RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 PRNDQ9UKY0 176 aa4.73□□□□□ -1.65
NUP98-208ENST00000461047 TBC1D24Q9ULP9 559 aa4.73□□□□□ -1.65
NUP98-208ENST00000461047 VSIG4Q9Y279 399 aa4.73□□□□□ -1.65
NUP98-208ENST00000461047 MED13LQ71F56 2210 aa4.73□□□□□ -1.65
NUP98-208ENST00000461047 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.73□□□□□ -1.654e-6■■■■□ 21.6
NUP98-208ENST00000461047 YLPM1P49750 1951 aaKnown RBP4.73□□□□□ -1.65
NUP98-208ENST00000461047 CSPG4Q6UVK1 2322 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 FLNAP21333 2647 aaKnown RBP4.72□□□□□ -1.65
NUP98-208ENST00000461047 A0A0B4J2A0 478 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 C9orf170A2RU37 121 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 MARCH11A6NNE9 402 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 SNRPGP15A8MWD9 76 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 AP4M1O00189 453 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 SSNA1O43805 119 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 SLC25A17O43808 307 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 RAMP3O60896 148 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 KBTBD11O94819 623 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 SCAF4O95104 1147 aaKnown RBP4.72□□□□□ -1.65
NUP98-208ENST00000461047 S1PR2O95136 353 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 NDUFA3O95167 84 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 SFT2D2O95562 160 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 LY86O95711 162 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 HLA-DRB1P01911 266 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 IGKV1-16P04430 117 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 FGF2P09038 288 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 GYPEP15421 78 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 ANXA7P20073 488 aaKnown RBP4.72□□□□□ -1.65
NUP98-208ENST00000461047 VDAC1P21796 283 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 F2RL1P55085 397 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 RIPPLY3P57055 190 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 GNB1P62873 340 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 RPL8P62917 257 aaKnown RBP4.72□□□□□ -1.65
NUP98-208ENST00000461047 IFITM3Q01628 133 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 PPP1R1AQ13522 171 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 EIF4EBP1Q13541 118 aaPredicted RBP4.72□□□□□ -1.65
NUP98-208ENST00000461047 POU2AF1Q16633 256 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 TMEM268Q5VZI3 342 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 OR4A47Q6IF82 309 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 CCBE1Q6UXH8 406 aaPredicted RBP4.72□□□□□ -1.65
NUP98-208ENST00000461047 ZNF562Q6V9R5 426 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 SSX9Q7RTT3 188 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 HSD17B13Q7Z5P4 300 aaPredicted RBP4.72□□□□□ -1.65
NUP98-208ENST00000461047 SLC35E3Q7Z769 313 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 Q8N6K4 173 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 C5orf56Q8N8D9 126 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 UXS1Q8NBZ7 420 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 TMEM167AQ8TBQ9 72 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 ZNF431Q8TF32 576 aaPredicted RBP4.72□□□□□ -1.65
NUP98-208ENST00000461047 GLYATL2Q8WU03 294 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 LSM10Q969L4 123 aaKnown RBP4.72□□□□□ -1.65
NUP98-208ENST00000461047 TMEM56Q96MV1 263 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 DUX5Q96PT3 197 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 TP53RKQ96S44 253 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 MARVELD1Q9BSK0 173 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 FBXL15Q9H469 300 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 ENY2Q9NPA8 101 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.72□□□□□ -1.65
NUP98-208ENST00000461047 SHPKQ9UHJ6 478 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 SIGLEC9Q9Y336 463 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 TMED3Q9Y3Q3 217 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 MMP24Q9Y5R2 645 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 DMRT1Q9Y5R6 373 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 TMEM56-RWDD3S4R434 201 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 KIAA2026Q5HYC2 2103 aa4.72□□□□□ -1.65
NUP98-208ENST00000461047 A0A1B0GU03 582 aa4.71□□□□□ -1.66
NUP98-208ENST00000461047 UPK2O00526 184 aa4.71□□□□□ -1.66
NUP98-208ENST00000461047 MED6O75586 246 aa4.71□□□□□ -1.66
NUP98-208ENST00000461047 TSPAN9O75954 239 aa4.71□□□□□ -1.66
NUP98-208ENST00000461047 NDUFA7O95182 113 aa4.71□□□□□ -1.66
NUP98-208ENST00000461047 SAA1P0DJI8 122 aaPredicted RBP4.71□□□□□ -1.66
NUP98-208ENST00000461047 SULT1A3P0DMM9 295 aa4.71□□□□□ -1.66
NUP98-208ENST00000461047 SULT1A4P0DMN0 295 aa4.71□□□□□ -1.66
NUP98-208ENST00000461047 HLA-GP17693 338 aa4.71□□□□□ -1.66
NUP98-208ENST00000461047 BTCP35070 178 aa4.71□□□□□ -1.66
NUP98-208ENST00000461047 G6PCP35575 357 aa4.71□□□□□ -1.66
NUP98-208ENST00000461047 VDAC2P45880 294 aaPredicted RBP4.71□□□□□ -1.66
NUP98-208ENST00000461047 COMPP49747 757 aaPredicted RBP4.71□□□□□ -1.66
NUP98-208ENST00000461047 LINC00205P59089 165 aa4.71□□□□□ -1.66
NUP98-208ENST00000461047 CYCSP99999 105 aaKnown RBP4.71□□□□□ -1.66
NUP98-208ENST00000461047 CD69Q07108 199 aa4.71□□□□□ -1.66
NUP98-208ENST00000461047 DHRS2Q13268 280 aa4.71□□□□□ -1.66
NUP98-208ENST00000461047 TMEM187Q14656 261 aa4.71□□□□□ -1.66
NUP98-208ENST00000461047 FXYD3Q14802 87 aa4.71□□□□□ -1.66
NUP98-208ENST00000461047 TNXAQ16473 311 aa4.71□□□□□ -1.66
NUP98-208ENST00000461047 PRSS8Q16651 343 aa4.71□□□□□ -1.66
NUP98-208ENST00000461047 ZNF585BQ52M93 769 aa4.71□□□□□ -1.66
NUP98-208ENST00000461047 TMEM65Q6PI78 240 aa4.71□□□□□ -1.66
NUP98-208ENST00000461047 CENPVQ7Z7K6 275 aaPredicted RBP4.71□□□□□ -1.66
NUP98-208ENST00000461047 LURAP1LQ8IV03 231 aa4.71□□□□□ -1.66
NUP98-208ENST00000461047 SELENOHQ8IZQ5 122 aaKnown RBP4.71□□□□□ -1.66
NUP98-208ENST00000461047 C12orf45Q8N5I9 185 aaPredicted RBP4.71□□□□□ -1.66
NUP98-208ENST00000461047 FAM71E2Q8N5Q1 922 aa4.71□□□□□ -1.66
NUP98-208ENST00000461047 COMMD1Q8N668 190 aa4.71□□□□□ -1.66
NUP98-208ENST00000461047 LRTM2Q8N967 370 aa4.71□□□□□ -1.66
NUP98-208ENST00000461047 Q8N9W7 124 aa4.71□□□□□ -1.66
NUP98-208ENST00000461047 OR1L8Q8NGR8 309 aa4.71□□□□□ -1.66
NUP98-208ENST00000461047 OR5B3Q8NH48 314 aa4.71□□□□□ -1.66
NUP98-208ENST00000461047 MITD1Q8WV92 249 aa4.71□□□□□ -1.66
NUP98-208ENST00000461047 MRGPRFQ96AM1 343 aa4.71□□□□□ -1.66
NUP98-208ENST00000461047 C5orf30Q96GV9 206 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms