RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 KTN1-AS1Q86SY8 53 aa1.5□□□□□ -2.17
CLK1-208ENST00000464454 C10orf126Q8N4M7 172 aa1.5□□□□□ -2.17
CLK1-208ENST00000464454 ROPN1LQ96C74 230 aa1.5□□□□□ -2.17
CLK1-208ENST00000464454 ZNF625Q96I27 306 aaPredicted RBP1.5□□□□□ -2.17
CLK1-208ENST00000464454 PRAP1Q96NZ9 151 aa1.5□□□□□ -2.17
CLK1-208ENST00000464454 DOHHQ9BU89 302 aa1.5□□□□□ -2.17
CLK1-208ENST00000464454 OR51I1Q9H343 314 aa1.5□□□□□ -2.17
CLK1-208ENST00000464454 XPNPEP1Q9NQW7 623 aa1.5□□□□□ -2.17
CLK1-208ENST00000464454 ANGPT4Q9Y264 503 aa1.5□□□□□ -2.17
CLK1-208ENST00000464454 PTPRBP23467 1997 aa1.5□□□□□ -2.17
CLK1-208ENST00000464454 DISP1Q96F81 1524 aa1.5□□□□□ -2.17
CLK1-208ENST00000464454 MALRD1Q5VYJ5 2156 aa1.49□□□□□ -2.17
CLK1-208ENST00000464454 MUC6Q6W4X9 2439 aa1.49□□□□□ -2.17
CLK1-208ENST00000464454 TRAV38-1A0A0B4J264 116 aa1.49□□□□□ -2.17
CLK1-208ENST00000464454 A0A1B0GV50 99 aa1.49□□□□□ -2.17
CLK1-208ENST00000464454 A8MUN3 132 aa1.49□□□□□ -2.17
CLK1-208ENST00000464454 TGOLN2O43493 480 aa1.49□□□□□ -2.17
CLK1-208ENST00000464454 PGLYRP1O75594 196 aaPredicted RBP1.49□□□□□ -2.17
CLK1-208ENST00000464454 NSA2O95478 260 aaKnown RBP1.49□□□□□ -2.17
CLK1-208ENST00000464454 TCL1AP56279 114 aa1.49□□□□□ -2.17
CLK1-208ENST00000464454 RAB5BP61020 215 aa1.49□□□□□ -2.17
CLK1-208ENST00000464454 RAB14P61106 215 aa1.49□□□□□ -2.17
CLK1-208ENST00000464454 ERVS71-1P61550 626 aa1.49□□□□□ -2.17
CLK1-208ENST00000464454 POLR2GP62487 172 aaKnown RBP eCLIP1.49□□□□□ -2.17
CLK1-208ENST00000464454 HIST1H4AP62805 103 aaKnown RBP1.49□□□□□ -2.17
CLK1-208ENST00000464454 C9orf64Q5T6V5 341 aa1.49□□□□□ -2.17
CLK1-208ENST00000464454 LPCAT4Q643R3 524 aa1.49□□□□□ -2.17
CLK1-208ENST00000464454 CHMP6Q96FZ7 201 aa1.49□□□□□ -2.17
CLK1-208ENST00000464454 CCDC94Q9BW85 323 aaPredicted RBP1.49□□□□□ -2.17
CLK1-208ENST00000464454 VCX3BQ9H321 246 aa1.49□□□□□ -2.17
CLK1-208ENST00000464454 C8orf4Q9NR00 106 aa1.49□□□□□ -2.17
CLK1-208ENST00000464454 DOK5Q9P104 306 aa1.49□□□□□ -2.17
CLK1-208ENST00000464454 RSL24D1Q9UHA3 163 aaKnown RBP1.49□□□□□ -2.17
CLK1-208ENST00000464454 LSM5Q9Y4Y9 91 aaKnown RBP1.49□□□□□ -2.17
CLK1-208ENST00000464454 RGS12O14924 1447 aa1.49□□□□□ -2.17
CLK1-208ENST00000464454 ADGRL3Q9HAR2 1447 aa1.49□□□□□ -2.17
CLK1-208ENST00000464454 FLT4P35916 1363 aa1.48□□□□□ -2.17
CLK1-208ENST00000464454 OTOGLQ3ZCN5 2332 aa1.48□□□□□ -2.17
CLK1-208ENST00000464454 TRAV7A0A075B6U4 112 aa1.48□□□□□ -2.17
CLK1-208ENST00000464454 HMSDA8MTL9 139 aa1.48□□□□□ -2.17
CLK1-208ENST00000464454 H3BT86 120 aa1.48□□□□□ -2.17
CLK1-208ENST00000464454 H7C2G1 150 aa1.48□□□□□ -2.17
CLK1-208ENST00000464454 KCNK1O00180 336 aa1.48□□□□□ -2.17
CLK1-208ENST00000464454 SULT1B1O43704 296 aa1.48□□□□□ -2.17
CLK1-208ENST00000464454 RPP14O95059 124 aaKnown RBP1.48□□□□□ -2.17
CLK1-208ENST00000464454 IFNA5P01569 189 aa1.48□□□□□ -2.17
CLK1-208ENST00000464454 FAM228BP0C875 321 aa1.48□□□□□ -2.17
CLK1-208ENST00000464454 KCNE1P15382 129 aa1.48□□□□□ -2.17
CLK1-208ENST00000464454 CDKN2CP42773 168 aa1.48□□□□□ -2.17
CLK1-208ENST00000464454 RPL28P46779 137 aaKnown RBP1.48□□□□□ -2.17
CLK1-208ENST00000464454 CSN1S1P47710 185 aa1.48□□□□□ -2.17
CLK1-208ENST00000464454 NKX2-5P52952 324 aaPredicted RBP1.48□□□□□ -2.17
CLK1-208ENST00000464454 OR4D2P58180 307 aa1.48□□□□□ -2.17
CLK1-208ENST00000464454 B2MP61769 119 aa1.48□□□□□ -2.17
CLK1-208ENST00000464454 CCL7P80098 99 aa1.48□□□□□ -2.17
CLK1-208ENST00000464454 SFXN4Q6P4A7 337 aa1.48□□□□□ -2.17
CLK1-208ENST00000464454 Q6ZRN7 208 aaPredicted RBP1.48□□□□□ -2.17
CLK1-208ENST00000464454 C9orf16Q9BUW7 83 aa1.48□□□□□ -2.17
CLK1-208ENST00000464454 CRCT1Q9UGL9 99 aa1.48□□□□□ -2.17
CLK1-208ENST00000464454 GUCA1BQ9UMX6 200 aa1.48□□□□□ -2.17
CLK1-208ENST00000464454 RTTNQ86VV8 2226 aa1.48□□□□□ -2.17
CLK1-208ENST00000464454 COL4A1P02462 1669 aa1.48□□□□□ -2.17
CLK1-208ENST00000464454 DCCP43146 1447 aa1.48□□□□□ -2.17
CLK1-208ENST00000464454 CPAMD8Q8IZJ3 1885 aa1.48□□□□□ -2.17
CLK1-208ENST00000464454 GREB1Q4ZG55 1949 aa1.47□□□□□ -2.17
CLK1-208ENST00000464454 IGHV1-18A0A0C4DH31 117 aa1.47□□□□□ -2.17
CLK1-208ENST00000464454 SMIM23A6NLE4 172 aa1.47□□□□□ -2.17
CLK1-208ENST00000464454 I3L521 148 aa1.47□□□□□ -2.17
CLK1-208ENST00000464454 LEPROTO15243 131 aa1.47□□□□□ -2.17
CLK1-208ENST00000464454 NAPSAO96009 420 aa1.47□□□□□ -2.17
CLK1-208ENST00000464454 C1QCP02747 245 aa1.47□□□□□ -2.17
CLK1-208ENST00000464454 SERPINA7P05543 415 aa1.47□□□□□ -2.17
CLK1-208ENST00000464454 MSMBP08118 114 aa1.47□□□□□ -2.17
CLK1-208ENST00000464454 SRP19P09132 144 aaKnown RBP1.47□□□□□ -2.17
CLK1-208ENST00000464454 TFPTP0C1Z6 253 aa1.47□□□□□ -2.17
CLK1-208ENST00000464454 CCL5P13501 91 aa1.47□□□□□ -2.17
CLK1-208ENST00000464454 MSNP26038 577 aaKnown RBP1.47□□□□□ -2.17
CLK1-208ENST00000464454 S100A7P31151 101 aa1.47□□□□□ -2.17
CLK1-208ENST00000464454 ITGB3BPQ13352 177 aaPredicted RBP1.47□□□□□ -2.17
CLK1-208ENST00000464454 ACSM3Q53FZ2 586 aa1.47□□□□□ -2.17
CLK1-208ENST00000464454 FAM201AQ5SY85 155 aa1.47□□□□□ -2.17
CLK1-208ENST00000464454 GLT8D1Q68CQ7 371 aa1.47□□□□□ -2.17
CLK1-208ENST00000464454 COA5Q86WW8 74 aa1.47□□□□□ -2.17
CLK1-208ENST00000464454 DYNAPQ8N1N2 210 aa1.47□□□□□ -2.17
CLK1-208ENST00000464454 ZNF563Q8TA94 476 aa1.47□□□□□ -2.17
CLK1-208ENST00000464454 CNBD2Q96M20 576 aa1.47□□□□□ -2.17
CLK1-208ENST00000464454 NAT8Q9UHE5 227 aa1.47□□□□□ -2.17
CLK1-208ENST00000464454 SLC22A13Q9Y226 551 aa1.47□□□□□ -2.17
CLK1-208ENST00000464454 AMMECR1Q9Y4X0 333 aaPredicted RBP1.47□□□□□ -2.17
CLK1-208ENST00000464454 SNAPC4Q5SXM2 1469 aa1.47□□□□□ -2.17
CLK1-208ENST00000464454 TRGV2A0A075B6R0 118 aa1.46□□□□□ -2.18
CLK1-208ENST00000464454 MEIKINA0A087WXM9 373 aa1.46□□□□□ -2.18
CLK1-208ENST00000464454 M0R036 132 aa1.46□□□□□ -2.18
CLK1-208ENST00000464454 ATP5HO75947 161 aa1.46□□□□□ -2.18
CLK1-208ENST00000464454 PPBPP02775 128 aa1.46□□□□□ -2.18
CLK1-208ENST00000464454 OR5G3P0C626 314 aa1.46□□□□□ -2.18
CLK1-208ENST00000464454 CAPZBP47756 277 aa1.46□□□□□ -2.18
CLK1-208ENST00000464454 ARF6P62330 175 aa1.46□□□□□ -2.18
CLK1-208ENST00000464454 HIST3H3Q16695 136 aa1.46□□□□□ -2.18
CLK1-208ENST00000464454 KRTAP21-3Q3LHN1 58 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms