RNA–Protein interactions for RNA: ENST00000466694.5

NUP58-208, Transcript of nucleoporin 58, human

TSL 5

Gene NUP58, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP58-208	ENST00000466694	C15orf54	Q8N8G6	183 aa		13.82	□□□□□ -0.2
NUP58-208	ENST00000466694	OSR1	Q8TAX0	266 aa	Predicted RBP	13.82	□□□□□ -0.2
NUP58-208	ENST00000466694	TMEM170A	Q8WVE7	144 aa		13.82	□□□□□ -0.2
NUP58-208	ENST00000466694	LHX4	Q969G2	390 aa		13.82	□□□□□ -0.2
NUP58-208	ENST00000466694	C20orf24	Q9BUV8	137 aa		13.82	□□□□□ -0.2
NUP58-208	ENST00000466694	TUBA4B	Q9H853	241 aa		13.82	□□□□□ -0.2
NUP58-208	ENST00000466694	BET1L	Q9NYM9	111 aa		13.82	□□□□□ -0.2
NUP58-208	ENST00000466694	PUS1	Q9Y606	427 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
NUP58-208	ENST00000466694	SRRM4	A7MD48	611 aa	Known RBP	13.82	□□□□□ -0.2
NUP58-208	ENST00000466694		H0YJW9	148 aa		13.82	□□□□□ -0.2
NUP58-208	ENST00000466694	FBP1	P09467	338 aa		13.82	□□□□□ -0.2
NUP58-208	ENST00000466694	AKR1C3	P42330	323 aa		13.82	□□□□□ -0.2
NUP58-208	ENST00000466694		Q8N7P7	452 aa		13.82	□□□□□ -0.2
NUP58-208	ENST00000466694	OR5AN1	Q8NGI8	311 aa		13.82	□□□□□ -0.2
NUP58-208	ENST00000466694	OR10X1	Q8NGY0	326 aa		13.82	□□□□□ -0.2
NUP58-208	ENST00000466694	TMEM186	Q96B77	213 aa		13.82	□□□□□ -0.2
NUP58-208	ENST00000466694	P2RX4	Q99571	388 aa		13.82	□□□□□ -0.2
NUP58-208	ENST00000466694	ACTR3C	Q9C0K3	210 aa	Predicted RBP	13.82	□□□□□ -0.2
NUP58-208	ENST00000466694	COLCA2	A8K830	154 aa		13.81	□□□□□ -0.2
NUP58-208	ENST00000466694		H3BQ15	152 aa		13.81	□□□□□ -0.2
NUP58-208	ENST00000466694	COL8A2	P25067	703 aa		13.81	□□□□□ -0.2
NUP58-208	ENST00000466694	ACOT6	Q3I5F7	207 aa	Predicted RBP	13.81	□□□□□ -0.2
NUP58-208	ENST00000466694	SLC24A4	Q8NFF2	622 aa		13.81	□□□□□ -0.2
NUP58-208	ENST00000466694	FKBP11	Q9NYL4	201 aa		13.81	□□□□□ -0.2
NUP58-208	ENST00000466694	VAX2	Q9UIW0	290 aa		13.81	□□□□□ -0.2
NUP58-208	ENST00000466694	CACNA1B	Q00975	2339 aa		13.8	□□□□□ -0.2
NUP58-208	ENST00000466694	KBTBD11	O94819	623 aa		13.8	□□□□□ -0.2
NUP58-208	ENST00000466694	IFNA4	P05014	189 aa		13.8	□□□□□ -0.2
NUP58-208	ENST00000466694	NPY1R	P25929	384 aa		13.8	□□□□□ -0.2
NUP58-208	ENST00000466694	ZNF137P	P52743	207 aa		13.8	□□□□□ -0.2
NUP58-208	ENST00000466694	CEBPG	P53567	150 aa		13.8	□□□□□ -0.2
NUP58-208	ENST00000466694	PRCD	Q00LT1	54 aa		13.8	□□□□□ -0.2
NUP58-208	ENST00000466694	TMEM177	Q53S58	311 aa		13.8	□□□□□ -0.2
NUP58-208	ENST00000466694	TREML4	Q6UXN2	200 aa		13.8	□□□□□ -0.2
NUP58-208	ENST00000466694	RBMS3	Q6XE24	437 aa	Known RBP	13.8	□□□□□ -0.2
NUP58-208	ENST00000466694	SLC25A22	Q9H936	323 aa		13.8	□□□□□ -0.2
NUP58-208	ENST00000466694	SPTBN1	Q01082	2364 aa	Known RBP	13.8	□□□□□ -0.2
NUP58-208	ENST00000466694	SMCO3	A2RU48	225 aa		13.8	□□□□□ -0.2
NUP58-208	ENST00000466694	CYB5B	O43169	146 aa		13.8	□□□□□ -0.2
NUP58-208	ENST00000466694	IGHV2-70	P01814	119 aa		13.8	□□□□□ -0.2
NUP58-208	ENST00000466694	SAA1	P0DJI8	122 aa	Predicted RBP	13.8	□□□□□ -0.2
NUP58-208	ENST00000466694	IGHV1-8	P0DP01	117 aa		13.8	□□□□□ -0.2
NUP58-208	ENST00000466694	FLI1	Q01543	452 aa	Predicted RBP	13.8	□□□□□ -0.2
NUP58-208	ENST00000466694	OR9G1	Q8NH87	305 aa		13.8	□□□□□ -0.2
NUP58-208	ENST00000466694	ST6GALNAC6	Q969X2	333 aa		13.8	□□□□□ -0.2
NUP58-208	ENST00000466694	RALY	Q9UKM9	306 aa	Known RBP	13.8	□□□□□ -0.2
NUP58-208	ENST00000466694	LYNX1	G3V0Z9	82 aa		13.79	□□□□□ -0.2
NUP58-208	ENST00000466694	LYNX1	P0DP58	116 aa		13.79	□□□□□ -0.2
NUP58-208	ENST00000466694	AGA	P20933	346 aa		13.79	□□□□□ -0.2
NUP58-208	ENST00000466694	TAGLN2	P37802	199 aa	Known RBP	13.79	□□□□□ -0.2
NUP58-208	ENST00000466694	OPRK1	P41145	380 aa		13.79	□□□□□ -0.2
NUP58-208	ENST00000466694	FAM122C	Q6P4D5	195 aa		13.79	□□□□□ -0.2
NUP58-208	ENST00000466694	PDPN	Q86YL7	162 aa		13.79	□□□□□ -0.2
NUP58-208	ENST00000466694	ITLN2	Q8WWU7	325 aa	Predicted RBP	13.79	□□□□□ -0.2
NUP58-208	ENST00000466694	HARBI1	Q96MB7	349 aa		13.79	□□□□□ -0.2
NUP58-208	ENST00000466694	NABP2	Q9BQ15	211 aa		13.79	□□□□□ -0.2
NUP58-208	ENST00000466694	NIPSNAP3B	Q9BS92	247 aa		13.79	□□□□□ -0.2
NUP58-208	ENST00000466694	PLEKHA3	Q9HB20	300 aa		13.79	□□□□□ -0.2
NUP58-208	ENST00000466694	CA2	P00918	260 aa		13.78	□□□□□ -0.2
NUP58-208	ENST00000466694	MYOD1	P15172	320 aa		13.78	□□□□□ -0.2
NUP58-208	ENST00000466694	FAM90A2P	Q658T7	463 aa		13.78	□□□□□ -0.2
NUP58-208	ENST00000466694	SLC35E3	Q7Z769	313 aa		13.78	□□□□□ -0.2
NUP58-208	ENST00000466694	C11orf42	Q8N5U0	333 aa		13.78	□□□□□ -0.2
NUP58-208	ENST00000466694	OR5B3	Q8NH48	314 aa		13.78	□□□□□ -0.2
NUP58-208	ENST00000466694	RAB24	Q969Q5	203 aa		13.78	□□□□□ -0.2
NUP58-208	ENST00000466694	FLYWCH2	Q96CP2	140 aa	Known RBP	13.78	□□□□□ -0.2
NUP58-208	ENST00000466694	TVP23C	Q96ET8	276 aa		13.78	□□□□□ -0.2
NUP58-208	ENST00000466694	PCGF1	Q9BSM1	259 aa		13.78	□□□□□ -0.2
NUP58-208	ENST00000466694	NPVF	Q9HCQ7	196 aa		13.78	□□□□□ -0.2
NUP58-208	ENST00000466694	TEX50	A0A1B0GTY4	177 aa		13.78	□□□□□ -0.2
NUP58-208	ENST00000466694	SEC14L6	B5MCN3	397 aa		13.78	□□□□□ -0.2
NUP58-208	ENST00000466694	REG1B	P48304	166 aa		13.78	□□□□□ -0.2
NUP58-208	ENST00000466694	ATP5I	P56385	69 aa	Predicted RBP	13.78	□□□□□ -0.2
NUP58-208	ENST00000466694	AVPI1	Q5T686	147 aa		13.78	□□□□□ -0.2
NUP58-208	ENST00000466694	ZNF841	Q6ZN19	808 aa		13.78	□□□□□ -0.2
NUP58-208	ENST00000466694	OR4C13	Q8NGP0	309 aa		13.78	□□□□□ -0.2
NUP58-208	ENST00000466694	MGST2	Q99735	147 aa		13.78	□□□□□ -0.2
NUP58-208	ENST00000466694	HINT2	Q9BX68	163 aa		13.78	□□□□□ -0.2
NUP58-208	ENST00000466694	TMEM133	Q9H2Q1	129 aa		13.78	□□□□□ -0.2
NUP58-208	ENST00000466694	MLX	Q9UH92	298 aa		13.78	□□□□□ -0.2
NUP58-208	ENST00000466694	ABCA4	P78363	2273 aa		13.77	□□□□□ -0.2
NUP58-208	ENST00000466694	FNDC10	F2Z333	226 aa		13.77	□□□□□ -0.21
NUP58-208	ENST00000466694	NDUFS6	O75380	124 aa	Known RBP	13.77	□□□□□ -0.21
NUP58-208	ENST00000466694	EIF3G	O75821	320 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
NUP58-208	ENST00000466694	FOLR2	P14207	255 aa		13.77	□□□□□ -0.21
NUP58-208	ENST00000466694	IL3RA	P26951	378 aa		13.77	□□□□□ -0.21
NUP58-208	ENST00000466694	CDC34	P49427	236 aa	Predicted RBP	13.77	□□□□□ -0.21
NUP58-208	ENST00000466694	OR4A5	Q8NH83	315 aa		13.77	□□□□□ -0.21
NUP58-208	ENST00000466694	RAB1B	Q9H0U4	201 aa		13.77	□□□□□ -0.21
NUP58-208	ENST00000466694	MANBAL	Q9NQG1	85 aa		13.77	□□□□□ -0.21
NUP58-208	ENST00000466694	KCNIP2	Q9NS61	270 aa		13.77	□□□□□ -0.21
NUP58-208	ENST00000466694	LSM4	Q9Y4Z0	139 aa	Known RBP	13.77	□□□□□ -0.21
NUP58-208	ENST00000466694	HRNR	Q86YZ3	2850 aa	Predicted RBP	13.76	□□□□□ -0.21
NUP58-208	ENST00000466694	HMGB3	O15347	200 aa	Known RBP	13.76	□□□□□ -0.21
NUP58-208	ENST00000466694	ARSJ	Q5FYB0	599 aa	Predicted RBP	13.76	□□□□□ -0.21
NUP58-208	ENST00000466694	RAB1C	Q92928	201 aa		13.76	□□□□□ -0.21
NUP58-208	ENST00000466694	TNFRSF14	Q92956	283 aa		13.76	□□□□□ -0.21
NUP58-208	ENST00000466694	HIST1H2BA	Q96A08	127 aa		13.76	□□□□□ -0.21
NUP58-208	ENST00000466694	NEIL1	Q96FI4	390 aa	Predicted RBP	13.76	□□□□□ -0.21
NUP58-208	ENST00000466694	GGTLC1	Q9BX51	225 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms