RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 M0R1X1 148 aa5.9□□□□□ -1.46
UBE4B-204ENST00000462658 RAB29O14966 203 aa5.9□□□□□ -1.46
UBE4B-204ENST00000462658 RBP4P02753 201 aa5.9□□□□□ -1.46
UBE4B-204ENST00000462658 SERPINE2P07093 398 aa5.9□□□□□ -1.46
UBE4B-204ENST00000462658 DNASE1P24855 282 aa5.9□□□□□ -1.46
UBE4B-204ENST00000462658 NKX2-5P52952 324 aaPredicted RBP5.9□□□□□ -1.46
UBE4B-204ENST00000462658 RPL30P62888 115 aaKnown RBP5.9□□□□□ -1.46
UBE4B-204ENST00000462658 CYCSP99999 105 aaKnown RBP5.9□□□□□ -1.46
UBE4B-204ENST00000462658 CATR1Q13166 79 aa5.9□□□□□ -1.46
UBE4B-204ENST00000462658 IZUMO4Q1ZYL8 232 aa5.9□□□□□ -1.46
UBE4B-204ENST00000462658 RPL39P5Q59GN2 51 aa5.9□□□□□ -1.46
UBE4B-204ENST00000462658 Q5BKY6 102 aa5.9□□□□□ -1.46
UBE4B-204ENST00000462658 LYG1Q8N1E2 194 aa5.9□□□□□ -1.46
UBE4B-204ENST00000462658 ABHD12Q8N2K0 398 aa5.9□□□□□ -1.46
UBE4B-204ENST00000462658 C8orf31Q8N9H6 132 aa5.9□□□□□ -1.46
UBE4B-204ENST00000462658 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.9□□□□□ -1.46
UBE4B-204ENST00000462658 LHFPL5Q8TAF8 219 aa5.9□□□□□ -1.46
UBE4B-204ENST00000462658 TCTEX1D2Q8WW35 142 aa5.9□□□□□ -1.46
UBE4B-204ENST00000462658 IL22RA2Q969J5 263 aa5.9□□□□□ -1.46
UBE4B-204ENST00000462658 C2orf50Q96LR7 162 aa5.9□□□□□ -1.46
UBE4B-204ENST00000462658 TMEM68Q96MH6 324 aa5.9□□□□□ -1.46
UBE4B-204ENST00000462658 HSD17B10Q99714 261 aaKnown RBP5.9□□□□□ -1.46
UBE4B-204ENST00000462658 TMEM133Q9H2Q1 129 aa5.9□□□□□ -1.46
UBE4B-204ENST00000462658 C1RLQ9NZP8 487 aa5.9□□□□□ -1.46
UBE4B-204ENST00000462658 ONECUT1Q9UBC0 465 aa5.9□□□□□ -1.46
UBE4B-204ENST00000462658 ZNF580Q9UK33 172 aa5.9□□□□□ -1.46
UBE4B-204ENST00000462658 TMED3Q9Y3Q3 217 aa5.9□□□□□ -1.46
UBE4B-204ENST00000462658 SESN1Q9Y6P5 492 aa5.9□□□□□ -1.46
UBE4B-204ENST00000462658 ANKRD17O75179 2603 aaKnown RBP5.9□□□□□ -1.47
UBE4B-204ENST00000462658 SAA2-SAA4A0A096LPE2 208 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 PIGBOS1A0A0B4J2F0 54 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 DUXBA0A1W2PPF3 345 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 MPTX1A8MV57 137 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 J3QR06 171 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 M0R1W7 72 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 TOR1AO14656 332 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 GAGE7O76087 117 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 GAGE12FP0CL80 117 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 GAGE12GP0CL81 117 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 GAGE12IP0CL82 117 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 SAA2P0DJI9 122 aaPredicted RBP5.89□□□□□ -1.47
UBE4B-204ENST00000462658 DUTP33316 252 aaKnown RBP5.89□□□□□ -1.47
UBE4B-204ENST00000462658 LPAR6P43657 344 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 PRRX1P54821 245 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 ARF6P62330 175 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 LCN2P80188 198 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 FGL1Q08830 312 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 GAGE1Q13065 139 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 GAGE4Q13068 117 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 IAH1Q2TAA2 248 aaPredicted RBP5.89□□□□□ -1.47
UBE4B-204ENST00000462658 NCR3LG1Q68D85 454 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 ODF3L1Q8IXM7 274 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 SPAG16Q8N0X2 631 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 LINC00311Q8N616 119 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 TCTEX1D1Q8N7M0 179 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 Q8N7P7 452 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 SLC35G3Q8N808 338 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 OR11H4Q8NGC9 324 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 OR10X1Q8NGY0 326 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 OR9G1Q8NH87 305 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 ZNF596Q8TC21 504 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 RBPMSQ93062 196 aaKnown RBP5.89□□□□□ -1.47
UBE4B-204ENST00000462658 RRNAD1Q96FB5 475 aaKnown RBP5.89□□□□□ -1.47
UBE4B-204ENST00000462658 GRAMD2BQ96HH9 432 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 OR10C1Q96KK4 312 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 HYLS1Q96M11 299 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 S1PR3Q99500 378 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 ZNF251Q9BRH9 671 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 PCGF1Q9BSM1 259 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 NMES1Q9C002 83 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 FAM212BQ9NTI7 297 aaPredicted RBP5.89□□□□□ -1.47
UBE4B-204ENST00000462658 COMMD9Q9P000 198 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 GSKIPQ9P0R6 139 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 ZNRD1Q9P1U0 126 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 PRELID3BQ9Y3B1 194 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 PRRC2AP48634 2157 aaKnown RBP5.89□□□□□ -1.47
UBE4B-204ENST00000462658 MALRD1Q5VYJ5 2156 aa5.89□□□□□ -1.47
UBE4B-204ENST00000462658 IGHV4-30-2A0A087WSY4 118 aa5.88□□□□□ -1.47
UBE4B-204ENST00000462658 IGHV2-26A0A0B4J1V2 119 aa5.88□□□□□ -1.47
UBE4B-204ENST00000462658 IGHV4-61A0A0C4DH41 118 aa5.88□□□□□ -1.47
UBE4B-204ENST00000462658 A8MXK9 166 aa5.88□□□□□ -1.47
UBE4B-204ENST00000462658 G3V3Q6 166 aa5.88□□□□□ -1.47
UBE4B-204ENST00000462658 ENSAO43768 121 aaKnown RBP5.88□□□□□ -1.47
UBE4B-204ENST00000462658 FOXH1O75593 365 aa5.88□□□□□ -1.47
UBE4B-204ENST00000462658 IGKV1-39P01597 117 aa5.88□□□□□ -1.47
UBE4B-204ENST00000462658 IGKV1D-39P04432 117 aa5.88□□□□□ -1.47
UBE4B-204ENST00000462658 RPA2P15927 270 aa5.88□□□□□ -1.47
UBE4B-204ENST00000462658 VDAC1P21796 283 aa5.88□□□□□ -1.47
UBE4B-204ENST00000462658 PSMB6P28072 239 aa5.88□□□□□ -1.47
UBE4B-204ENST00000462658 ARL3P36405 182 aa5.88□□□□□ -1.47
UBE4B-204ENST00000462658 ZNF816Q0VGE8 651 aaPredicted RBP5.88□□□□□ -1.47
UBE4B-204ENST00000462658 IL15RAQ13261 267 aa5.88□□□□□ -1.47
UBE4B-204ENST00000462658 CLEC12BQ2HXU8 276 aa5.88□□□□□ -1.47
UBE4B-204ENST00000462658 OR2B11Q5JQS5 317 aa5.88□□□□□ -1.47
UBE4B-204ENST00000462658 KIR3DL3Q8N743 410 aa5.88□□□□□ -1.47
UBE4B-204ENST00000462658 ZBTB8BQ8NAP8 495 aaPredicted RBP5.88□□□□□ -1.47
UBE4B-204ENST00000462658 OR13D1Q8NGV5 346 aa5.88□□□□□ -1.47
UBE4B-204ENST00000462658 CD300LFQ8TDQ1 290 aa5.88□□□□□ -1.47
UBE4B-204ENST00000462658 PPP1R1CQ8WVI7 109 aa5.88□□□□□ -1.47
UBE4B-204ENST00000462658 C17orf50Q8WW18 174 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms