RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 PPIHO43447 177 aaKnown RBP9.82□□□□□ -0.84
SYNE2-207ENST00000458046 IL18BPO95998 194 aa9.82□□□□□ -0.84
SYNE2-207ENST00000458046 SELEP16581 610 aa9.82□□□□□ -0.84
SYNE2-207ENST00000458046 SPANXN5Q5MJ07 72 aa9.82□□□□□ -0.84
SYNE2-207ENST00000458046 Q6P435 159 aa9.82□□□□□ -0.84
SYNE2-207ENST00000458046 ZNF880Q6PDB4 577 aa9.82□□□□□ -0.84
SYNE2-207ENST00000458046 SSX7Q7RTT5 188 aa9.82□□□□□ -0.84
SYNE2-207ENST00000458046 H2BFWTQ7Z2G1 175 aa9.82□□□□□ -0.84
SYNE2-207ENST00000458046 MDP1Q86V88 176 aa9.82□□□□□ -0.84
SYNE2-207ENST00000458046 C1QL4Q86Z23 238 aa9.82□□□□□ -0.84
SYNE2-207ENST00000458046 OR10X1Q8NGY0 326 aa9.82□□□□□ -0.84
SYNE2-207ENST00000458046 DEFB127Q9H1M4 99 aa9.82□□□□□ -0.84
SYNE2-207ENST00000458046 LOC105371242A0A075B767 164 aa9.81□□□□□ -0.84
SYNE2-207ENST00000458046 TRBV6-6A0A0A6YYG2 114 aa9.81□□□□□ -0.84
SYNE2-207ENST00000458046 A0A1W2PNU3 283 aaPredicted RBP9.81□□□□□ -0.84
SYNE2-207ENST00000458046 OR5B21A6NL26 309 aa9.81□□□□□ -0.84
SYNE2-207ENST00000458046 NPIPB6E9PJ23 425 aa9.81□□□□□ -0.84
SYNE2-207ENST00000458046 CYB5BO43169 146 aa9.81□□□□□ -0.84
SYNE2-207ENST00000458046 OR2H2O95918 312 aa9.81□□□□□ -0.84
SYNE2-207ENST00000458046 VPREB1P12018 145 aa9.81□□□□□ -0.84
SYNE2-207ENST00000458046 CD200P41217 278 aa9.81□□□□□ -0.84
SYNE2-207ENST00000458046 RPL19P84098 196 aaKnown RBP9.81□□□□□ -0.84
SYNE2-207ENST00000458046 OR8G1Q15617 311 aa9.81□□□□□ -0.84
SYNE2-207ENST00000458046 ZNF726P1Q15940 193 aa9.81□□□□□ -0.84
SYNE2-207ENST00000458046 ZNF585BQ52M93 769 aa9.81□□□□□ -0.84
SYNE2-207ENST00000458046 KHDC3LQ587J8 217 aa9.81□□□□□ -0.84
SYNE2-207ENST00000458046 ST6GALNAC3Q8NDV1 305 aa9.81□□□□□ -0.84
SYNE2-207ENST00000458046 DOK5Q9P104 306 aa9.81□□□□□ -0.84
SYNE2-207ENST00000458046 CDIPTO14735 213 aa9.81□□□□□ -0.84
SYNE2-207ENST00000458046 HOXA4Q00056 320 aaPredicted RBP9.81□□□□□ -0.84
SYNE2-207ENST00000458046 DCAF10Q5QP82 559 aa9.81□□□□□ -0.84
SYNE2-207ENST00000458046 FBXW9Q5XUX1 488 aa9.81□□□□□ -0.84
SYNE2-207ENST00000458046 ZNF787Q6DD87 383 aa9.81□□□□□ -0.84
SYNE2-207ENST00000458046 FAM53AQ6NSI3 398 aaPredicted RBP9.81□□□□□ -0.84
SYNE2-207ENST00000458046 WDR86Q86TI4 376 aa9.81□□□□□ -0.84
SYNE2-207ENST00000458046 LINC00596Q86U02 117 aa9.81□□□□□ -0.84
SYNE2-207ENST00000458046 CABLES2Q9BTV7 478 aa9.81□□□□□ -0.84
SYNE2-207ENST00000458046 SPRY4Q9C004 299 aa9.81□□□□□ -0.84
SYNE2-207ENST00000458046 TMPRSS5Q9H3S3 457 aa9.81□□□□□ -0.84
SYNE2-207ENST00000458046 TREM2Q9NZC2 230 aa9.81□□□□□ -0.84
SYNE2-207ENST00000458046 OR14J1Q9UGF5 321 aa9.81□□□□□ -0.84
SYNE2-207ENST00000458046 ESPL1Q14674 2120 aa9.81□□□□□ -0.84
SYNE2-207ENST00000458046 A0A087WWC5 75 aa9.8□□□□□ -0.84
SYNE2-207ENST00000458046 IFITM10A6NMD0 228 aa9.8□□□□□ -0.84
SYNE2-207ENST00000458046 HOXA5P20719 270 aa9.8□□□□□ -0.84
SYNE2-207ENST00000458046 GLIPR1P48060 266 aa9.8□□□□□ -0.84
SYNE2-207ENST00000458046 PDLIM4P50479 330 aa9.8□□□□□ -0.84
SYNE2-207ENST00000458046 SPNS3Q6ZMD2 512 aa9.8□□□□□ -0.84
SYNE2-207ENST00000458046 ZNF525Q8N782 197 aa9.8□□□□□ -0.84
SYNE2-207ENST00000458046 CFAP47Q6ZTR5 3102 aa9.8□□□□□ -0.84
SYNE2-207ENST00000458046 MED13Q9UHV7 2174 aa9.8□□□□□ -0.84
SYNE2-207ENST00000458046 KIAA2026Q5HYC2 2103 aa9.8□□□□□ -0.84
SYNE2-207ENST00000458046 CLDN34H7C241 214 aa9.8□□□□□ -0.84
SYNE2-207ENST00000458046 J3QT63 122 aa9.8□□□□□ -0.84
SYNE2-207ENST00000458046 TRGC2P03986 189 aa9.8□□□□□ -0.84
SYNE2-207ENST00000458046 GCSHP23434 173 aa9.8□□□□□ -0.84
SYNE2-207ENST00000458046 CEACAM8P31997 349 aaPredicted RBP9.8□□□□□ -0.84
SYNE2-207ENST00000458046 MEOX1P50221 254 aa9.8□□□□□ -0.84
SYNE2-207ENST00000458046 PDZD11Q5EBL8 140 aa9.8□□□□□ -0.84
SYNE2-207ENST00000458046 OR8G2PQ6IF36 304 aa9.8□□□□□ -0.84
SYNE2-207ENST00000458046 DPPA3Q6W0C5 159 aa9.8□□□□□ -0.84
SYNE2-207ENST00000458046 SCCPDHQ8NBX0 429 aa9.8□□□□□ -0.84
SYNE2-207ENST00000458046 GGACTQ9BVM4 153 aa9.8□□□□□ -0.84
SYNE2-207ENST00000458046 OR2J1Q9GZK6 312 aa9.8□□□□□ -0.84
SYNE2-207ENST00000458046 DSPP15924 2871 aaKnown RBP9.8□□□□□ -0.84
SYNE2-207ENST00000458046 DIDO1Q9BTC0 2240 aaKnown RBP9.8□□□□□ -0.84
SYNE2-207ENST00000458046 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.79□□□□□ -0.84
SYNE2-207ENST00000458046 SLC25A6P12236 298 aa9.79□□□□□ -0.84
SYNE2-207ENST00000458046 SLC35E3Q7Z769 313 aa9.79□□□□□ -0.84
SYNE2-207ENST00000458046 LSM10Q969L4 123 aaKnown RBP9.79□□□□□ -0.84
SYNE2-207ENST00000458046 OR4C12Q96R67 309 aa9.79□□□□□ -0.84
SYNE2-207ENST00000458046 MED12LQ86YW9 2145 aa9.79□□□□□ -0.84
SYNE2-207ENST00000458046 TNRC6AQ8NDV7 1962 aaKnown RBP9.79□□□□□ -0.84
SYNE2-207ENST00000458046 KBTBD11-OT1A0A1B0GTJ5 212 aa9.79□□□□□ -0.84
SYNE2-207ENST00000458046 HMGB3O15347 200 aaKnown RBP9.79□□□□□ -0.84
SYNE2-207ENST00000458046 NPSP0C0P6 89 aa9.79□□□□□ -0.84
SYNE2-207ENST00000458046 ZNF497Q6ZNH5 498 aa9.79□□□□□ -0.84
SYNE2-207ENST00000458046 DRAM1Q8N682 238 aa9.79□□□□□ -0.84
SYNE2-207ENST00000458046 ARRDC1-AS1Q9H2J1 176 aa9.79□□□□□ -0.84
SYNE2-207ENST00000458046 CLN8Q9UBY8 286 aa9.79□□□□□ -0.84
SYNE2-207ENST00000458046 TRAV1-1A0A0B4J248 108 aa9.79□□□□□ -0.84
SYNE2-207ENST00000458046 CEBPZOSA8MTT3 80 aa9.79□□□□□ -0.84
SYNE2-207ENST00000458046 HIST1H2BKO60814 126 aa9.79□□□□□ -0.84
SYNE2-207ENST00000458046 HIST1H2BJP06899 126 aa9.79□□□□□ -0.84
SYNE2-207ENST00000458046 SP1P08047 785 aa9.79□□□□□ -0.84
SYNE2-207ENST00000458046 BCL2P10415 239 aa9.79□□□□□ -0.84
SYNE2-207ENST00000458046 CD33P20138 364 aa9.79□□□□□ -0.84
SYNE2-207ENST00000458046 HIST1H2BOP23527 126 aa9.79□□□□□ -0.84
SYNE2-207ENST00000458046 HIST1H2BBP33778 126 aa9.79□□□□□ -0.84
SYNE2-207ENST00000458046 HIST1H2BDP58876 126 aa9.79□□□□□ -0.84
SYNE2-207ENST00000458046 HIST1H2BCP62807 126 aa9.79□□□□□ -0.84
SYNE2-207ENST00000458046 SLC10A1Q14973 349 aa9.79□□□□□ -0.84
SYNE2-207ENST00000458046 HIST2H2BEQ16778 126 aa9.79□□□□□ -0.84
SYNE2-207ENST00000458046 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.79□□□□□ -0.84
SYNE2-207ENST00000458046 GFI1BQ5VTD9 330 aa9.79□□□□□ -0.84
SYNE2-207ENST00000458046 HIST1H2BHQ93079 126 aa9.79□□□□□ -0.84
SYNE2-207ENST00000458046 HIST1H2BNQ99877 126 aa9.79□□□□□ -0.84
SYNE2-207ENST00000458046 HIST1H2BMQ99879 126 aa9.79□□□□□ -0.84
SYNE2-207ENST00000458046 RTL8AQ9BWD3 113 aa9.79□□□□□ -0.84
SYNE2-207ENST00000458046 KRASP01116 189 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms