RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 CHRDL1Q9BU40 450 aa12.12□□□□□ -0.47
NCL-207ENST00000461347 PRNDQ9UKY0 176 aa12.12□□□□□ -0.47
NCL-207ENST00000461347 APCSP02743 223 aa12.11□□□□□ -0.47
NCL-207ENST00000461347 GFRA1P56159 465 aa12.11□□□□□ -0.47
NCL-207ENST00000461347 CENPWQ5EE01 88 aa12.11□□□□□ -0.47
NCL-207ENST00000461347 COL5A1-AS1Q5SY13 56 aa12.11□□□□□ -0.47
NCL-207ENST00000461347 OR2V2Q96R30 315 aa12.11□□□□□ -0.47
NCL-207ENST00000461347 PPIHO43447 177 aaKnown RBP12.11□□□□□ -0.47
NCL-207ENST00000461347 IL6RP08887 468 aaPredicted RBP12.11□□□□□ -0.47
NCL-207ENST00000461347 HSPE1P61604 102 aaKnown RBP12.11□□□□□ -0.47
NCL-207ENST00000461347 Q5PR19 223 aa12.11□□□□□ -0.47
NCL-207ENST00000461347 ACP7Q6ZNF0 438 aa12.11□□□□□ -0.47
NCL-207ENST00000461347 ZCCHC14Q8WYQ9 949 aaKnown RBP12.11□□□□□ -0.47
NCL-207ENST00000461347 SPTAN1Q13813 2472 aaKnown RBP12.11□□□□□ -0.47
NCL-207ENST00000461347 A6NNC1 897 aa12.11□□□□□ -0.47
NCL-207ENST00000461347 SERF1AO75920 110 aa12.11□□□□□ -0.47
NCL-207ENST00000461347 IGHV3-48P01763 117 aa12.11□□□□□ -0.47
NCL-207ENST00000461347 APELAP0DMC3 54 aa12.11□□□□□ -0.47
NCL-207ENST00000461347 ADMP35318 185 aa12.11□□□□□ -0.47
NCL-207ENST00000461347 C11orf42Q8N5U0 333 aa12.11□□□□□ -0.47
NCL-207ENST00000461347 SSBP3Q9BWW4 388 aaPredicted RBP12.11□□□□□ -0.47
NCL-207ENST00000461347 MED13LQ71F56 2210 aa12.11□□□□□ -0.47
NCL-207ENST00000461347 IGKV3D-15A0A087WSY6 115 aa12.11□□□□□ -0.47
NCL-207ENST00000461347 CNIH1O95406 144 aa12.11□□□□□ -0.47
NCL-207ENST00000461347 IGKV1-39P01597 117 aa12.11□□□□□ -0.47
NCL-207ENST00000461347 IGKV1D-39P04432 117 aa12.11□□□□□ -0.47
NCL-207ENST00000461347 COX19Q49B96 90 aa12.11□□□□□ -0.47
NCL-207ENST00000461347 SPATA45Q537H7 98 aa12.11□□□□□ -0.47
NCL-207ENST00000461347 LINC01551Q86U37 167 aa12.11□□□□□ -0.47
NCL-207ENST00000461347 OCC1Q8TAD7 63 aa12.11□□□□□ -0.47
NCL-207ENST00000461347 CALYQ9NYX4 217 aa12.11□□□□□ -0.47
NCL-207ENST00000461347 CHD7Q9P2D1 2997 aa12.1□□□□□ -0.47
NCL-207ENST00000461347 SIAH2O43255 324 aa12.1□□□□□ -0.47
NCL-207ENST00000461347 CSN3P07498 182 aa12.1□□□□□ -0.47
NCL-207ENST00000461347 PFN1P07737 140 aaKnown RBP12.1□□□□□ -0.47
NCL-207ENST00000461347 ZFP36L1Q07352 338 aaKnown RBP12.1□□□□□ -0.47
NCL-207ENST00000461347 SGK494Q96LW2 274 aa12.1□□□□□ -0.47
NCL-207ENST00000461347 NABP2Q9BQ15 211 aa12.1□□□□□ -0.47
NCL-207ENST00000461347 BET1LQ9NYM9 111 aa12.1□□□□□ -0.47
NCL-207ENST00000461347 CD82P27701 267 aa12.1□□□□□ -0.47
NCL-207ENST00000461347 OR4C5Q8NGB2 326 aa12.1□□□□□ -0.47
NCL-207ENST00000461347 WDR83OSQ9Y284 106 aa12.1□□□□□ -0.47
NCL-207ENST00000461347 A0A1B0GUS0 222 aa12.1□□□□□ -0.47
NCL-207ENST00000461347 IGKV1D-33P01593 117 aa12.1□□□□□ -0.47
NCL-207ENST00000461347 IGKV1-33P01594 117 aa12.1□□□□□ -0.47
NCL-207ENST00000461347 MT-ND6P03923 174 aa12.1□□□□□ -0.47
NCL-207ENST00000461347 GATA2P23769 480 aaPredicted RBP12.1□□□□□ -0.47
NCL-207ENST00000461347 FAM53AQ6NSI3 398 aaPredicted RBP12.1□□□□□ -0.47
NCL-207ENST00000461347 BHLHA15Q7RTS1 189 aaPredicted RBP12.1□□□□□ -0.47
NCL-207ENST00000461347 PRDM13Q9H4Q3 707 aa12.1□□□□□ -0.47
NCL-207ENST00000461347 MUC22E2RYF6 1773 aaPredicted RBP12.09□□□□□ -0.47
NCL-207ENST00000461347 hADV38S2A0JD32 116 aa12.09□□□□□ -0.47
NCL-207ENST00000461347 IGFBP2P18065 325 aa12.09□□□□□ -0.47
NCL-207ENST00000461347 COLCA1Q6ZS62 124 aa12.09□□□□□ -0.47
NCL-207ENST00000461347 ITLN1Q8WWA0 313 aa12.09□□□□□ -0.47
NCL-207ENST00000461347 CA2P00918 260 aa12.09□□□□□ -0.47
NCL-207ENST00000461347 OR9G9P0C7N8 305 aa12.09□□□□□ -0.47
NCL-207ENST00000461347 FAM201AQ5SY85 155 aa12.09□□□□□ -0.47
NCL-207ENST00000461347 OR1B1Q8NGR6 318 aa12.09□□□□□ -0.47
NCL-207ENST00000461347 CCL13Q99616 98 aa12.09□□□□□ -0.47
NCL-207ENST00000461347 IL36BQ9NZH7 164 aa12.09□□□□□ -0.47
NCL-207ENST00000461347 MRPS18CQ9Y3D5 142 aaKnown RBP12.09□□□□□ -0.47
NCL-207ENST00000461347 TTC28Q96AY4 2481 aa12.09□□□□□ -0.47
NCL-207ENST00000461347 HINT1P49773 126 aaPredicted RBP12.09□□□□□ -0.47
NCL-207ENST00000461347 OR4B1Q8NGF8 309 aa12.09□□□□□ -0.47
NCL-207ENST00000461347 LINC00869P0C866 280 aa12.08□□□□□ -0.48
NCL-207ENST00000461347 CHRNB4P30926 498 aa12.08□□□□□ -0.48
NCL-207ENST00000461347 Q6P435 159 aa12.08□□□□□ -0.48
NCL-207ENST00000461347 HAPLN4Q86UW8 402 aa12.08□□□□□ -0.48
NCL-207ENST00000461347 CCL17Q92583 94 aa12.08□□□□□ -0.48
NCL-207ENST00000461347 TMEM106BQ9NUM4 274 aa12.08□□□□□ -0.48
NCL-207ENST00000461347 PLCE1Q9P212 2302 aa12.08□□□□□ -0.48
NCL-207ENST00000461347 ABCA4P78363 2273 aa12.08□□□□□ -0.48
NCL-207ENST00000461347 ZNF137PP52743 207 aa12.08□□□□□ -0.48
NCL-207ENST00000461347 PDPNQ86YL7 162 aa12.08□□□□□ -0.48
NCL-207ENST00000461347 GBGT1Q8N5D6 347 aa12.08□□□□□ -0.48
NCL-207ENST00000461347 JPT1Q9UK76 154 aa12.08□□□□□ -0.48
NCL-207ENST00000461347 IGHV3-21A0A0B4J1V1 117 aa12.08□□□□□ -0.48
NCL-207ENST00000461347 GNB2P62879 340 aa12.08□□□□□ -0.48
NCL-207ENST00000461347 VMA21Q3ZAQ7 101 aa12.08□□□□□ -0.48
NCL-207ENST00000461347 WNT10AQ9GZT5 417 aa12.08□□□□□ -0.48
NCL-207ENST00000461347 RNF7Q9UBF6 113 aa12.08□□□□□ -0.48
NCL-207ENST00000461347 IGHV1-2P23083 117 aa12.07□□□□□ -0.48
NCL-207ENST00000461347 TMEM105Q8N8V8 129 aa12.07□□□□□ -0.48
NCL-207ENST00000461347 OR1L4Q8NGR5 311 aa12.07□□□□□ -0.48
NCL-207ENST00000461347 ZNF503-AS2A6NEH8 195 aa12.07□□□□□ -0.48
NCL-207ENST00000461347 NTN3O00634 580 aaPredicted RBP12.07□□□□□ -0.48
NCL-207ENST00000461347 IL18BPO95998 194 aa12.07□□□□□ -0.48
NCL-207ENST00000461347 HLA-DQA1P01909 254 aa12.07□□□□□ -0.48
NCL-207ENST00000461347 TNFSF10P50591 281 aa12.07□□□□□ -0.48
NCL-207ENST00000461347 TEX38Q6PEX7 206 aa12.07□□□□□ -0.48
NCL-207ENST00000461347 MIR17HGQ75NE6 70 aa12.07□□□□□ -0.48
NCL-207ENST00000461347 RNF138Q8WVD3 245 aa12.07□□□□□ -0.48
NCL-207ENST00000461347 PRDM6Q9NQX0 595 aa12.07□□□□□ -0.48
NCL-207ENST00000461347 TBL2Q9Y4P3 447 aaKnown RBP12.07□□□□□ -0.48
NCL-207ENST00000461347 ADAMTS9Q9P2N4 1935 aa12.07□□□□□ -0.48
NCL-207ENST00000461347 SERTM2A0A1B0GWG4 89 aa12.07□□□□□ -0.48
NCL-207ENST00000461347 CECR9P0C854 216 aa12.07□□□□□ -0.48
NCL-207ENST00000461347 HOXA4Q00056 320 aaPredicted RBP12.07□□□□□ -0.48
NCL-207ENST00000461347 FOXF2Q12947 444 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms