RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 ANXA3P12429 323 aa7.8□□□□□ -1.16
VPS45-204ENST00000460366 AKR1C4P17516 323 aa7.8□□□□□ -1.16
VPS45-204ENST00000460366 HLA-GP17693 338 aa7.8□□□□□ -1.16
VPS45-204ENST00000460366 VDAC1P21796 283 aa7.8□□□□□ -1.16
VPS45-204ENST00000460366 PPIFP30405 207 aaKnown RBP7.8□□□□□ -1.16
VPS45-204ENST00000460366 KRTAP10-3P60369 221 aa7.8□□□□□ -1.16
VPS45-204ENST00000460366 RPL8P62917 257 aaKnown RBP7.8□□□□□ -1.16
VPS45-204ENST00000460366 SRPXP78539 464 aa7.8□□□□□ -1.16
VPS45-204ENST00000460366 SSBP2P81877 361 aaPredicted RBP7.8□□□□□ -1.16
VPS45-204ENST00000460366 NDPQ00604 133 aa7.8□□□□□ -1.16
VPS45-204ENST00000460366 CFHR3Q02985 330 aa7.8□□□□□ -1.16
VPS45-204ENST00000460366 TMEM187Q14656 261 aa7.8□□□□□ -1.16
VPS45-204ENST00000460366 SP6Q3SY56 376 aa7.8□□□□□ -1.16
VPS45-204ENST00000460366 C19orf54Q5BKX5 351 aa7.8□□□□□ -1.16
VPS45-204ENST00000460366 SSX9Q7RTT3 188 aa7.8□□□□□ -1.16
VPS45-204ENST00000460366 CENPSQ8N2Z9 138 aa7.8□□□□□ -1.16
VPS45-204ENST00000460366 RNF152Q8N8N0 203 aa7.8□□□□□ -1.16
VPS45-204ENST00000460366 MINDY2Q8NBR6 621 aa7.8□□□□□ -1.16
VPS45-204ENST00000460366 OR5AU1Q8NGC0 362 aa7.8□□□□□ -1.16
VPS45-204ENST00000460366 TMEM56Q96MV1 263 aa7.8□□□□□ -1.16
VPS45-204ENST00000460366 NOL4LQ96MY1 436 aaPredicted RBP7.8□□□□□ -1.16
VPS45-204ENST00000460366 SPIN2AQ99865 258 aa7.8□□□□□ -1.16
VPS45-204ENST00000460366 SPIN2BQ9BPZ2 258 aa7.8□□□□□ -1.16
VPS45-204ENST00000460366 SRSF8Q9BRL6 282 aaKnown RBP7.8□□□□□ -1.16
VPS45-204ENST00000460366 ALX4Q9H161 411 aaPredicted RBP7.8□□□□□ -1.16
VPS45-204ENST00000460366 PARP11Q9NR21 331 aa7.8□□□□□ -1.16
VPS45-204ENST00000460366 TMEM140Q9NV12 185 aa7.8□□□□□ -1.16
VPS45-204ENST00000460366 FKBP11Q9NYL4 201 aa7.8□□□□□ -1.16
VPS45-204ENST00000460366 TBC1D24Q9ULP9 559 aa7.8□□□□□ -1.16
VPS45-204ENST00000460366 TMEM56-RWDD3S4R434 201 aa7.8□□□□□ -1.16
VPS45-204ENST00000460366 FBXO24O75426 580 aa7.79□□□□□ -1.16
VPS45-204ENST00000460366 SNAPC5O75971 98 aa7.79□□□□□ -1.16
VPS45-204ENST00000460366 BRI3O95415 125 aa7.79□□□□□ -1.16
VPS45-204ENST00000460366 TCRBP04435 133 aa7.79□□□□□ -1.16
VPS45-204ENST00000460366 ELANEP08246 267 aa7.79□□□□□ -1.16
VPS45-204ENST00000460366 P0C879 139 aa7.79□□□□□ -1.16
VPS45-204ENST00000460366 G6PCP35575 357 aa7.79□□□□□ -1.16
VPS45-204ENST00000460366 SUPT4H1P63272 117 aaKnown RBP7.79□□□□□ -1.16
VPS45-204ENST00000460366 CD83Q01151 205 aa7.79□□□□□ -1.16
VPS45-204ENST00000460366 IFITM3Q01628 133 aa7.79□□□□□ -1.16
VPS45-204ENST00000460366 FOXE3Q13461 319 aa7.79□□□□□ -1.16
VPS45-204ENST00000460366 TNXAQ16473 311 aa7.79□□□□□ -1.16
VPS45-204ENST00000460366 TRIM16LQ309B1 348 aa7.79□□□□□ -1.16
VPS45-204ENST00000460366 THOC7Q6I9Y2 204 aaKnown RBP7.79□□□□□ -1.16
VPS45-204ENST00000460366 TEX38Q6PEX7 206 aa7.79□□□□□ -1.16
VPS45-204ENST00000460366 H2BFWTQ7Z2G1 175 aa7.79□□□□□ -1.16
VPS45-204ENST00000460366 TMED4Q7Z7H5 227 aa7.79□□□□□ -1.16
VPS45-204ENST00000460366 FAM219AQ8IW50 185 aa7.79□□□□□ -1.16
VPS45-204ENST00000460366 OR4X2Q8NGF9 303 aa7.79□□□□□ -1.16
VPS45-204ENST00000460366 SRSF12Q8WXF0 261 aaKnown RBP7.79□□□□□ -1.16
VPS45-204ENST00000460366 RBPMSQ93062 196 aaKnown RBP7.79□□□□□ -1.16
VPS45-204ENST00000460366 PRNDQ9UKY0 176 aa7.79□□□□□ -1.16
VPS45-204ENST00000460366 FBXO7Q9Y3I1 522 aa7.79□□□□□ -1.16
VPS45-204ENST00000460366 FAM240BA0A1B0GVZ2 78 aa7.78□□□□□ -1.16
VPS45-204ENST00000460366 DUXBA0A1W2PPF3 345 aa7.78□□□□□ -1.16
VPS45-204ENST00000460366 MSGN1A6NI15 193 aa7.78□□□□□ -1.16
VPS45-204ENST00000460366 SFT2D2O95562 160 aa7.78□□□□□ -1.16
VPS45-204ENST00000460366 OPN1MWP04001 364 aa7.78□□□□□ -1.16
VPS45-204ENST00000460366 OPN1MW2P0DN77 364 aa7.78□□□□□ -1.16
VPS45-204ENST00000460366 OPN1MW3P0DN78 364 aa7.78□□□□□ -1.16
VPS45-204ENST00000460366 RPL27AP46776 148 aaKnown RBP7.78□□□□□ -1.16
VPS45-204ENST00000460366 DEFA1P59665 94 aa7.78□□□□□ -1.16
VPS45-204ENST00000460366 DEFA3P59666 94 aa7.78□□□□□ -1.16
VPS45-204ENST00000460366 GNB1P62873 340 aa7.78□□□□□ -1.16
VPS45-204ENST00000460366 UNQ5815/PRO19632Q6UWF5 114 aa7.78□□□□□ -1.16
VPS45-204ENST00000460366 ZNF329Q86UD4 541 aa7.78□□□□□ -1.16
VPS45-204ENST00000460366 NDUFA11Q86Y39 141 aa7.78□□□□□ -1.16
VPS45-204ENST00000460366 ZNF695Q8IW36 515 aa7.78□□□□□ -1.16
VPS45-204ENST00000460366 SELENOHQ8IZQ5 122 aaKnown RBP7.78□□□□□ -1.16
VPS45-204ENST00000460366 LGI3Q8N145 548 aa7.78□□□□□ -1.16
VPS45-204ENST00000460366 LRTM2Q8N967 370 aa7.78□□□□□ -1.16
VPS45-204ENST00000460366 DUSP18Q8NEJ0 188 aa7.78□□□□□ -1.16
VPS45-204ENST00000460366 OR5M8Q8NGP6 311 aa7.78□□□□□ -1.16
VPS45-204ENST00000460366 OR1L8Q8NGR8 309 aa7.78□□□□□ -1.16
VPS45-204ENST00000460366 GRPEL2Q8TAA5 225 aa7.78□□□□□ -1.16
VPS45-204ENST00000460366 ABHD5Q8WTS1 349 aa7.78□□□□□ -1.16
VPS45-204ENST00000460366 LSM10Q969L4 123 aaKnown RBP7.78□□□□□ -1.16
VPS45-204ENST00000460366 RRNAD1Q96FB5 475 aaKnown RBP7.78□□□□□ -1.16
VPS45-204ENST00000460366 COMMD5Q9GZQ3 224 aa7.78□□□□□ -1.16
VPS45-204ENST00000460366 ZFP57Q9NU63 452 aa7.78□□□□□ -1.16
VPS45-204ENST00000460366 TMEM14BQ9NUH8 114 aa7.78□□□□□ -1.16
VPS45-204ENST00000460366 CACFD1Q9UGQ2 172 aa7.78□□□□□ -1.16
VPS45-204ENST00000460366 LINC00527Q9UJ94 153 aa7.78□□□□□ -1.16
VPS45-204ENST00000460366 FOXA2Q9Y261 457 aaPredicted RBP7.78□□□□□ -1.16
VPS45-204ENST00000460366 ZNF257Q9Y2Q1 563 aa7.78□□□□□ -1.16
VPS45-204ENST00000460366 WSB1Q9Y6I7 421 aa7.78□□□□□ -1.16
VPS45-204ENST00000460366 TRAV3A0A0B4J244 114 aa7.77□□□□□ -1.17
VPS45-204ENST00000460366 A0A0B4J2A0 478 aa7.77□□□□□ -1.17
VPS45-204ENST00000460366 G3V318 75 aa7.77□□□□□ -1.17
VPS45-204ENST00000460366 H3BUA1 57 aa7.77□□□□□ -1.17
VPS45-204ENST00000460366 IGKV1-5P01602 117 aa7.77□□□□□ -1.17
VPS45-204ENST00000460366 OR9G9P0C7N8 305 aa7.77□□□□□ -1.17
VPS45-204ENST00000460366 VAMP1P23763 118 aa7.77□□□□□ -1.17
VPS45-204ENST00000460366 PSMB8P28062 276 aa7.77□□□□□ -1.17
VPS45-204ENST00000460366 MECP2P51608 486 aaKnown RBP7.77□□□□□ -1.17
VPS45-204ENST00000460366 AKR1C2P52895 323 aa7.77□□□□□ -1.17
VPS45-204ENST00000460366 OR2B8PP59922 312 aa7.77□□□□□ -1.17
VPS45-204ENST00000460366 PPP1R1AQ13522 171 aa7.77□□□□□ -1.17
VPS45-204ENST00000460366 TCTEX1D4Q5JR98 221 aa7.77□□□□□ -1.17
VPS45-204ENST00000460366 CXorf66Q5JRM2 361 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms