RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 CENPSQ8N2Z9 138 aa13.29□□□□□ -0.28
VPS52-215ENST00000464425 DUX3Q96PT4 197 aa13.29□□□□□ -0.28
VPS52-215ENST00000464425 OR2A7Q96R45 310 aa13.29□□□□□ -0.28
VPS52-215ENST00000464425 TMEM222Q9H0R3 208 aa13.29□□□□□ -0.28
VPS52-215ENST00000464425 PALMDQ9NP74 551 aa13.29□□□□□ -0.28
VPS52-215ENST00000464425 FOXA2Q9Y261 457 aaPredicted RBP13.29□□□□□ -0.28
VPS52-215ENST00000464425 NOTCH1P46531 2555 aa13.29□□□□□ -0.28
VPS52-215ENST00000464425 FAM240BA0A1B0GVZ2 78 aa13.28□□□□□ -0.28
VPS52-215ENST00000464425 G3V4G9 280 aa13.28□□□□□ -0.28
VPS52-215ENST00000464425 SOX15O60248 233 aa13.28□□□□□ -0.28
VPS52-215ENST00000464425 S1PR2O95136 353 aa13.28□□□□□ -0.28
VPS52-215ENST00000464425 CDS2O95674 445 aa13.28□□□□□ -0.28
VPS52-215ENST00000464425 IL6RP08887 468 aaPredicted RBP13.28□□□□□ -0.28
VPS52-215ENST00000464425 FGF2P09038 288 aa13.28□□□□□ -0.28
VPS52-215ENST00000464425 SAA1P0DJI8 122 aaPredicted RBP13.28□□□□□ -0.28
VPS52-215ENST00000464425 CD33P20138 364 aa13.28□□□□□ -0.28
VPS52-215ENST00000464425 CDX1P47902 265 aaPredicted RBP13.28□□□□□ -0.28
VPS52-215ENST00000464425 RAB9AP51151 201 aa13.28□□□□□ -0.28
VPS52-215ENST00000464425 PRSS8Q16651 343 aa13.28□□□□□ -0.28
VPS52-215ENST00000464425 DEFB136Q30KP8 78 aa13.28□□□□□ -0.28
VPS52-215ENST00000464425 AKIRIN2Q53H80 203 aa13.28□□□□□ -0.28
VPS52-215ENST00000464425 ETV3LQ6ZN32 361 aa13.28□□□□□ -0.28
VPS52-215ENST00000464425 TMED4Q7Z7H5 227 aa13.28□□□□□ -0.28
VPS52-215ENST00000464425 OR4A5Q8NH83 315 aa13.28□□□□□ -0.28
VPS52-215ENST00000464425 GLYATL2Q8WU03 294 aa13.28□□□□□ -0.28
VPS52-215ENST00000464425 BET1LQ9NYM9 111 aa13.28□□□□□ -0.28
VPS52-215ENST00000464425 TNCP24821 2201 aa13.28□□□□□ -0.28
VPS52-215ENST00000464425 MARCH11A6NNE9 402 aa13.27□□□□□ -0.29
VPS52-215ENST00000464425 CREBL2O60519 120 aaPredicted RBP13.27□□□□□ -0.29
VPS52-215ENST00000464425 ATG12O94817 140 aa13.27□□□□□ -0.29
VPS52-215ENST00000464425 OR5AC1P0C628 307 aa13.27□□□□□ -0.29
VPS52-215ENST00000464425 SUPT4H1P63272 117 aaKnown RBP13.27□□□□□ -0.29
VPS52-215ENST00000464425 DEFA6Q01524 100 aa13.27□□□□□ -0.29
VPS52-215ENST00000464425 KIAA0141Q14154 515 aaPredicted RBP13.27□□□□□ -0.29
VPS52-215ENST00000464425 TNXAQ16473 311 aa13.27□□□□□ -0.29
VPS52-215ENST00000464425 SP6Q3SY56 376 aa13.27□□□□□ -0.29
VPS52-215ENST00000464425 OXLD1Q5BKU9 147 aa13.27□□□□□ -0.29
VPS52-215ENST00000464425 MRPL41Q8IXM3 137 aaKnown RBP13.27□□□□□ -0.29
VPS52-215ENST00000464425 DUSP18Q8NEJ0 188 aa13.27□□□□□ -0.29
VPS52-215ENST00000464425 WFDC9Q8NEX5 89 aa13.27□□□□□ -0.29
VPS52-215ENST00000464425 OR5T1Q8NG75 326 aa13.27□□□□□ -0.29
VPS52-215ENST00000464425 TMEM167AQ8TBQ9 72 aa13.27□□□□□ -0.29
VPS52-215ENST00000464425 MS4A10Q96PG2 267 aa13.27□□□□□ -0.29
VPS52-215ENST00000464425 OR5B12Q96R08 314 aa13.27□□□□□ -0.29
VPS52-215ENST00000464425 ALX4Q9H161 411 aaPredicted RBP13.27□□□□□ -0.29
VPS52-215ENST00000464425 ZNF430Q9H8G1 570 aaPredicted RBP13.27□□□□□ -0.29
VPS52-215ENST00000464425 FLVCR2Q9UPI3 526 aa13.27□□□□□ -0.29
VPS52-215ENST00000464425 PIGBOS1A0A0B4J2F0 54 aa13.26□□□□□ -0.29
VPS52-215ENST00000464425 CCL24O00175 119 aa13.26□□□□□ -0.29
VPS52-215ENST00000464425 KBTBD11O94819 623 aa13.26□□□□□ -0.29
VPS52-215ENST00000464425 KRASP01116 189 aa13.26□□□□□ -0.29
VPS52-215ENST00000464425 IGKV1-39P01597 117 aa13.26□□□□□ -0.29
VPS52-215ENST00000464425 IGKV1D-39P04432 117 aa13.26□□□□□ -0.29
VPS52-215ENST00000464425 APELAP0DMC3 54 aa13.26□□□□□ -0.29
VPS52-215ENST00000464425 ANXA3P12429 323 aa13.26□□□□□ -0.29
VPS52-215ENST00000464425 IGLL1P15814 213 aa13.26□□□□□ -0.29
VPS52-215ENST00000464425 MYCNOSP40205 109 aa13.26□□□□□ -0.29
VPS52-215ENST00000464425 ERVK-16P61578 105 aa13.26□□□□□ -0.29
VPS52-215ENST00000464425 TMEM187Q14656 261 aa13.26□□□□□ -0.29
VPS52-215ENST00000464425 OR4A47Q6IF82 309 aa13.26□□□□□ -0.29
VPS52-215ENST00000464425 SSX9Q7RTT3 188 aa13.26□□□□□ -0.29
VPS52-215ENST00000464425 MMD2Q8IY49 270 aa13.26□□□□□ -0.29
VPS52-215ENST00000464425 ZNF491Q8N8L2 437 aa13.26□□□□□ -0.29
VPS52-215ENST00000464425 DMBX1Q8NFW5 382 aa13.26□□□□□ -0.29
VPS52-215ENST00000464425 MYOZ3Q8TDC0 251 aa13.26□□□□□ -0.29
VPS52-215ENST00000464425 RAX2Q96IS3 184 aa13.26□□□□□ -0.29
VPS52-215ENST00000464425 SEC22AQ96IW7 307 aa13.26□□□□□ -0.29
VPS52-215ENST00000464425 TMEM56Q96MV1 263 aa13.26□□□□□ -0.29
VPS52-215ENST00000464425 C20orf85Q9H1P6 137 aa13.26□□□□□ -0.29
VPS52-215ENST00000464425 GNB4Q9HAV0 340 aa13.26□□□□□ -0.29
VPS52-215ENST00000464425 TMEM56-RWDD3S4R434 201 aa13.26□□□□□ -0.29
VPS52-215ENST00000464425 MSGN1A6NI15 193 aa13.25□□□□□ -0.29
VPS52-215ENST00000464425 G6PCP35575 357 aa13.25□□□□□ -0.29
VPS52-215ENST00000464425 MECP2P51608 486 aaKnown RBP13.25□□□□□ -0.29
VPS52-215ENST00000464425 RAB25P57735 213 aa13.25□□□□□ -0.29
VPS52-215ENST00000464425 TRIM16LQ309B1 348 aa13.25□□□□□ -0.29
VPS52-215ENST00000464425 SAMD5Q5TGI4 173 aa13.25□□□□□ -0.29
VPS52-215ENST00000464425 LINC00482Q8N8I6 264 aa13.25□□□□□ -0.29
VPS52-215ENST00000464425 OR5M8Q8NGP6 311 aa13.25□□□□□ -0.29
VPS52-215ENST00000464425 ENKURQ8TC29 256 aa13.25□□□□□ -0.29
VPS52-215ENST00000464425 C4orf3Q8WVX3 66 aa13.25□□□□□ -0.29
VPS52-215ENST00000464425 IL22RA2Q969J5 263 aa13.25□□□□□ -0.29
VPS52-215ENST00000464425 UBE2E2Q96LR5 201 aa13.25□□□□□ -0.29
VPS52-215ENST00000464425 PHB2Q99623 299 aa13.25□□□□□ -0.29
VPS52-215ENST00000464425 ZNF355PQ9NSJ1 428 aa13.25□□□□□ -0.29
VPS52-215ENST00000464425 TMEM140Q9NV12 185 aa13.25□□□□□ -0.29
VPS52-215ENST00000464425 NUDT15Q9NV35 164 aa13.25□□□□□ -0.29
VPS52-215ENST00000464425 ACTL6BO94805 426 aa13.24□□□□□ -0.29
VPS52-215ENST00000464425 SFT2D2O95562 160 aa13.24□□□□□ -0.29
VPS52-215ENST00000464425 MAS1LP35410 378 aa13.24□□□□□ -0.29
VPS52-215ENST00000464425 SRPXP78539 464 aa13.24□□□□□ -0.29
VPS52-215ENST00000464425 PPP1R1AQ13522 171 aa13.24□□□□□ -0.29
VPS52-215ENST00000464425 ASPHD1Q5U4P2 390 aa13.24□□□□□ -0.29
VPS52-215ENST00000464425 NRARPQ7Z6K4 114 aa13.24□□□□□ -0.29
VPS52-215ENST00000464425 RBPMSQ93062 196 aaKnown RBP13.24□□□□□ -0.29
VPS52-215ENST00000464425 P2RX4Q99571 388 aa13.24□□□□□ -0.29
VPS52-215ENST00000464425 MEGF8Q7Z7M0 2845 aa13.23□□□□□ -0.29
VPS52-215ENST00000464425 UPK2O00526 184 aa13.23□□□□□ -0.29
VPS52-215ENST00000464425 H2AFB2P0C5Z0 115 aa13.23□□□□□ -0.29
VPS52-215ENST00000464425 OR4E1P0C645 316 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms