RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 RHBDL2Q9NX52 303 aa11.56□□□□□ -0.56
SKA3-204ENST00000462482 BET1LQ9NYM9 111 aa11.56□□□□□ -0.56
SKA3-204ENST00000462482 SACSQ9NZJ4 4579 aa11.55□□□□□ -0.56
SKA3-204ENST00000462482 TMEM213A2RRL7 107 aa11.55□□□□□ -0.56
SKA3-204ENST00000462482 E7EUB6 86 aa11.55□□□□□ -0.56
SKA3-204ENST00000462482 RBFOX2O43251 390 aaKnown RBP eCLIP11.55□□□□□ -0.56
SKA3-204ENST00000462482 MYOD1P15172 320 aa11.55□□□□□ -0.56
SKA3-204ENST00000462482 EDN2P20800 178 aa11.55□□□□□ -0.56
SKA3-204ENST00000462482 EIF4EBP1Q13541 118 aaPredicted RBP11.55□□□□□ -0.56
SKA3-204ENST00000462482 TIMM50Q3ZCQ8 353 aa11.55□□□□□ -0.56
SKA3-204ENST00000462482 UBE2UQ5VVX9 321 aa11.55□□□□□ -0.56
SKA3-204ENST00000462482 SFXN4Q6P4A7 337 aa11.55□□□□□ -0.56
SKA3-204ENST00000462482 PLET1Q6UQ28 207 aa11.55□□□□□ -0.56
SKA3-204ENST00000462482 BTNL8Q6UX41 500 aa11.55□□□□□ -0.56
SKA3-204ENST00000462482 OR1L6Q8NGR2 347 aa11.55□□□□□ -0.56
SKA3-204ENST00000462482 OR13F1Q8NGS4 319 aa11.55□□□□□ -0.56
SKA3-204ENST00000462482 BORCS5Q969J3 196 aa11.55□□□□□ -0.56
SKA3-204ENST00000462482 SLC5A7Q9GZV3 580 aa11.55□□□□□ -0.56
SKA3-204ENST00000462482 CCL28Q9NRJ3 127 aa11.55□□□□□ -0.56
SKA3-204ENST00000462482 MRPL27Q9P0M9 148 aaKnown RBP11.55□□□□□ -0.56
SKA3-204ENST00000462482 MLXQ9UH92 298 aa11.55□□□□□ -0.56
SKA3-204ENST00000462482 RAB26Q9ULW5 256 aa11.55□□□□□ -0.56
SKA3-204ENST00000462482 SELENOKQ9Y6D0 94 aa11.55□□□□□ -0.56
SKA3-204ENST00000462482 IGLV11-55A0A075B6I3 123 aa11.54□□□□□ -0.56
SKA3-204ENST00000462482 TRAV18A0A075B6X5 111 aa11.54□□□□□ -0.56
SKA3-204ENST00000462482 SSX5O60225 188 aa11.54□□□□□ -0.56
SKA3-204ENST00000462482 HPRT1P00492 218 aa11.54□□□□□ -0.56
SKA3-204ENST00000462482 NQO2P16083 231 aa11.54□□□□□ -0.56
SKA3-204ENST00000462482 GPR183P32249 361 aa11.54□□□□□ -0.56
SKA3-204ENST00000462482 ELLP55199 621 aaPredicted RBP11.54□□□□□ -0.56
SKA3-204ENST00000462482 SCAND1P57086 179 aa11.54□□□□□ -0.56
SKA3-204ENST00000462482 TAS2R31P59538 309 aa11.54□□□□□ -0.56
SKA3-204ENST00000462482 ZNF585BQ52M93 769 aa11.54□□□□□ -0.56
SKA3-204ENST00000462482 TM4SF20Q53R12 229 aa11.54□□□□□ -0.56
SKA3-204ENST00000462482 DMBX1Q8NFW5 382 aa11.54□□□□□ -0.56
SKA3-204ENST00000462482 CD300LFQ8TDQ1 290 aa11.54□□□□□ -0.56
SKA3-204ENST00000462482 SRSF8Q9BRL6 282 aaKnown RBP11.54□□□□□ -0.56
SKA3-204ENST00000462482 DIABLOQ9NR28 239 aa11.54□□□□□ -0.56
SKA3-204ENST00000462482 ETV7Q9Y603 341 aa11.54□□□□□ -0.56
SKA3-204ENST00000462482 A0A1B0GW64 132 aa11.53□□□□□ -0.56
SKA3-204ENST00000462482 CXorf65A6NEN9 183 aa11.53□□□□□ -0.56
SKA3-204ENST00000462482 MFSD2BA6NFX1 497 aa11.53□□□□□ -0.56
SKA3-204ENST00000462482 SULT1C2O00338 296 aa11.53□□□□□ -0.56
SKA3-204ENST00000462482 PPYP01298 95 aa11.53□□□□□ -0.56
SKA3-204ENST00000462482 APOC4P55056 127 aa11.53□□□□□ -0.56
SKA3-204ENST00000462482 BRWD1-AS2P59051 145 aa11.53□□□□□ -0.56
SKA3-204ENST00000462482 FXYD4P59646 89 aa11.53□□□□□ -0.56
SKA3-204ENST00000462482 ERVK-16P61578 105 aa11.53□□□□□ -0.56
SKA3-204ENST00000462482 KLK9Q2XQG4 91 aa11.53□□□□□ -0.56
SKA3-204ENST00000462482 THOC7Q6I9Y2 204 aaKnown RBP11.53□□□□□ -0.56
SKA3-204ENST00000462482 LAMTOR1Q6IAA8 161 aa11.53□□□□□ -0.56
SKA3-204ENST00000462482 GPHA2Q96T91 129 aa11.53□□□□□ -0.56
SKA3-204ENST00000462482 KLK9Q9UKQ9 250 aa11.53□□□□□ -0.56
SKA3-204ENST00000462482 DNAH1Q9P2D7 4330 aa11.52□□□□□ -0.57
SKA3-204ENST00000462482 A0A0A6YYH2 397 aa11.52□□□□□ -0.57
SKA3-204ENST00000462482 A6NJ64 397 aa11.52□□□□□ -0.57
SKA3-204ENST00000462482 UPK2O00526 184 aa11.52□□□□□ -0.57
SKA3-204ENST00000462482 PTBP1P26599 531 aaKnown RBP eCLIP11.52□□□□□ -0.57
SKA3-204ENST00000462482 CBX5P45973 191 aa11.52□□□□□ -0.57
SKA3-204ENST00000462482 OR2B8PP59922 312 aa11.52□□□□□ -0.57
SKA3-204ENST00000462482 HERV-K104P61576 105 aa11.52□□□□□ -0.57
SKA3-204ENST00000462482 AADACL3Q5VUY0 350 aa11.52□□□□□ -0.57
SKA3-204ENST00000462482 HSD17B13Q7Z5P4 300 aaPredicted RBP11.52□□□□□ -0.57
SKA3-204ENST00000462482 HOGA1Q86XE5 327 aa11.52□□□□□ -0.57
SKA3-204ENST00000462482 SPARTQ8N0X7 666 aa11.52□□□□□ -0.57
SKA3-204ENST00000462482 OR2C3Q8N628 320 aa11.52□□□□□ -0.57
SKA3-204ENST00000462482 ZNF502Q8TBZ5 544 aa11.52□□□□□ -0.57
SKA3-204ENST00000462482 SPAG8Q99932 426 aaPredicted RBP11.52□□□□□ -0.57
SKA3-204ENST00000462482 OVOL2Q9BRP0 275 aa11.52□□□□□ -0.57
SKA3-204ENST00000462482 QTRT1Q9BXR0 403 aaKnown RBP11.52□□□□□ -0.57
SKA3-204ENST00000462482 Q9H521 79 aa11.52□□□□□ -0.57
SKA3-204ENST00000462482 C8orf88P0DMB2 117 aa11.51□□□□□ -0.57
SKA3-204ENST00000462482 SDC2P34741 201 aa11.51□□□□□ -0.57
SKA3-204ENST00000462482 MXD1Q05195 221 aa11.51□□□□□ -0.57
SKA3-204ENST00000462482 IDNKQ5T6J7 187 aa11.51□□□□□ -0.57
SKA3-204ENST00000462482 TMEM17Q86X19 198 aa11.51□□□□□ -0.57
SKA3-204ENST00000462482 GVQW1Q8N7I0 195 aa11.51□□□□□ -0.57
SKA3-204ENST00000462482 OR51H1Q8NH63 302 aa11.51□□□□□ -0.57
SKA3-204ENST00000462482 VN1R17PQ8TDU5 208 aa11.51□□□□□ -0.57
SKA3-204ENST00000462482 C5orf66Q9H5L9 145 aa11.51□□□□□ -0.57
SKA3-204ENST00000462482 PLEKHA2Q9HB19 425 aa11.51□□□□□ -0.57
SKA3-204ENST00000462482 TMEM140Q9NV12 185 aa11.51□□□□□ -0.57
SKA3-204ENST00000462482 IGHV3-35A0A0C4DH35 117 aa11.5□□□□□ -0.57
SKA3-204ENST00000462482 IGLC7A0M8Q6 106 aa11.5□□□□□ -0.57
SKA3-204ENST00000462482 NUPR2A6NF83 97 aa11.5□□□□□ -0.57
SKA3-204ENST00000462482 TGOLN2O43493 480 aa11.5□□□□□ -0.57
SKA3-204ENST00000462482 FGF2P09038 288 aa11.5□□□□□ -0.57
SKA3-204ENST00000462482 TRAPPC2P0DI81 140 aa11.5□□□□□ -0.57
SKA3-204ENST00000462482 TRAPPC2BP0DI82 140 aa11.5□□□□□ -0.57
SKA3-204ENST00000462482 BMI1P35226 326 aa11.5□□□□□ -0.57
SKA3-204ENST00000462482 PMS2P11Q13670 270 aa11.5□□□□□ -0.57
SKA3-204ENST00000462482 POU2AF1Q16633 256 aa11.5□□□□□ -0.57
SKA3-204ENST00000462482 SLC25A24Q6NUK1 477 aa11.5□□□□□ -0.57
SKA3-204ENST00000462482 UNQ9165/PRO28630Q6UXU0 137 aa11.5□□□□□ -0.57
SKA3-204ENST00000462482 GDPD1Q8N9F7 314 aa11.5□□□□□ -0.57
SKA3-204ENST00000462482 TSPAN14Q8NG11 270 aa11.5□□□□□ -0.57
SKA3-204ENST00000462482 GIMAP1Q8WWP7 306 aa11.5□□□□□ -0.57
SKA3-204ENST00000462482 IFT46Q9NQC8 304 aa11.5□□□□□ -0.57
SKA3-204ENST00000462482 COMMD9Q9P000 198 aa11.5□□□□□ -0.57
SKA3-204ENST00000462482 TP53TG1Q9Y2A0 90 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms