RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 CRISP3P54108 245 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 ATP1B3P54709 279 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 UBE2MP61081 183 aaKnown RBP2.53□□□□□ -2
VPS13D-203ENST00000466732 RPS28P62857 69 aaKnown RBP2.53□□□□□ -2
VPS13D-203ENST00000466732 PSG7Q13046 419 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 ENDOGQ14249 297 aaKnown RBP2.53□□□□□ -2
VPS13D-203ENST00000466732 ELOBQ15370 118 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 SYPL1Q16563 259 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 TBC1D28Q2M2D7 210 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 CT45A1Q5HYN5 189 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 OR10J3Q5JRS4 329 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 LY6G6FQ5SQ64 297 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 AMMECR1LQ6DCA0 310 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 OPN5Q6U736 354 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 GLIPR1L1Q6UWM5 242 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 TMEM184AQ6ZMB5 413 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 LINC00336Q6ZUF6 198 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 APRG1Q8IVJ8 170 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 TTC9CQ8N5M4 171 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 COX18Q8N8Q8 333 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.53□□□□□ -2
VPS13D-203ENST00000466732 OR5A1Q8NGJ0 315 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 OR51A2Q8NGJ7 313 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 OR4X1Q8NH49 305 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 MFSD8Q8NHS3 518 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 CT45A3Q8NHU0 189 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 CNIH3Q8TBE1 160 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 RXFP2Q8WXD0 754 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 OR5P2Q8WZ92 322 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 SLAMF6Q96DU3 332 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 IP6K3Q96PC2 410 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 CHIAQ9BZP6 476 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 POLR2J3Q9H1A7 115 aaKnown RBP2.53□□□□□ -2
VPS13D-203ENST00000466732 TMEM133Q9H2Q1 129 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 SMDT1Q9H4I9 107 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 HES4Q9HCC6 221 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 ACP6Q9NPH0 428 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 TMEM9BQ9NQ34 198 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 CA10Q9NS85 328 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 PRO0628Q9UI54 55 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 YARS2Q9Y2Z4 477 aaKnown RBP2.53□□□□□ -2
VPS13D-203ENST00000466732 GBF1Q92538 1859 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 SBF2Q86WG5 1849 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 DDX60LQ5H9U9 1706 aaKnown RBP2.53□□□□□ -2
VPS13D-203ENST00000466732 PXDNQ92626 1479 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 PLIN4Q96Q06 1357 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 COL14A1Q05707 1796 aaKnown RBP2.52□□□□□ -2.01
VPS13D-203ENST00000466732 ADAMTSL1Q8N6G6 1762 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 PKD1L3Q7Z443 1732 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 DOT1LQ8TEK3 1739 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 IGHV2-26A0A0B4J1V2 119 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 A0A0B4J2E0 115 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 A0A1B0GX12 115 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 ODAMA1E959 279 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 PINLYPA6NC86 204 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 OR4C46A6NHA9 309 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 GEMIN2O14893 280 aaKnown RBP2.52□□□□□ -2.01
VPS13D-203ENST00000466732 CD5LO43866 347 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 CHST1O43916 411 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 YPEL1O60688 119 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 GCM2O75603 506 aaPredicted RBP2.52□□□□□ -2.01
VPS13D-203ENST00000466732 LIMS3P0CW19 117 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 LIMS4P0CW20 117 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 PGA4P0DJD7 388 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 PGA5P0DJD9 388 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 IGLC2P0DOY2 106 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 IGLC3P0DOY3 106 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 TPT1P13693 172 aaKnown RBP2.52□□□□□ -2.01
VPS13D-203ENST00000466732 PGCP20142 388 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 RPL12P30050 165 aaKnown RBP2.52□□□□□ -2.01
VPS13D-203ENST00000466732 ARL2P36404 184 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 CTRLP40313 264 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 P2RY1P47900 373 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 HINT1P49773 126 aaPredicted RBP2.52□□□□□ -2.01
VPS13D-203ENST00000466732 LHX2P50458 406 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 ZNF83P51522 516 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 EMP1P54849 157 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 TAS2R31P59538 309 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 TAS2R19P59542 299 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 UBE2NP61088 152 aaKnown RBP2.52□□□□□ -2.01
VPS13D-203ENST00000466732 RPS15AP62244 130 aaKnown RBP2.52□□□□□ -2.01
VPS13D-203ENST00000466732 GRB2P62993 217 aaKnown RBP2.52□□□□□ -2.01
VPS13D-203ENST00000466732 ARG2P78540 354 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 PSG9Q00887 426 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 PAFAH1B3Q15102 231 aaKnown RBP2.52□□□□□ -2.01
VPS13D-203ENST00000466732 PMVKQ15126 192 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 ZSWIM7Q19AV6 140 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 TIGITQ495A1 244 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 TP53I3Q53FA7 332 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 ACTL10Q5JWF8 245 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 SPANXN3Q5MJ09 141 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 AADACL3Q5VUY0 350 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 TMEM215Q68D42 235 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 DUX4L9Q6RFH8 374 aaPredicted RBP2.52□□□□□ -2.01
VPS13D-203ENST00000466732 Q6ZN92 141 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 TIFABQ6ZNK6 161 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 TMEM91Q6ZNR0 172 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 Q6ZSR6 202 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 FAM19A5Q7Z5A7 132 aaPredicted RBP2.52□□□□□ -2.01
VPS13D-203ENST00000466732 DEFB125Q8N687 156 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms