RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 NPBQ8NG41 125 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 OR11G2Q8NGC1 345 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 OR51A4Q8NGJ6 313 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 FAM104AQ969W3 186 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 HIST1H2BAQ96A08 127 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 TMEM106AQ96A25 262 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 LYZL4Q96KX0 146 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 DERL3Q96Q80 235 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 CAMK2N2Q96S95 79 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 PEBP4Q96S96 227 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 GPX7Q96SL4 187 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 ZNF106Q9H2Y7 1883 aaKnown RBP3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 SND1-IT1Q9HBX3 110 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 ZNF492Q9P255 531 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 KIF13BQ9NQT8 1826 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 CECR2Q9BXF3 1484 aa3.22□□□□□ -1.89
HMGB3P21-201ENST00000452483 TMEM218A2RU14 115 aa3.22□□□□□ -1.89
HMGB3P21-201ENST00000452483 LINC00862A6NCI5 91 aa3.22□□□□□ -1.89
HMGB3P21-201ENST00000452483 MEIS3P1A6NDR6 274 aa3.22□□□□□ -1.89
HMGB3P21-201ENST00000452483 J3QQQ9 107 aa3.22□□□□□ -1.89
HMGB3P21-201ENST00000452483 SERF1AO75920 110 aa3.22□□□□□ -1.89
HMGB3P21-201ENST00000452483 SLC25A14O95258 325 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P21-201ENST00000452483 TRGC2P03986 189 aa3.22□□□□□ -1.89
HMGB3P21-201ENST00000452483 GPX1P07203 203 aa3.22□□□□□ -1.89
HMGB3P21-201ENST00000452483 ELK1P19419 428 aa3.22□□□□□ -1.89
HMGB3P21-201ENST00000452483 CASP1P29466 404 aa3.22□□□□□ -1.89
HMGB3P21-201ENST00000452483 OPRM1P35372 400 aa3.22□□□□□ -1.89
HMGB3P21-201ENST00000452483 RAB5CP51148 216 aa3.22□□□□□ -1.89
HMGB3P21-201ENST00000452483 RBM11P57052 281 aaKnown RBP3.22□□□□□ -1.89
HMGB3P21-201ENST00000452483 TIMM10P62072 90 aa3.22□□□□□ -1.89
HMGB3P21-201ENST00000452483 ATP5G2Q06055 141 aa3.22□□□□□ -1.89
HMGB3P21-201ENST00000452483 TMEM183BQ1AE95 376 aa3.22□□□□□ -1.89
HMGB3P21-201ENST00000452483 TMEM244Q5VVB8 128 aa3.22□□□□□ -1.89
HMGB3P21-201ENST00000452483 GLIPR1L1Q6UWM5 242 aa3.22□□□□□ -1.89
HMGB3P21-201ENST00000452483 TMEM183AQ8IXX5 376 aa3.22□□□□□ -1.89
HMGB3P21-201ENST00000452483 OR4K5Q8NGD3 323 aa3.22□□□□□ -1.89
HMGB3P21-201ENST00000452483 SFT2D1Q8WV19 159 aa3.22□□□□□ -1.89
HMGB3P21-201ENST00000452483 TM2D3Q9BRN9 247 aa3.22□□□□□ -1.89
HMGB3P21-201ENST00000452483 NKX6-2Q9C056 277 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P21-201ENST00000452483 FGF23Q9GZV9 251 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P21-201ENST00000452483 SCN3BQ9NY72 215 aa3.22□□□□□ -1.89
HMGB3P21-201ENST00000452483 MCTS1Q9ULC4 181 aaKnown RBP3.22□□□□□ -1.89
HMGB3P21-201ENST00000452483 SIGLEC1Q9BZZ2 1709 aa3.22□□□□□ -1.89
HMGB3P21-201ENST00000452483 TRIP12Q14669 1992 aaPredicted RBP3.21□□□□□ -1.89
HMGB3P21-201ENST00000452483 DISP2A7MBM2 1401 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 TRAV41A0A0B4J266 112 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 LOC107984640A0A0U1RRK4 108 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 TLCD2A6NGC4 264 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 IGLL5B9A064 214 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 INS-IGF2F8WCM5 200 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 SOCS3O14543 225 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 RBFOX2O43251 390 aaKnown RBP eCLIP3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 SCO1O75880 301 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 SNAPC5O75971 98 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 MAS1P04201 325 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 SRP19P09132 144 aaKnown RBP3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 LINC00869P0C866 280 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 LINC00694P0DN24 101 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 GUCA1AP43080 201 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 NDUFA6P56556 154 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 PDGFRLQ15198 375 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 KRTAP27-1Q3LI81 207 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 LDLRAD2Q5SZI1 272 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 BCL2L15Q5TBC7 163 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 LYPD2Q6UXB3 125 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 CAMK2N1Q7Z7J9 78 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 LHFPL1Q86WI0 220 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 SNX29P2Q8IUI4 249 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 PRR15Q8IV56 129 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 MMGT1Q8N4V1 131 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 OR2T10Q8NGZ9 312 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 PPTC7Q8NI37 304 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 LMO3Q8TAP4 145 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 TEX37Q96LM6 180 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 OTORQ9NRC9 128 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 SOX21Q9Y651 276 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 RAPGEF2Q9Y4G8 1499 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 MYO5BQ9ULV0 1848 aa3.21□□□□□ -1.9
HMGB3P21-201ENST00000452483 IZUMO1RA6ND01 250 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 TMEM212A6NML5 194 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 FAM72CH0Y354 149 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 TAX1BP3O14907 124 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 NPFFO15130 113 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 PLA2G10O15496 165 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 IGLV2-23P01705 113 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 IGHV3-11P01762 117 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 IGLC6P0CF74 106 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 AKAIN1P0CW23 69 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 SDC2P34741 201 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 GNG4P50150 75 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 NUDT2P50583 147 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 INSL3P51460 131 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 RRN3P1Q2M238 152 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 ZNF181Q2M3W8 571 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 NCMAPQ5T1S8 102 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 FAM72AQ5TYM5 149 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 C1orf140Q5VVS0 124 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 Q5XG85 94 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 FAM72DQ6L9T8 149 aa3.2□□□□□ -1.9
HMGB3P21-201ENST00000452483 SLC25A34Q6PIV7 304 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 193.1 ms