RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 TRAPPC2BP0DI82 140 aa9.8□□□□□ -0.84
HDAC4-206ENST00000460235 CNTFRP26992 372 aa9.8□□□□□ -0.84
HDAC4-206ENST00000460235 VDAC2P45880 294 aaPredicted RBP9.8□□□□□ -0.84
HDAC4-206ENST00000460235 SPCS3P61009 180 aa9.8□□□□□ -0.84
HDAC4-206ENST00000460235 HSPE1P61604 102 aaKnown RBP9.8□□□□□ -0.84
HDAC4-206ENST00000460235 ERHP84090 104 aaKnown RBP9.8□□□□□ -0.84
HDAC4-206ENST00000460235 RELBQ01201 579 aa9.8□□□□□ -0.84
HDAC4-206ENST00000460235 FOXL1Q12952 345 aa9.8□□□□□ -0.84
HDAC4-206ENST00000460235 NMSQ5H8A3 153 aa9.8□□□□□ -0.84
HDAC4-206ENST00000460235 Q8N2B8 174 aa9.8□□□□□ -0.84
HDAC4-206ENST00000460235 OR1L6Q8NGR2 347 aa9.8□□□□□ -0.84
HDAC4-206ENST00000460235 CIB3Q96Q77 187 aaPredicted RBP9.8□□□□□ -0.84
HDAC4-206ENST00000460235 QTRT1Q9BXR0 403 aaKnown RBP9.8□□□□□ -0.84
HDAC4-206ENST00000460235 C16orf95Q9H693 158 aa9.8□□□□□ -0.84
HDAC4-206ENST00000460235 TMEM14BQ9NUH8 114 aa9.8□□□□□ -0.84
HDAC4-206ENST00000460235 CACNG5Q9UF02 275 aa9.8□□□□□ -0.84
HDAC4-206ENST00000460235 ALG5Q9Y673 324 aa9.8□□□□□ -0.84
HDAC4-206ENST00000460235 CELSR1Q9NYQ6 3014 aa9.8□□□□□ -0.84
HDAC4-206ENST00000460235 VPS13CQ709C8 3753 aa9.79□□□□□ -0.84
HDAC4-206ENST00000460235 C13orf42A0A1B0GVH6 325 aa9.79□□□□□ -0.84
HDAC4-206ENST00000460235 DBX1A6NMT0 343 aa9.79□□□□□ -0.84
HDAC4-206ENST00000460235 FAM25EA8MYX2 175 aa9.79□□□□□ -0.84
HDAC4-206ENST00000460235 WRBO00258 174 aa9.79□□□□□ -0.84
HDAC4-206ENST00000460235 IGF1P05019 195 aa9.79□□□□□ -0.84
HDAC4-206ENST00000460235 SUB1P53999 127 aaKnown RBP eCLIP9.79□□□□□ -0.84
HDAC4-206ENST00000460235 ATP5IP56385 69 aaPredicted RBP9.79□□□□□ -0.84
HDAC4-206ENST00000460235 RPP30P78346 268 aaKnown RBP9.79□□□□□ -0.84
HDAC4-206ENST00000460235 IAH1Q2TAA2 248 aaPredicted RBP9.79□□□□□ -0.84
HDAC4-206ENST00000460235 AKIRIN2Q53H80 203 aa9.79□□□□□ -0.84
HDAC4-206ENST00000460235 COMMD1Q8N668 190 aa9.79□□□□□ -0.84
HDAC4-206ENST00000460235 SGMS2Q8NHU3 365 aa9.79□□□□□ -0.84
HDAC4-206ENST00000460235 LHFPL5Q8TAF8 219 aa9.79□□□□□ -0.84
HDAC4-206ENST00000460235 SRSF12Q8WXF0 261 aaKnown RBP9.79□□□□□ -0.84
HDAC4-206ENST00000460235 GPR146Q96CH1 333 aa9.79□□□□□ -0.84
HDAC4-206ENST00000460235 C2orf50Q96LR7 162 aa9.79□□□□□ -0.84
HDAC4-206ENST00000460235 HIPK2Q9H2X6 1198 aa9.79□□□□□ -0.84
HDAC4-206ENST00000460235 PLEKHA3Q9HB20 300 aa9.79□□□□□ -0.84
HDAC4-206ENST00000460235 PARP11Q9NR21 331 aa9.79□□□□□ -0.84
HDAC4-206ENST00000460235 IGHV7-81A0A0B4J1V7 117 aa9.78□□□□□ -0.84
HDAC4-206ENST00000460235 RLN2P04090 185 aa9.78□□□□□ -0.84
HDAC4-206ENST00000460235 AMY1AP04745 511 aa9.78□□□□□ -0.84
HDAC4-206ENST00000460235 P0C879 139 aa9.78□□□□□ -0.84
HDAC4-206ENST00000460235 PET100P0DJ07 73 aa9.78□□□□□ -0.84
HDAC4-206ENST00000460235 HKR1P10072 659 aa9.78□□□□□ -0.84
HDAC4-206ENST00000460235 PVALBP20472 110 aaPredicted RBP9.78□□□□□ -0.84
HDAC4-206ENST00000460235 BLCAPP62952 87 aa9.78□□□□□ -0.84
HDAC4-206ENST00000460235 AARDQ4LEZ3 155 aa9.78□□□□□ -0.84
HDAC4-206ENST00000460235 GRPEL2Q8TAA5 225 aa9.78□□□□□ -0.84
HDAC4-206ENST00000460235 TMEM158Q8WZ71 300 aa9.78□□□□□ -0.84
HDAC4-206ENST00000460235 HINT2Q9BX68 163 aa9.78□□□□□ -0.84
HDAC4-206ENST00000460235 GSKIPQ9P0R6 139 aa9.78□□□□□ -0.84
HDAC4-206ENST00000460235 TRAV41A0A0B4J266 112 aa9.77□□□□□ -0.85
HDAC4-206ENST00000460235 A0A0B4J293 547 aa9.77□□□□□ -0.85
HDAC4-206ENST00000460235 MSGN1A6NI15 193 aa9.77□□□□□ -0.85
HDAC4-206ENST00000460235 CEBPZOSA8MTT3 80 aa9.77□□□□□ -0.85
HDAC4-206ENST00000460235 FCN1O00602 326 aa9.77□□□□□ -0.85
HDAC4-206ENST00000460235 GOSR2O14653 212 aa9.77□□□□□ -0.85
HDAC4-206ENST00000460235 SCAF4O95104 1147 aaKnown RBP9.77□□□□□ -0.85
HDAC4-206ENST00000460235 OR9G9P0C7N8 305 aa9.77□□□□□ -0.85
HDAC4-206ENST00000460235 SNCAP37840 140 aa9.77□□□□□ -0.85
HDAC4-206ENST00000460235 NKX2-1P43699 371 aaPredicted RBP9.77□□□□□ -0.85
HDAC4-206ENST00000460235 CRIP2P52943 208 aaPredicted RBP9.77□□□□□ -0.85
HDAC4-206ENST00000460235 PRCDQ00LT1 54 aa9.77□□□□□ -0.85
HDAC4-206ENST00000460235 CENPVQ7Z7K6 275 aaPredicted RBP9.77□□□□□ -0.85
HDAC4-206ENST00000460235 OR5M8Q8NGP6 311 aa9.77□□□□□ -0.85
HDAC4-206ENST00000460235 FYTTD1Q96QD9 318 aaKnown RBP9.77□□□□□ -0.85
HDAC4-206ENST00000460235 PRR13Q9NZ81 148 aa9.77□□□□□ -0.85
HDAC4-206ENST00000460235 THYN1Q9P016 225 aa9.77□□□□□ -0.85
HDAC4-206ENST00000460235 MGAT4CQ9UBM8 478 aa9.77□□□□□ -0.85
HDAC4-206ENST00000460235 TEX50A0A1B0GTY4 177 aa9.76□□□□□ -0.85
HDAC4-206ENST00000460235 TMEM89A2RUT3 159 aa9.76□□□□□ -0.85
HDAC4-206ENST00000460235 CLPSL1A2RUU4 121 aa9.76□□□□□ -0.85
HDAC4-206ENST00000460235 INS-IGF2F8WCM5 200 aa9.76□□□□□ -0.85
HDAC4-206ENST00000460235 H3BUA1 57 aa9.76□□□□□ -0.85
HDAC4-206ENST00000460235 ST8SIA3O43173 380 aa9.76□□□□□ -0.85
HDAC4-206ENST00000460235 ADAP1O75689 374 aa9.76□□□□□ -0.85
HDAC4-206ENST00000460235 DEFA4P12838 97 aa9.76□□□□□ -0.85
HDAC4-206ENST00000460235 HIST1H1BP16401 226 aaKnown RBP9.76□□□□□ -0.85
HDAC4-206ENST00000460235 HOXA1P49639 335 aaPredicted RBP9.76□□□□□ -0.85
HDAC4-206ENST00000460235 RIPPLY3P57055 190 aa9.76□□□□□ -0.85
HDAC4-206ENST00000460235 OR2B8PP59922 312 aa9.76□□□□□ -0.85
HDAC4-206ENST00000460235 RRAS2P62070 204 aaPredicted RBP9.76□□□□□ -0.85
HDAC4-206ENST00000460235 TNFRSF9Q07011 255 aa9.76□□□□□ -0.85
HDAC4-206ENST00000460235 FGL1Q08830 312 aa9.76□□□□□ -0.85
HDAC4-206ENST00000460235 PJVKQ0ZLH3 352 aa9.76□□□□□ -0.85
HDAC4-206ENST00000460235 PDLIM3Q53GG5 364 aaPredicted RBP9.76□□□□□ -0.85
HDAC4-206ENST00000460235 UNQ5815/PRO19632Q6UWF5 114 aa9.76□□□□□ -0.85
HDAC4-206ENST00000460235 Q6ZNX1 250 aa9.76□□□□□ -0.85
HDAC4-206ENST00000460235 Q6ZSV7 163 aa9.76□□□□□ -0.85
HDAC4-206ENST00000460235 STPG2Q8N412 459 aa9.76□□□□□ -0.85
HDAC4-206ENST00000460235 ZBTB8BQ8NAP8 495 aaPredicted RBP9.76□□□□□ -0.85
HDAC4-206ENST00000460235 RAB40CQ96S21 281 aa9.76□□□□□ -0.85
HDAC4-206ENST00000460235 NMES1Q9C002 83 aa9.76□□□□□ -0.85
HDAC4-206ENST00000460235 ZNF702PQ9H963 129 aa9.76□□□□□ -0.85
HDAC4-206ENST00000460235 HEYLQ9NQ87 328 aaPredicted RBP9.76□□□□□ -0.85
HDAC4-206ENST00000460235 TPSG1Q9NRR2 321 aa9.76□□□□□ -0.85
HDAC4-206ENST00000460235 NDUFA4L2Q9NRX3 87 aa9.76□□□□□ -0.85
HDAC4-206ENST00000460235 HSPB7Q9UBY9 170 aa9.76□□□□□ -0.85
HDAC4-206ENST00000460235 NSG2Q9Y328 171 aa9.76□□□□□ -0.85
HDAC4-206ENST00000460235 ZNF469Q96JG9 3925 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms