RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 MED9Q9NWA0 146 aa1.17□□□□□ -2.22
LRCH3-211ENST00000466054 NAT8Q9UHE5 227 aa1.17□□□□□ -2.22
LRCH3-211ENST00000466054 PXMP4Q9Y6I8 212 aa1.17□□□□□ -2.22
LRCH3-211ENST00000466054 PCDH15Q96QU1 1955 aa1.16□□□□□ -2.22
LRCH3-211ENST00000466054 IGKV3D-7A0A0C4DH55 119 aa1.16□□□□□ -2.22
LRCH3-211ENST00000466054 IGKV3OR2-268A0A0C4DH90 116 aa1.16□□□□□ -2.22
LRCH3-211ENST00000466054 TRAPPC13A5PLN9 417 aa1.16□□□□□ -2.22
LRCH3-211ENST00000466054 LST1O00453 97 aa1.16□□□□□ -2.22
LRCH3-211ENST00000466054 CETN3O15182 167 aa1.16□□□□□ -2.22
LRCH3-211ENST00000466054 LEPROTO15243 131 aa1.16□□□□□ -2.22
LRCH3-211ENST00000466054 SLC16A4O15374 487 aa1.16□□□□□ -2.22
LRCH3-211ENST00000466054 REG1AP05451 166 aa1.16□□□□□ -2.22
LRCH3-211ENST00000466054 RPSAP08865 295 aaKnown RBP1.16□□□□□ -2.22
LRCH3-211ENST00000466054 CSN1S1P47710 185 aa1.16□□□□□ -2.22
LRCH3-211ENST00000466054 RAB13P51153 203 aa1.16□□□□□ -2.22
LRCH3-211ENST00000466054 CAV1Q03135 178 aa1.16□□□□□ -2.22
LRCH3-211ENST00000466054 FABP9Q0Z7S8 132 aa1.16□□□□□ -2.22
LRCH3-211ENST00000466054 ELOBQ15370 118 aa1.16□□□□□ -2.22
LRCH3-211ENST00000466054 MOGQ16653 247 aa1.16□□□□□ -2.22
LRCH3-211ENST00000466054 Q1T7F1 81 aa1.16□□□□□ -2.22
LRCH3-211ENST00000466054 OGFRL1Q5TC84 451 aaPredicted RBP1.16□□□□□ -2.22
LRCH3-211ENST00000466054 ZNF550Q7Z398 422 aa1.16□□□□□ -2.22
LRCH3-211ENST00000466054 DCXRQ7Z4W1 244 aa1.16□□□□□ -2.22
LRCH3-211ENST00000466054 ACOT12Q8WYK0 555 aa1.16□□□□□ -2.22
LRCH3-211ENST00000466054 FGFR1OP2Q9NVK5 253 aa1.16□□□□□ -2.22
LRCH3-211ENST00000466054 USE1Q9NZ43 259 aa1.16□□□□□ -2.22
LRCH3-211ENST00000466054 C3orf18Q9UK00 162 aa1.16□□□□□ -2.22
LRCH3-211ENST00000466054 M0QZ92 97 aa1.15□□□□□ -2.23
LRCH3-211ENST00000466054 CXCR6O00574 342 aa1.15□□□□□ -2.23
LRCH3-211ENST00000466054 PPBPP02775 128 aa1.15□□□□□ -2.23
LRCH3-211ENST00000466054 IL9P15248 144 aa1.15□□□□□ -2.23
LRCH3-211ENST00000466054 MAGEA2P43356 314 aa1.15□□□□□ -2.23
LRCH3-211ENST00000466054 BLVRAP53004 296 aa1.15□□□□□ -2.23
LRCH3-211ENST00000466054 RSU1Q15404 277 aa1.15□□□□□ -2.23
LRCH3-211ENST00000466054 ARHGAP11BQ3KRB8 267 aa1.15□□□□□ -2.23
LRCH3-211ENST00000466054 KRTAP5-10Q6L8G5 202 aa1.15□□□□□ -2.23
LRCH3-211ENST00000466054 ANGPT4Q9Y264 503 aa1.15□□□□□ -2.23
LRCH3-211ENST00000466054 IGKV1D-43A0A0B4J1Z2 117 aa1.14□□□□□ -2.23
LRCH3-211ENST00000466054 ORC5O43913 435 aa1.14□□□□□ -2.23
LRCH3-211ENST00000466054 C1QAP02745 245 aa1.14□□□□□ -2.23
LRCH3-211ENST00000466054 TPM3P06753 285 aa1.14□□□□□ -2.23
LRCH3-211ENST00000466054 SRP19P09132 144 aaKnown RBP1.14□□□□□ -2.23
LRCH3-211ENST00000466054 TRGC1P0CF51 173 aa1.14□□□□□ -2.23
LRCH3-211ENST00000466054 DEFA4P12838 97 aa1.14□□□□□ -2.23
LRCH3-211ENST00000466054 UCHL3P15374 230 aa1.14□□□□□ -2.23
LRCH3-211ENST00000466054 G6PCP35575 357 aa1.14□□□□□ -2.23
LRCH3-211ENST00000466054 OR4D2P58180 307 aa1.14□□□□□ -2.23
LRCH3-211ENST00000466054 KRTAP10-4P60372 401 aaPredicted RBP1.14□□□□□ -2.23
LRCH3-211ENST00000466054 EMX1Q04741 257 aaPredicted RBP1.14□□□□□ -2.23
LRCH3-211ENST00000466054 NDUFA5Q16718 116 aa1.14□□□□□ -2.23
LRCH3-211ENST00000466054 CLVS2Q5SYC1 327 aa1.14□□□□□ -2.23
LRCH3-211ENST00000466054 C1orf195Q5TG92 126 aa1.14□□□□□ -2.23
LRCH3-211ENST00000466054 ANKRD7Q92527 254 aa1.14□□□□□ -2.23
LRCH3-211ENST00000466054 DIRAS2Q96HU8 199 aa1.14□□□□□ -2.23
LRCH3-211ENST00000466054 NKIRAS1Q9NYS0 192 aa1.14□□□□□ -2.23
LRCH3-211ENST00000466054 TIMM22Q9Y584 194 aa1.14□□□□□ -2.23
LRCH3-211ENST00000466054 ATP6V1DQ9Y5K8 247 aa1.14□□□□□ -2.23
LRCH3-211ENST00000466054 IGKV3-7A0A075B6H7 116 aa1.13□□□□□ -2.23
LRCH3-211ENST00000466054 TRBV10-2A0A0K0K1G8 114 aa1.13□□□□□ -2.23
LRCH3-211ENST00000466054 LRRN3E7EW58 273 aa1.13□□□□□ -2.23
LRCH3-211ENST00000466054 H0Y980 276 aa1.13□□□□□ -2.23
LRCH3-211ENST00000466054 I3L521 148 aa1.13□□□□□ -2.23
LRCH3-211ENST00000466054 DEXIO95424 95 aa1.13□□□□□ -2.23
LRCH3-211ENST00000466054 FGF6P10767 208 aa1.13□□□□□ -2.23
LRCH3-211ENST00000466054 KCNE1P15382 129 aa1.13□□□□□ -2.23
LRCH3-211ENST00000466054 NFYAP23511 347 aaPredicted RBP1.13□□□□□ -2.23
LRCH3-211ENST00000466054 S100A7P31151 101 aa1.13□□□□□ -2.23
LRCH3-211ENST00000466054 CCR7P32248 378 aa1.13□□□□□ -2.23
LRCH3-211ENST00000466054 MARCKSL1P49006 195 aa1.13□□□□□ -2.23
LRCH3-211ENST00000466054 TPM4P67936 248 aa1.13□□□□□ -2.23
LRCH3-211ENST00000466054 DMTNQ08495 405 aa1.13□□□□□ -2.23
LRCH3-211ENST00000466054 FAM27BQ5VT28 67 aa1.13□□□□□ -2.23
LRCH3-211ENST00000466054 DEFB125Q8N687 156 aa1.13□□□□□ -2.23
LRCH3-211ENST00000466054 OR1M1Q8NGA1 313 aa1.13□□□□□ -2.23
LRCH3-211ENST00000466054 TESCQ96BS2 214 aa1.13□□□□□ -2.23
LRCH3-211ENST00000466054 CUL9Q8IWT3 2517 aa1.13□□□□□ -2.23
LRCH3-211ENST00000466054 FREM1Q5H8C1 2179 aa1.13□□□□□ -2.23
LRCH3-211ENST00000466054 KMT2BQ9UMN6 2715 aaPredicted RBP1.12□□□□□ -2.23
LRCH3-211ENST00000466054 A0A1B0GV50 99 aa1.12□□□□□ -2.23
LRCH3-211ENST00000466054 SLC22A1O15245 554 aa1.12□□□□□ -2.23
LRCH3-211ENST00000466054 NOS1APO75052 506 aaPredicted RBP1.12□□□□□ -2.23
LRCH3-211ENST00000466054 SULT1A3P0DMM9 295 aa1.12□□□□□ -2.23
LRCH3-211ENST00000466054 SULT1A4P0DMN0 295 aa1.12□□□□□ -2.23
LRCH3-211ENST00000466054 MAP2K4P45985 399 aa1.12□□□□□ -2.23
LRCH3-211ENST00000466054 FXYD2P54710 66 aa1.12□□□□□ -2.23
LRCH3-211ENST00000466054 NAA20P61599 178 aa1.12□□□□□ -2.23
LRCH3-211ENST00000466054 GLT8D1Q68CQ7 371 aa1.12□□□□□ -2.23
LRCH3-211ENST00000466054 FAM173BQ6P4H8 233 aa1.12□□□□□ -2.23
LRCH3-211ENST00000466054 ZNF676Q8N7Q3 588 aa1.12□□□□□ -2.23
LRCH3-211ENST00000466054 C9orf163Q8N9P6 203 aa1.12□□□□□ -2.23
LRCH3-211ENST00000466054 OR8B3Q8NGG8 313 aa1.12□□□□□ -2.23
LRCH3-211ENST00000466054 RAB8BQ92930 207 aa1.12□□□□□ -2.23
LRCH3-211ENST00000466054 LLPHQ9BRT6 129 aaKnown RBP1.12□□□□□ -2.23
LRCH3-211ENST00000466054 ADAT1Q9BUB4 502 aaKnown RBP1.12□□□□□ -2.23
LRCH3-211ENST00000466054 FAM96AQ9H5X1 160 aa1.12□□□□□ -2.23
LRCH3-211ENST00000466054 DCCP43146 1447 aa1.12□□□□□ -2.23
LRCH3-211ENST00000466054 IBA57-AS1B1ANH7 110 aa1.11□□□□□ -2.23
LRCH3-211ENST00000466054 C21orf140B9A014 251 aa1.11□□□□□ -2.23
LRCH3-211ENST00000466054 TRAPPC2LH3BP13 241 aa1.11□□□□□ -2.23
LRCH3-211ENST00000466054 ACOX3O15254 700 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms