RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 RPL27AP46776 148 aaKnown RBP4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 OR2B8PP59922 312 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 KRTAP10-9P60411 292 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 EIF4EBP1Q13541 118 aaPredicted RBP4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 PSG5Q15238 335 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 NDUFA5Q16718 116 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 C2orf68Q2NKX9 166 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 OR8G2PQ6IF36 304 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 FAM53AQ6NSI3 398 aaPredicted RBP4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 C16orf82Q7Z2V1 217 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 LHFPL4Q7Z7J7 247 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 KCNRGQ8N5I3 272 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 TMEM217Q8N7C4 229 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 OR5R1Q8NH85 324 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 PHYHIPLQ96FC7 376 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 TMEM68Q96MH6 324 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 AQP10Q96PS8 301 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 TBX15Q96SF7 602 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 SSX3Q99909 188 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 SRSF8Q9BRL6 282 aaKnown RBP4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 YAE1D1Q9NRH1 226 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 TCF19Q9Y242 345 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 BOD1L1Q8NFC6 3051 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 ZNF462Q96JM2 2506 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 IGHV3OR16-10A0A075B7F0 116 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 FAM24AA6NFZ4 105 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 LY6LH3BQJ8 138 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 KCNAB3O43448 404 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 PROP1O75360 226 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 PITX3O75364 302 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 FCN3O75636 299 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 CST7O76096 145 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 IGKV1-39P01597 117 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 PRH1P02810 166 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 OPN1MWP04001 364 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 IGKV1D-39P04432 117 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 OR9G9P0C7N8 305 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 OPN1MW2P0DN77 364 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 OPN1MW3P0DN78 364 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 OR13C7P0DN81 318 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 IGHV4-31P0DP07 118 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 LYL1P12980 280 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 NPY1RP25929 384 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 DYNLT3P51808 116 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 PRCDQ00LT1 54 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 RELBQ01201 579 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 EWSR1Q01844 656 aaKnown RBP eCLIP4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 PAX2Q02962 417 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 PRB3Q04118 309 aaPredicted RBP4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 AKR1C1Q04828 323 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 CD300CQ08708 224 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 FXYD3Q14802 87 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 AANATQ16613 207 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 LGALSLQ3ZCW2 172 aaPredicted RBP4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 PDLIM3Q53GG5 364 aaPredicted RBP4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 C9orf152Q5JTZ5 239 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 BRD3OSQ6XYD6 125 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 ETV3LQ6ZN32 361 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 BAP18Q8IXM2 172 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 PUSL1Q8N0Z8 303 aaKnown RBP4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 TMEM252Q8N6L7 170 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 SLC24A4Q8NFF2 622 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 OR5C1Q8NGR4 320 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 C1orf159Q96HA4 380 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 EAF1Q96JC9 268 aaPredicted RBP4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 SLC35E1Q96K37 410 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 JMJD8Q96S16 334 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 ATP5SQ99766 215 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 SLC25A33Q9BSK2 321 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 RNF126Q9BV68 326 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 GGACTQ9BVM4 153 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 TMUB1Q9BVT8 246 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 SMIM3Q9BZL3 60 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 MEGF9Q9H1U4 602 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 FBXL15Q9H469 300 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 ZNF355PQ9NSJ1 428 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 TMEM14BQ9NUH8 114 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 OR5AC2Q9NZP5 309 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 ZNRD1Q9P1U0 126 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 SIGLEC9Q9Y336 463 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 MOB4Q9Y3A3 225 aa4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 SPTAN1Q13813 2472 aaKnown RBP4.71□□□□□ -1.66
RNU1-88P-201ENST00000459274 EPG5Q9HCE0 2579 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 CR1P17927 2039 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 CFAP47Q6ZTR5 3102 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 TEX50A0A1B0GTY4 177 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 A0A1W2PPI3 338 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 H3BP45 60 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 MPDU1O75352 247 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 MT-CO2P00403 227 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 MBP02144 154 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 METTL15P1P0C7V9 234 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 HKR1P10072 659 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 HIST1H1BP16401 226 aaKnown RBP4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 OPRK1P41145 380 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 RAB5CP51148 216 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 DLX1P56177 255 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 LINC00205P59089 165 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 BLOC1S1P78537 153 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 NHLH2Q02577 135 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms