RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 FFAR4Q5NUL3 377 aa8.25□□□□□ -1.09
MSH5-211ENST00000463144 TREML4Q6UXN2 200 aa8.25□□□□□ -1.09
MSH5-211ENST00000463144 OSR1Q8TAX0 266 aaPredicted RBP8.25□□□□□ -1.09
MSH5-211ENST00000463144 TMEM186Q96B77 213 aa8.25□□□□□ -1.09
MSH5-211ENST00000463144 RAB39BQ96DA2 213 aa8.25□□□□□ -1.09
MSH5-211ENST00000463144 C20orf24Q9BUV8 137 aa8.25□□□□□ -1.09
MSH5-211ENST00000463144 MAP1LC3BQ9GZQ8 125 aa8.25□□□□□ -1.09
MSH5-211ENST00000463144 ZNF257Q9Y2Q1 563 aa8.25□□□□□ -1.09
MSH5-211ENST00000463144 TNCP24821 2201 aa8.25□□□□□ -1.09
MSH5-211ENST00000463144 HMGB3O15347 200 aaKnown RBP8.24□□□□□ -1.09
MSH5-211ENST00000463144 CA2P00918 260 aa8.24□□□□□ -1.09
MSH5-211ENST00000463144 APOA2P02652 100 aa8.24□□□□□ -1.09
MSH5-211ENST00000463144 HSPB1P04792 205 aaKnown RBP8.24□□□□□ -1.09
MSH5-211ENST00000463144 DEFA4P12838 97 aa8.24□□□□□ -1.09
MSH5-211ENST00000463144 AKIRIN2Q53H80 203 aa8.24□□□□□ -1.09
MSH5-211ENST00000463144 KHDC3LQ587J8 217 aa8.24□□□□□ -1.09
MSH5-211ENST00000463144 SOHLH1Q5JUK2 328 aa8.24□□□□□ -1.09
MSH5-211ENST00000463144 FAM71F2Q6NXP2 309 aa8.24□□□□□ -1.09
MSH5-211ENST00000463144 CYB561D1Q8N8Q1 229 aa8.24□□□□□ -1.09
MSH5-211ENST00000463144 OR10G4Q8NGN3 311 aa8.24□□□□□ -1.09
MSH5-211ENST00000463144 OR10G9Q8NGN4 311 aa8.24□□□□□ -1.09
MSH5-211ENST00000463144 OR10G7Q8NGN6 311 aa8.24□□□□□ -1.09
MSH5-211ENST00000463144 LHX4Q969G2 390 aa8.24□□□□□ -1.09
MSH5-211ENST00000463144 HARBI1Q96MB7 349 aa8.24□□□□□ -1.09
MSH5-211ENST00000463144 GGACTQ9BVM4 153 aa8.24□□□□□ -1.09
MSH5-211ENST00000463144 HINT2Q9BX68 163 aa8.24□□□□□ -1.09
MSH5-211ENST00000463144 RAB1BQ9H0U4 201 aa8.24□□□□□ -1.09
MSH5-211ENST00000463144 SLC39A9Q9NUM3 307 aa8.24□□□□□ -1.09
MSH5-211ENST00000463144 MALRD1Q5VYJ5 2156 aa8.24□□□□□ -1.09
MSH5-211ENST00000463144 C7orf77A4D0Y5 90 aa8.24□□□□□ -1.09
MSH5-211ENST00000463144 ZFP92A6NM28 416 aa8.24□□□□□ -1.09
MSH5-211ENST00000463144 IFNA4P05014 189 aa8.24□□□□□ -1.09
MSH5-211ENST00000463144 GNLYP22749 145 aa8.24□□□□□ -1.09
MSH5-211ENST00000463144 NPY1RP25929 384 aa8.24□□□□□ -1.09
MSH5-211ENST00000463144 PRCDQ00LT1 54 aa8.24□□□□□ -1.09
MSH5-211ENST00000463144 ARSJQ5FYB0 599 aaPredicted RBP8.24□□□□□ -1.09
MSH5-211ENST00000463144 WDR25Q64LD2 544 aaPredicted RBP8.24□□□□□ -1.09
MSH5-211ENST00000463144 SLC24A4Q8NFF2 622 aa8.24□□□□□ -1.09
MSH5-211ENST00000463144 ITLN2Q8WWU7 325 aaPredicted RBP8.24□□□□□ -1.09
MSH5-211ENST00000463144 FLYWCH2Q96CP2 140 aaKnown RBP8.24□□□□□ -1.09
MSH5-211ENST00000463144 RITA1Q96K30 269 aa8.24□□□□□ -1.09
MSH5-211ENST00000463144 TMPRSS5Q9H3S3 457 aa8.24□□□□□ -1.09
MSH5-211ENST00000463144 SLC25A22Q9H936 323 aa8.24□□□□□ -1.09
MSH5-211ENST00000463144 SMCO3A2RU48 225 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 E7EUB6 86 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 IGLV1-47P01700 117 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 IGLV2-23P01705 113 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 SNRNP70P08621 437 aaKnown RBP8.23□□□□□ -1.09
MSH5-211ENST00000463144 BCL2P10415 239 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 RAB11AP62491 216 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 DLK1P80370 383 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 GCSAMLQ5JQS6 135 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 FAM122CQ6P4D5 195 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 ZNF709Q8N972 641 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 OR10W1Q8NGF6 305 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 C17orf50Q8WW18 174 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 MGST2Q99735 147 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 RPS10P5Q9NQ39 176 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 USP24Q9UPU5 2620 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 IGHV2-26A0A0B4J1V2 119 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 PPIAL4CA0A0B4J2A2 164 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 CTXND1A0A1B0GTU2 59 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 C17orf112F2Z3M2 114 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 MBP02144 154 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 PPIAL4GP0DN37 164 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 CEBPGP53567 150 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 PMS2P11Q13670 270 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 C4orf17Q53FE4 359 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 PDPNQ86YL7 162 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 TGIF2LXQ8IUE1 241 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 OR4C13Q8NGP0 309 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 C8orf46Q8TAG6 207 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 RAB24Q969Q5 203 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 PLEKHA3Q9HB20 300 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 ENY2Q9NPA8 101 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 LSM4Q9Y4Z0 139 aaKnown RBP8.23□□□□□ -1.09
MSH5-211ENST00000463144 PUS1Q9Y606 427 aaKnown RBP eCLIP8.23□□□□□ -1.09
MSH5-211ENST00000463144 TACC2O95359 2948 aa8.23□□□□□ -1.09
MSH5-211ENST00000463144 ACACBO00763 2458 aa8.22□□□□□ -1.09
MSH5-211ENST00000463144 IGHV3-72A0A0B4J1Y9 119 aa8.22□□□□□ -1.09
MSH5-211ENST00000463144 CGB1A6NKQ9 187 aa8.22□□□□□ -1.09
MSH5-211ENST00000463144 COLCA2A8K830 154 aa8.22□□□□□ -1.09
MSH5-211ENST00000463144 H3BQ15 152 aa8.22□□□□□ -1.09
MSH5-211ENST00000463144 C19orf84I3L1E1 186 aa8.22□□□□□ -1.09
MSH5-211ENST00000463144 M0R036 132 aa8.22□□□□□ -1.09
MSH5-211ENST00000463144 YIF1AO95070 293 aa8.22□□□□□ -1.09
MSH5-211ENST00000463144 MRGPRG-AS1Q2M3A8 158 aa8.22□□□□□ -1.09
MSH5-211ENST00000463144 BSXQ3C1V8 233 aa8.22□□□□□ -1.09
MSH5-211ENST00000463144 DTX2Q86UW9 622 aa8.22□□□□□ -1.09
MSH5-211ENST00000463144 LY6G5BQ8NDX9 201 aa8.22□□□□□ -1.09
MSH5-211ENST00000463144 NEIL1Q96FI4 390 aaPredicted RBP8.22□□□□□ -1.09
MSH5-211ENST00000463144 PCGF1Q9BSM1 259 aa8.22□□□□□ -1.09
MSH5-211ENST00000463144 GGTLC1Q9BX51 225 aa8.22□□□□□ -1.09
MSH5-211ENST00000463144 NPVFQ9HCQ7 196 aa8.22□□□□□ -1.09
MSH5-211ENST00000463144 NDUFA4L2Q9NRX3 87 aa8.22□□□□□ -1.09
MSH5-211ENST00000463144 MIOXQ9UGB7 285 aa8.22□□□□□ -1.09
MSH5-211ENST00000463144 WASHC3Q9Y3C0 194 aa8.22□□□□□ -1.09
MSH5-211ENST00000463144 TPRP12270 2363 aaKnown RBP8.22□□□□□ -1.09
MSH5-211ENST00000463144 C22orf46C9J442 243 aa8.22□□□□□ -1.09
MSH5-211ENST00000463144 MPDU1O75352 247 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms