RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 PAPPAQ13219 1627 aa13.61□□□□□ -0.23
HDAC7-217ENST00000459625 TYMSP04818 313 aa13.61□□□□□ -0.23
HDAC7-217ENST00000459625 MARVELD1Q9BSK0 173 aa13.61□□□□□ -0.23
HDAC7-217ENST00000459625 UNC13CQ8NB66 2214 aa13.61□□□□□ -0.23
HDAC7-217ENST00000459625 CECR9P0C854 216 aa13.61□□□□□ -0.23
HDAC7-217ENST00000459625 HOXA5P20719 270 aa13.61□□□□□ -0.23
HDAC7-217ENST00000459625 FOXD3Q9UJU5 478 aaPredicted RBP13.61□□□□□ -0.23
HDAC7-217ENST00000459625 CEACAM1P13688 526 aa13.61□□□□□ -0.23
HDAC7-217ENST00000459625 PPIFP30405 207 aaKnown RBP13.61□□□□□ -0.23
HDAC7-217ENST00000459625 PRSS53Q2L4Q9 553 aa13.61□□□□□ -0.23
HDAC7-217ENST00000459625 ST6GALNAC6Q969X2 333 aa13.61□□□□□ -0.23
HDAC7-217ENST00000459625 TNFSF18Q9UNG2 199 aa13.61□□□□□ -0.23
HDAC7-217ENST00000459625 A0A0G2JMM0 328 aa13.6□□□□□ -0.23
HDAC7-217ENST00000459625 A0A1W2PPB8 328 aa13.6□□□□□ -0.23
HDAC7-217ENST00000459625 A0A1W2PRS3 328 aa13.6□□□□□ -0.23
HDAC7-217ENST00000459625 KIR3DP1A8MWS1 328 aa13.6□□□□□ -0.23
HDAC7-217ENST00000459625 C21orf62Q9NYP8 219 aa13.6□□□□□ -0.23
HDAC7-217ENST00000459625 SCN1AP35498 2009 aa13.6□□□□□ -0.23
HDAC7-217ENST00000459625 MSGN1A6NI15 193 aa13.6□□□□□ -0.23
HDAC7-217ENST00000459625 CELA3BP08861 270 aa13.6□□□□□ -0.23
HDAC7-217ENST00000459625 TMEM219Q86XT9 240 aa13.6□□□□□ -0.23
HDAC7-217ENST00000459625 HLA-DRB1P01911 266 aa13.6□□□□□ -0.23
HDAC7-217ENST00000459625 PAPPA-AS1Q5QFB9 102 aa13.6□□□□□ -0.23
HDAC7-217ENST00000459625 MIXL1Q9H2W2 232 aa13.6□□□□□ -0.23
HDAC7-217ENST00000459625 PLSCR2Q9NRY7 297 aa13.6□□□□□ -0.23
HDAC7-217ENST00000459625 LHFPL6Q9Y693 200 aa13.6□□□□□ -0.23
HDAC7-217ENST00000459625 RP1P56715 2156 aa13.6□□□□□ -0.23
HDAC7-217ENST00000459625 NUP214P35658 2090 aaPredicted RBP13.6□□□□□ -0.23
HDAC7-217ENST00000459625 LRTM2Q8N967 370 aa13.6□□□□□ -0.23
HDAC7-217ENST00000459625 FAM57AQ8TBR7 257 aa13.6□□□□□ -0.23
HDAC7-217ENST00000459625 RPRMQ9NS64 109 aa13.6□□□□□ -0.23
HDAC7-217ENST00000459625 SIRT4Q9Y6E7 314 aaPredicted RBP13.6□□□□□ -0.23
HDAC7-217ENST00000459625 ATP5LO75964 103 aa13.59□□□□□ -0.23
HDAC7-217ENST00000459625 LEMD1Q68G75 181 aa13.59□□□□□ -0.23
HDAC7-217ENST00000459625 CITED2Q99967 270 aaPredicted RBP13.59□□□□□ -0.23
HDAC7-217ENST00000459625 MRPL20Q9BYC9 149 aaKnown RBP13.59□□□□□ -0.23
HDAC7-217ENST00000459625 LAMB1P07942 1786 aa13.59□□□□□ -0.23
HDAC7-217ENST00000459625 IGKV1-8A0A0C4DH67 115 aa13.59□□□□□ -0.23
HDAC7-217ENST00000459625 GNLYP22749 145 aa13.59□□□□□ -0.23
HDAC7-217ENST00000459625 GATA2P23769 480 aaPredicted RBP13.59□□□□□ -0.23
HDAC7-217ENST00000459625 CD300CQ08708 224 aa13.59□□□□□ -0.23
HDAC7-217ENST00000459625 ZNF146Q15072 292 aa13.59□□□□□ -0.23
HDAC7-217ENST00000459625 C7orf66A4D0T2 115 aa13.59□□□□□ -0.23
HDAC7-217ENST00000459625 OR11H4Q8NGC9 324 aa13.59□□□□□ -0.23
HDAC7-217ENST00000459625 CFDP00746 253 aaPredicted RBP13.59□□□□□ -0.23
HDAC7-217ENST00000459625 CCL3L1P16619 93 aa13.59□□□□□ -0.23
HDAC7-217ENST00000459625 CST9LQ9H4G1 147 aa13.59□□□□□ -0.23
HDAC7-217ENST00000459625 LAMA4Q16363 1823 aa13.59□□□□□ -0.23
HDAC7-217ENST00000459625 C1QTNF9BB2RNN3 333 aa13.59□□□□□ -0.23
HDAC7-217ENST00000459625 MUC1P15941 1255 aaPredicted RBP13.59□□□□□ -0.23
HDAC7-217ENST00000459625 LBHQ53QV2 105 aaPredicted RBP13.59□□□□□ -0.23
HDAC7-217ENST00000459625 TRAF4Q9BUZ4 470 aaPredicted RBP13.59□□□□□ -0.23
HDAC7-217ENST00000459625 CRIM1Q9NZV1 1036 aa13.58□□□□□ -0.23
HDAC7-217ENST00000459625 V9GYH0 126 aa13.58□□□□□ -0.23
HDAC7-217ENST00000459625 SERF2P84101 59 aa13.58□□□□□ -0.24
HDAC7-217ENST00000459625 CENPWQ5EE01 88 aa13.58□□□□□ -0.24
HDAC7-217ENST00000459625 Q6ZT83 130 aa13.58□□□□□ -0.24
HDAC7-217ENST00000459625 M0QZK8 103 aa13.58□□□□□ -0.24
HDAC7-217ENST00000459625 OR10J3Q5JRS4 329 aa13.58□□□□□ -0.24
HDAC7-217ENST00000459625 ERASQ7Z444 233 aa13.58□□□□□ -0.24
HDAC7-217ENST00000459625 KLF4O43474 513 aa13.58□□□□□ -0.24
HDAC7-217ENST00000459625 FOLR2P14207 255 aa13.58□□□□□ -0.24
HDAC7-217ENST00000459625 ZNF79Q15937 498 aa13.58□□□□□ -0.24
HDAC7-217ENST00000459625 TIMM23BQ5SRD1 257 aa13.58□□□□□ -0.24
HDAC7-217ENST00000459625 SPSB2Q99619 263 aa13.58□□□□□ -0.24
HDAC7-217ENST00000459625 NRIP2Q9BQI9 281 aa13.58□□□□□ -0.24
HDAC7-217ENST00000459625 SEC11BP0C7V7 166 aa13.57□□□□□ -0.24
HDAC7-217ENST00000459625 IGFBP2P18065 325 aa13.57□□□□□ -0.24
HDAC7-217ENST00000459625 TMEM91Q6ZNR0 172 aa13.57□□□□□ -0.24
HDAC7-217ENST00000459625 ADARB2-AS1A8MUL3 147 aa13.57□□□□□ -0.24
HDAC7-217ENST00000459625 OR11H12B2RN74 326 aa13.57□□□□□ -0.24
HDAC7-217ENST00000459625 TMEM250H0YL14 139 aa13.57□□□□□ -0.24
HDAC7-217ENST00000459625 PKIAP61925 76 aa13.57□□□□□ -0.24
HDAC7-217ENST00000459625 S100A7L2Q5SY68 101 aa13.57□□□□□ -0.24
HDAC7-217ENST00000459625 OR11H1Q8NG94 326 aa13.57□□□□□ -0.24
HDAC7-217ENST00000459625 OR11H2Q8NH07 326 aa13.57□□□□□ -0.24
HDAC7-217ENST00000459625 PKIBQ9C010 78 aa13.57□□□□□ -0.24
HDAC7-217ENST00000459625 PTGDSP41222 190 aa13.57□□□□□ -0.24
HDAC7-217ENST00000459625 ACP7Q6ZNF0 438 aa13.57□□□□□ -0.24
HDAC7-217ENST00000459625 ZIC4Q8N9L1 334 aa13.57□□□□□ -0.24
HDAC7-217ENST00000459625 OR5A1Q8NGJ0 315 aa13.57□□□□□ -0.24
HDAC7-217ENST00000459625 SLC25A28Q96A46 364 aa13.57□□□□□ -0.24
HDAC7-217ENST00000459625 CGAP01215 116 aa13.57□□□□□ -0.24
HDAC7-217ENST00000459625 LURAP1LQ8IV03 231 aa13.57□□□□□ -0.24
HDAC7-217ENST00000459625 MEF2BQ02080 365 aaPredicted RBP13.56□□□□□ -0.24
HDAC7-217ENST00000459625 ZNF414Q96IQ9 312 aa13.56□□□□□ -0.24
HDAC7-217ENST00000459625 SMIM13P0DJ93 91 aa13.56□□□□□ -0.24
HDAC7-217ENST00000459625 RAG2P55895 527 aa13.56□□□□□ -0.24
HDAC7-217ENST00000459625 SLC25A34Q6PIV7 304 aa13.56□□□□□ -0.24
HDAC7-217ENST00000459625 APOHP02749 345 aaPredicted RBP13.56□□□□□ -0.24
HDAC7-217ENST00000459625 CGB3P0DN86 165 aa13.56□□□□□ -0.24
HDAC7-217ENST00000459625 ARID1AO14497 2285 aa13.56□□□□□ -0.24
HDAC7-217ENST00000459625 SAMD13Q5VXD3 122 aa13.56□□□□□ -0.24
HDAC7-217ENST00000459625 HLA-DQA1P01909 254 aa13.56□□□□□ -0.24
HDAC7-217ENST00000459625 LINC00158P58513 81 aa13.56□□□□□ -0.24
HDAC7-217ENST00000459625 MEF2CQ06413 473 aaPredicted RBP13.56□□□□□ -0.24
HDAC7-217ENST00000459625 MCM3APO60318 1980 aa13.55□□□□□ -0.24
HDAC7-217ENST00000459625 IL6RP08887 468 aaPredicted RBP13.55□□□□□ -0.24
HDAC7-217ENST00000459625 C12orf54Q6X4T0 127 aa13.55□□□□□ -0.24
HDAC7-217ENST00000459625 TTC9CQ8N5M4 171 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms