□□□ -0.35
HLA-C-205ENST00000466892 MSGN1A6NI15 193 aa12.84□□□□□ -0.35
HLA-C-205ENST00000466892 LINC01548A6NM66 108 aa12.84□□□□□ -0.35
HLA-C-205ENST00000466892 INS-IGF2F8WCM5 200 aa12.84□□□□□ -0.35
HLA-C-205ENST00000466892 H3BUA1 57 aa12.84□□□□□ -0.35
HLA-C-205ENST00000466892 TRAPPC2P0DI81 140 aa12.84□□□□□ -0.35
HLA-C-205ENST00000466892 TRAPPC2BP0DI82 140 aa12.84□□□□□ -0.35
HLA-C-205ENST00000466892 PPIFP30405 207 aaKnown RBP12.84□□□□□ -0.35
HLA-C-205ENST00000466892 TMEM95Q3KNT9 176 aa12.84□□□□□ -0.35
HLA-C-205ENST00000466892 CENPVQ7Z7K6 275 aaPredicted RBP12.84□□□□□ -0.35
HLA-C-205ENST00000466892 KLHDC1Q8N7A1 406 aa12.84□□□□□ -0.35
HLA-C-205ENST00000466892 OR52B4Q8NGK2 314 aa12.84□□□□□ -0.35
HLA-C-205ENST00000466892 GPR146Q96CH1 333 aa12.84□□□□□ -0.35
HLA-C-205ENST00000466892 SEC22CQ9BRL7 303 aa12.84□□□□□ -0.35
HLA-C-205ENST00000466892 NDUFA4L2Q9NRX3 87 aa12.84□□□□□ -0.35
HLA-C-205ENST00000466892 PRR13Q9NZ81 148 aa12.84□□□□□ -0.35
HLA-C-205ENST00000466892 CACNG5Q9UF02 275 aa12.84□□□□□ -0.35
HLA-C-205ENST00000466892 FBXO7Q9Y3I1 522 aa12.84□□□□□ -0.35
HLA-C-205ENST00000466892 TEX50A0A1B0GTY4 177 aa12.83□□□□□ -0.36
HLA-C-205ENST00000466892 A0A1W2PN81 502 aa12.83□□□□□ -0.36
HLA-C-205ENST00000466892 TEX22C9J3V5 150 aa12.83□□□□□ -0.36
HLA-C-205ENST00000466892 FAM90A26D6RGX4 464 aa12.83□□□□□ -0.36
HLA-C-205ENST00000466892 IGHG4P01861 327 aa12.83□□□□□ -0.36
HLA-C-205ENST00000466892 SPNP16150 400 aa12.83□□□□□ -0.36
HLA-C-205ENST00000466892 CHRNA7P36544 502 aa12.83□□□□□ -0.36
HLA-C-205ENST00000466892 PRCDQ00LT1 54 aa12.83□□□□□ -0.36
HLA-C-205ENST00000466892 TATDN3Q17R31 274 aa12.83□□□□□ -0.36
HLA-C-205ENST00000466892 GGNBP1Q5YKI7 109 aa12.83□□□□□ -0.36
HLA-C-205ENST00000466892 TEX38Q6PEX7 206 aa12.83□□□□□ -0.36
HLA-C-205ENST00000466892 UNQ5815/PRO19632Q6UWF5 114 aa12.83□□□□□ -0.36
HLA-C-205ENST00000466892 LFNGQ8NES3 379 aa12.83□□□□□ -0.36
HLA-C-205ENST00000466892 OR4X2Q8NGF9 303 aa12.83□□□□□ -0.36
HLA-C-205ENST00000466892 WFDC12Q8WWY7 111 aa12.83□□□□□ -0.36
HLA-C-205ENST00000466892 NOL4LQ96MY1 436 aaPredicted RBP12.83□□□□□ -0.36
HLA-C-205ENST00000466892 NSG2Q9Y328 171 aa12.83□□□□□ -0.36
HLA-C-205ENST00000466892 NPIPB5A8MRT5 1133 aa12.82□□□□□ -0.36
HLA-C-205ENST00000466892 LY86O95711 162 aa12.82□□□□□ -0.36
HLA-C-205ENST00000466892 IGLV1-40P01703 118 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms