RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 SLC25A46Q96AG3 418 aa14.37□□□□□ -0.11
VARS-220ENST00000461874 TM2D3Q9BRN9 247 aa14.37□□□□□ -0.11
VARS-220ENST00000461874 PLEKHA2Q9HB19 425 aa14.37□□□□□ -0.11
VARS-220ENST00000461874 TRAV3A0A0B4J244 114 aa14.36□□□□□ -0.11
VARS-220ENST00000461874 UPK2O00526 184 aa14.36□□□□□ -0.11
VARS-220ENST00000461874 PMP2P02689 132 aa14.36□□□□□ -0.11
VARS-220ENST00000461874 HIST1H1BP16401 226 aaKnown RBP14.36□□□□□ -0.11
VARS-220ENST00000461874 GTSCR1Q86UQ5 136 aa14.36□□□□□ -0.11
VARS-220ENST00000461874 MOB3AQ96BX8 217 aa14.36□□□□□ -0.11
VARS-220ENST00000461874 ZNF2Q9BSG1 426 aaPredicted RBP14.36□□□□□ -0.11
VARS-220ENST00000461874 RYR3Q15413 4870 aa14.36□□□□□ -0.11
VARS-220ENST00000461874 S1PR2O95136 353 aa14.35□□□□□ -0.11
VARS-220ENST00000461874 OR2C1O95371 312 aa14.35□□□□□ -0.11
VARS-220ENST00000461874 IGHV3-23P01764 117 aa14.35□□□□□ -0.11
VARS-220ENST00000461874 HLA-AP01891 365 aaKnown RBP14.35□□□□□ -0.11
VARS-220ENST00000461874 REG1AP05451 166 aa14.35□□□□□ -0.11
VARS-220ENST00000461874 FGF2P09038 288 aa14.35□□□□□ -0.11
VARS-220ENST00000461874 PRSS3P35030 304 aa14.35□□□□□ -0.11
VARS-220ENST00000461874 TAS2R46P59540 309 aa14.35□□□□□ -0.11
VARS-220ENST00000461874 OR5H2Q8NGV7 314 aa14.35□□□□□ -0.11
VARS-220ENST00000461874 CCDC140Q96MF4 163 aa14.35□□□□□ -0.11
VARS-220ENST00000461874 TMEM140Q9NV12 185 aa14.35□□□□□ -0.11
VARS-220ENST00000461874 IGLV11-55A0A075B6I3 123 aa14.34□□□□□ -0.11
VARS-220ENST00000461874 IGLC7A0M8Q6 106 aa14.34□□□□□ -0.11
VARS-220ENST00000461874 LGALS9O00182 355 aa14.34□□□□□ -0.11
VARS-220ENST00000461874 PGLYRP1O75594 196 aaPredicted RBP14.34□□□□□ -0.11
VARS-220ENST00000461874 EIF4EP06730 217 aaKnown RBP14.34□□□□□ -0.11
VARS-220ENST00000461874 DEFA4P12838 97 aa14.34□□□□□ -0.11
VARS-220ENST00000461874 NCS1P62166 190 aa14.34□□□□□ -0.11
VARS-220ENST00000461874 CD300EQ496F6 205 aaPredicted RBP14.34□□□□□ -0.11
VARS-220ENST00000461874 CLEC19AQ6UXS0 136 aa14.34□□□□□ -0.11
VARS-220ENST00000461874 GPHB5Q86YW7 130 aa14.34□□□□□ -0.11
VARS-220ENST00000461874 LYSMD2Q8IV50 215 aa14.34□□□□□ -0.11
VARS-220ENST00000461874 DMBX1Q8NFW5 382 aa14.34□□□□□ -0.11
VARS-220ENST00000461874 MUC7Q8TAX7 377 aa14.34□□□□□ -0.11
VARS-220ENST00000461874 EEF1AKMT3Q96AZ1 226 aa14.34□□□□□ -0.11
VARS-220ENST00000461874 SRSF8Q9BRL6 282 aaKnown RBP14.34□□□□□ -0.11
VARS-220ENST00000461874 FUNDC2Q9BWH2 189 aa14.34□□□□□ -0.11
VARS-220ENST00000461874 COMMD5Q9GZQ3 224 aa14.34□□□□□ -0.11
VARS-220ENST00000461874 COMMD9Q9P000 198 aa14.34□□□□□ -0.11
VARS-220ENST00000461874 S4R3C0 116 aa14.34□□□□□ -0.11
VARS-220ENST00000461874 C2orf70A6NJV1 201 aa14.33□□□□□ -0.12
VARS-220ENST00000461874 FOLR2P14207 255 aa14.33□□□□□ -0.12
VARS-220ENST00000461874 F2RP25116 425 aa14.33□□□□□ -0.12
VARS-220ENST00000461874 ARL3P36405 182 aa14.33□□□□□ -0.12
VARS-220ENST00000461874 DEFB114Q30KQ6 69 aa14.33□□□□□ -0.12
VARS-220ENST00000461874 GPX8Q8TED1 209 aa14.33□□□□□ -0.12
VARS-220ENST00000461874 CMTM3Q96MX0 182 aa14.33□□□□□ -0.12
VARS-220ENST00000461874 TUBA4BQ9H853 241 aa14.33□□□□□ -0.12
VARS-220ENST00000461874 COMMD3Q9UBI1 195 aa14.33□□□□□ -0.12
VARS-220ENST00000461874 ZNF785A8K8V0 405 aa14.32□□□□□ -0.12
VARS-220ENST00000461874 APOA1P02647 267 aa14.32□□□□□ -0.12
VARS-220ENST00000461874 RLN1P04808 185 aa14.32□□□□□ -0.12
VARS-220ENST00000461874 RPA2P15927 270 aa14.32□□□□□ -0.12
VARS-220ENST00000461874 EDN2P20800 178 aa14.32□□□□□ -0.12
VARS-220ENST00000461874 HRH1P35367 487 aa14.32□□□□□ -0.12
VARS-220ENST00000461874 VBP1P61758 197 aa14.32□□□□□ -0.12
VARS-220ENST00000461874 HAGHQ16775 308 aa14.32□□□□□ -0.12
VARS-220ENST00000461874 LAX1Q8IWV1 398 aa14.32□□□□□ -0.12
VARS-220ENST00000461874 OR6F1Q8NGZ6 308 aa14.32□□□□□ -0.12
VARS-220ENST00000461874 DYNLRB2Q8TF09 96 aa14.32□□□□□ -0.12
VARS-220ENST00000461874 QTRT1Q9BXR0 403 aaKnown RBP14.32□□□□□ -0.12
VARS-220ENST00000461874 FXYD6Q9H0Q3 95 aa14.32□□□□□ -0.12
VARS-220ENST00000461874 TRBV7-1A0A0A6YYK4 115 aa14.31□□□□□ -0.12
VARS-220ENST00000461874 SMIM31A0A1B0GVY4 71 aa14.31□□□□□ -0.12
VARS-220ENST00000461874 MFSD2BA6NFX1 497 aa14.31□□□□□ -0.12
VARS-220ENST00000461874 MARCH11A6NNE9 402 aa14.31□□□□□ -0.12
VARS-220ENST00000461874 CLEC3BP05452 202 aa14.31□□□□□ -0.12
VARS-220ENST00000461874 HLA-DMAP28067 261 aa14.31□□□□□ -0.12
VARS-220ENST00000461874 ERVK-16P61578 105 aa14.31□□□□□ -0.12
VARS-220ENST00000461874 FAM106AQ4KMX7 169 aa14.31□□□□□ -0.12
VARS-220ENST00000461874 CMTM1Q8IZ96 169 aa14.31□□□□□ -0.12
VARS-220ENST00000461874 FCAMRQ8WWV6 532 aa14.31□□□□□ -0.12
VARS-220ENST00000461874 DGCR14Q96DF8 476 aaKnown RBP14.31□□□□□ -0.12
VARS-220ENST00000461874 CXorf58Q96LI9 332 aa14.31□□□□□ -0.12
VARS-220ENST00000461874 CITED4Q96RK1 184 aa14.31□□□□□ -0.12
VARS-220ENST00000461874 TECRQ9NZ01 308 aaKnown RBP14.31□□□□□ -0.12
VARS-220ENST00000461874 GPR31O00270 319 aa14.3□□□□□ -0.12
VARS-220ENST00000461874 LPAR6P43657 344 aa14.3□□□□□ -0.12
VARS-220ENST00000461874 CD81P60033 236 aa14.3□□□□□ -0.12
VARS-220ENST00000461874 ZNF585BQ52M93 769 aa14.3□□□□□ -0.12
VARS-220ENST00000461874 CASC10Q5T4H9 136 aa14.3□□□□□ -0.12
VARS-220ENST00000461874 THOC7Q6I9Y2 204 aaKnown RBP14.3□□□□□ -0.12
VARS-220ENST00000461874 CADM3Q8N126 398 aa14.3□□□□□ -0.12
VARS-220ENST00000461874 OR10W1Q8NGF6 305 aa14.3□□□□□ -0.12
VARS-220ENST00000461874 SCPEP1Q9HB40 452 aa14.3□□□□□ -0.12
VARS-220ENST00000461874 ZC4H2Q9NQZ6 224 aa14.3□□□□□ -0.12
VARS-220ENST00000461874 TEX50A0A1B0GTY4 177 aa14.29□□□□□ -0.12
VARS-220ENST00000461874 ZNF320A2RRD8 509 aa14.29□□□□□ -0.12
VARS-220ENST00000461874 TRAPPC2P0DI81 140 aa14.29□□□□□ -0.12
VARS-220ENST00000461874 TRAPPC2BP0DI82 140 aa14.29□□□□□ -0.12
VARS-220ENST00000461874 CBLN1P23435 193 aa14.29□□□□□ -0.12
VARS-220ENST00000461874 SNX29P2Q8IUI4 249 aa14.29□□□□□ -0.12
VARS-220ENST00000461874 OR1L8Q8NGR8 309 aa14.29□□□□□ -0.12
VARS-220ENST00000461874 ZNF502Q8TBZ5 544 aa14.29□□□□□ -0.12
VARS-220ENST00000461874 NEURL2Q9BR09 285 aa14.29□□□□□ -0.12
VARS-220ENST00000461874 SPATA25Q9BR10 227 aa14.29□□□□□ -0.12
VARS-220ENST00000461874 SLC2A8Q9NY64 477 aa14.29□□□□□ -0.12
VARS-220ENST00000461874 THYN1Q9P016 225 aa14.29□□□□□ -0.12
VARS-220ENST00000461874 TMEM213A2RRL7 107 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms