RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 ZNF439Q8NDP4 499 aa8.55□□□□□ -1.04
CLIP4-208ENST00000456385 OR4F17Q8NGA8 305 aa8.55□□□□□ -1.04
CLIP4-208ENST00000456385 RFESDQ8TAC1 157 aa8.55□□□□□ -1.04
CLIP4-208ENST00000456385 MRGPRDQ8TDS7 321 aa8.55□□□□□ -1.04
CLIP4-208ENST00000456385 KCNIP1Q9NZI2 227 aa8.55□□□□□ -1.04
CLIP4-208ENST00000456385 CDC42EP3Q9UKI2 254 aa8.55□□□□□ -1.04
CLIP4-208ENST00000456385 MRPS16Q9Y3D3 137 aaKnown RBP8.55□□□□□ -1.04
CLIP4-208ENST00000456385 PRRC2CQ9Y520 2896 aaKnown RBP8.55□□□□□ -1.04
CLIP4-208ENST00000456385 FAM166BA8MTA8 275 aa8.54□□□□□ -1.04
CLIP4-208ENST00000456385 PRSS46E5RG02 174 aa8.54□□□□□ -1.04
CLIP4-208ENST00000456385 WISP2O76076 250 aa8.54□□□□□ -1.04
CLIP4-208ENST00000456385 ACTL6BO94805 426 aa8.54□□□□□ -1.04
CLIP4-208ENST00000456385 IGLL1P15814 213 aa8.54□□□□□ -1.04
CLIP4-208ENST00000456385 OTX2P32243 289 aa8.54□□□□□ -1.04
CLIP4-208ENST00000456385 SSTR5P35346 364 aa8.54□□□□□ -1.04
CLIP4-208ENST00000456385 ERVK11-1P61568 191 aa8.54□□□□□ -1.04
CLIP4-208ENST00000456385 SLAQ13239 276 aa8.54□□□□□ -1.04
CLIP4-208ENST00000456385 WDR73Q6P4I2 378 aa8.54□□□□□ -1.04
CLIP4-208ENST00000456385 Q6ZR03 302 aa8.54□□□□□ -1.04
CLIP4-208ENST00000456385 C11orf52Q96A22 123 aa8.54□□□□□ -1.04
CLIP4-208ENST00000456385 FAM234AQ9H0X4 552 aa8.54□□□□□ -1.04
CLIP4-208ENST00000456385 HEYLQ9NQ87 328 aaPredicted RBP8.54□□□□□ -1.04
CLIP4-208ENST00000456385 TRAV3A0A0B4J244 114 aa8.54□□□□□ -1.04
CLIP4-208ENST00000456385 HELTA6NFD8 242 aa8.54□□□□□ -1.04
CLIP4-208ENST00000456385 WNT9BO14905 357 aa8.54□□□□□ -1.04
CLIP4-208ENST00000456385 MPDU1O75352 247 aa8.54□□□□□ -1.04
CLIP4-208ENST00000456385 MT-ND6P03923 174 aa8.54□□□□□ -1.04
CLIP4-208ENST00000456385 GRPP07492 148 aa8.54□□□□□ -1.04
CLIP4-208ENST00000456385 TNFSF4P23510 183 aa8.54□□□□□ -1.04
CLIP4-208ENST00000456385 TNXAQ16473 311 aa8.54□□□□□ -1.04
CLIP4-208ENST00000456385 PRR31Q5SQ13 230 aa8.54□□□□□ -1.04
CLIP4-208ENST00000456385 CXorf67Q86X51 503 aaPredicted RBP8.54□□□□□ -1.04
CLIP4-208ENST00000456385 STPG3Q8N7X2 389 aa8.54□□□□□ -1.04
CLIP4-208ENST00000456385 NINJ1Q92982 152 aa8.54□□□□□ -1.04
CLIP4-208ENST00000456385 ST6GALNAC6Q969X2 333 aa8.54□□□□□ -1.04
CLIP4-208ENST00000456385 TMEM45BQ96B21 275 aa8.54□□□□□ -1.04
CLIP4-208ENST00000456385 WDR54Q9H977 334 aa8.54□□□□□ -1.04
CLIP4-208ENST00000456385 PSG11Q9UQ72 335 aa8.54□□□□□ -1.04
CLIP4-208ENST00000456385 LY6G6EA0A0G2JKS1 128 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 IGLC7A0M8Q6 106 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 HAND1O96004 215 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 ZNF146Q15072 292 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 VAMP3Q15836 100 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 LTC4SQ16873 150 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 ALKBH6Q3KRA9 238 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 EBLN2Q6P2I7 272 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 SMRP1Q8NCR6 262 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 NEUROG1Q92886 237 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 TAAR6Q96RI8 345 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 SERTAD4Q9NUC0 356 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 U3KQA8 63 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 CBY3A6NI87 242 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 GFRA3O60609 400 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 FCGR3BO75015 233 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 APCSP02743 223 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 AMY1AP04745 511 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 CELA3AP09093 270 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 S100A7P31151 101 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 GABRA2P47869 451 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 PLP2Q04941 152 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 FOXF2Q12947 444 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 AARDQ4LEZ3 155 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 MIR17HGQ75NE6 70 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 SPATA12Q7Z6I5 190 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 KIR3DL3Q8N743 410 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 NHLRC2Q8NBF2 726 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 ZNF784Q8NCA9 323 aaPredicted RBP8.53□□□□□ -1.04
CLIP4-208ENST00000456385 C18orf32Q8TCD1 76 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 Q8TCH9 128 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 FAM168AQ92567 244 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 HES4Q9HCC6 221 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 TECRQ9NZ01 308 aaKnown RBP8.53□□□□□ -1.04
CLIP4-208ENST00000456385 LSM4Q9Y4Z0 139 aaKnown RBP8.53□□□□□ -1.04
CLIP4-208ENST00000456385 LY96Q9Y6Y9 160 aa8.53□□□□□ -1.04
CLIP4-208ENST00000456385 IGHV1-69-2A0A0G2JMI3 117 aa8.52□□□□□ -1.05
CLIP4-208ENST00000456385 TMEM30CPA0ZSE6 113 aa8.52□□□□□ -1.05
CLIP4-208ENST00000456385 PROP1O75360 226 aa8.52□□□□□ -1.05
CLIP4-208ENST00000456385 IGHV3-13P01766 116 aa8.52□□□□□ -1.05
CLIP4-208ENST00000456385 IGHV3-7P01780 117 aa8.52□□□□□ -1.05
CLIP4-208ENST00000456385 REG1AP05451 166 aa8.52□□□□□ -1.05
CLIP4-208ENST00000456385 MGST1P10620 155 aaKnown RBP8.52□□□□□ -1.05
CLIP4-208ENST00000456385 RHOBP62745 196 aa8.52□□□□□ -1.05
CLIP4-208ENST00000456385 Q0VFX4 171 aa8.52□□□□□ -1.05
CLIP4-208ENST00000456385 PSG5Q15238 335 aa8.52□□□□□ -1.05
CLIP4-208ENST00000456385 PRAMEF5Q5TYX0 476 aa8.52□□□□□ -1.05
CLIP4-208ENST00000456385 PRAMEF6Q5VXH4 476 aa8.52□□□□□ -1.05
CLIP4-208ENST00000456385 C19orf35Q6ZS72 473 aa8.52□□□□□ -1.05
CLIP4-208ENST00000456385 ZNF826PQ6ZT77 177 aa8.52□□□□□ -1.05
CLIP4-208ENST00000456385 MUC15Q8N387 334 aa8.52□□□□□ -1.05
CLIP4-208ENST00000456385 RTL8AQ9BWD3 113 aa8.52□□□□□ -1.05
CLIP4-208ENST00000456385 SSBP3Q9BWW4 388 aaPredicted RBP8.52□□□□□ -1.05
CLIP4-208ENST00000456385 GP6Q9HCN6 339 aa8.52□□□□□ -1.05
CLIP4-208ENST00000456385 IGKV3D-15A0A087WSY6 115 aa8.52□□□□□ -1.05
CLIP4-208ENST00000456385 TRAV9-2A0A087WT02 112 aa8.52□□□□□ -1.05
CLIP4-208ENST00000456385 FAM181BA6NEQ2 426 aa8.52□□□□□ -1.05
CLIP4-208ENST00000456385 OR10J4P0C629 311 aa8.52□□□□□ -1.05
CLIP4-208ENST00000456385 CCL4P13236 92 aa8.52□□□□□ -1.05
CLIP4-208ENST00000456385 ARR3P36575 388 aa8.52□□□□□ -1.05
CLIP4-208ENST00000456385 VDAC2P45880 294 aaPredicted RBP8.52□□□□□ -1.05
CLIP4-208ENST00000456385 LDLRAD2Q5SZI1 272 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms