RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 AIFM2Q9BRQ8 373 aa9.46□□□□□ -0.9
CPSF4-208ENST00000452047 MRPS26Q9BYN8 205 aaKnown RBP9.46□□□□□ -0.9
CPSF4-208ENST00000452047 PLEKHA2Q9HB19 425 aa9.46□□□□□ -0.9
CPSF4-208ENST00000452047 PEMTQ9UBM1 199 aa9.46□□□□□ -0.9
CPSF4-208ENST00000452047 FBXL7Q9UJT9 491 aa9.46□□□□□ -0.9
CPSF4-208ENST00000452047 IGLV11-55A0A075B6I3 123 aa9.45□□□□□ -0.9
CPSF4-208ENST00000452047 TRAV3A0A0B4J244 114 aa9.45□□□□□ -0.9
CPSF4-208ENST00000452047 IGLC7A0M8Q6 106 aa9.45□□□□□ -0.9
CPSF4-208ENST00000452047 S1PR2O95136 353 aa9.45□□□□□ -0.9
CPSF4-208ENST00000452047 NDUFB8O95169 186 aa9.45□□□□□ -0.9
CPSF4-208ENST00000452047 HLA-AP01891 365 aaKnown RBP9.45□□□□□ -0.9
CPSF4-208ENST00000452047 REG1AP05451 166 aa9.45□□□□□ -0.9
CPSF4-208ENST00000452047 TAS2R46P59540 309 aa9.45□□□□□ -0.9
CPSF4-208ENST00000452047 NCS1P62166 190 aa9.45□□□□□ -0.9
CPSF4-208ENST00000452047 AADACL3Q5VUY0 350 aa9.45□□□□□ -0.9
CPSF4-208ENST00000452047 SGPP2Q8IWX5 399 aa9.45□□□□□ -0.9
CPSF4-208ENST00000452047 OR2K2Q8NGT1 345 aa9.45□□□□□ -0.9
CPSF4-208ENST00000452047 CD300LFQ8TDQ1 290 aa9.45□□□□□ -0.9
CPSF4-208ENST00000452047 BORCS5Q969J3 196 aa9.45□□□□□ -0.9
CPSF4-208ENST00000452047 ZNF2Q9BSG1 426 aaPredicted RBP9.45□□□□□ -0.9
CPSF4-208ENST00000452047 FUNDC2Q9BWH2 189 aa9.45□□□□□ -0.9
CPSF4-208ENST00000452047 FXYD6Q9H0Q3 95 aa9.45□□□□□ -0.9
CPSF4-208ENST00000452047 HRASLSQ9HDD0 168 aa9.45□□□□□ -0.9
CPSF4-208ENST00000452047 TMEM140Q9NV12 185 aa9.45□□□□□ -0.9
CPSF4-208ENST00000452047 COMMD9Q9P000 198 aa9.45□□□□□ -0.9
CPSF4-208ENST00000452047 C3orf84H3BNL1 204 aa9.44□□□□□ -0.9
CPSF4-208ENST00000452047 LGALS9O00182 355 aa9.44□□□□□ -0.9
CPSF4-208ENST00000452047 UPK2O00526 184 aa9.44□□□□□ -0.9
CPSF4-208ENST00000452047 GGCTO75223 188 aaKnown RBP9.44□□□□□ -0.9
CPSF4-208ENST00000452047 DHFRP00374 187 aa9.44□□□□□ -0.9
CPSF4-208ENST00000452047 IGHV3-23P01764 117 aa9.44□□□□□ -0.9
CPSF4-208ENST00000452047 PMP2P02689 132 aa9.44□□□□□ -0.9
CPSF4-208ENST00000452047 RLN1P04808 185 aa9.44□□□□□ -0.9
CPSF4-208ENST00000452047 EDN2P20800 178 aa9.44□□□□□ -0.9
CPSF4-208ENST00000452047 PRSS3P35030 304 aa9.44□□□□□ -0.9
CPSF4-208ENST00000452047 LYSMD2Q8IV50 215 aa9.44□□□□□ -0.9
CPSF4-208ENST00000452047 OR5H2Q8NGV7 314 aa9.44□□□□□ -0.9
CPSF4-208ENST00000452047 GPX8Q8TED1 209 aa9.44□□□□□ -0.9
CPSF4-208ENST00000452047 ZMAT4Q9H898 229 aa9.44□□□□□ -0.9
CPSF4-208ENST00000452047 S4R3C0 116 aa9.44□□□□□ -0.9
CPSF4-208ENST00000452047 MFSD2BA6NFX1 497 aa9.43□□□□□ -0.9
CPSF4-208ENST00000452047 C2orf70A6NJV1 201 aa9.43□□□□□ -0.9
CPSF4-208ENST00000452047 PGLYRP1O75594 196 aaPredicted RBP9.43□□□□□ -0.9
CPSF4-208ENST00000452047 OR2C1O95371 312 aa9.43□□□□□ -0.9
CPSF4-208ENST00000452047 APOA1P02647 267 aa9.43□□□□□ -0.9
CPSF4-208ENST00000452047 SMIM18P0DKX4 95 aa9.43□□□□□ -0.9
CPSF4-208ENST00000452047 HIST1H1BP16401 226 aaKnown RBP9.43□□□□□ -0.9
CPSF4-208ENST00000452047 F2RP25116 425 aa9.43□□□□□ -0.9
CPSF4-208ENST00000452047 HRH1P35367 487 aa9.43□□□□□ -0.9
CPSF4-208ENST00000452047 VBP1P61758 197 aa9.43□□□□□ -0.9
CPSF4-208ENST00000452047 CNPY1Q3B7I2 92 aa9.43□□□□□ -0.9
CPSF4-208ENST00000452047 CD300EQ496F6 205 aaPredicted RBP9.43□□□□□ -0.9
CPSF4-208ENST00000452047 CLEC19AQ6UXS0 136 aa9.43□□□□□ -0.9
CPSF4-208ENST00000452047 GTSCR1Q86UQ5 136 aa9.43□□□□□ -0.9
CPSF4-208ENST00000452047 GPHB5Q86YW7 130 aa9.43□□□□□ -0.9
CPSF4-208ENST00000452047 DMBX1Q8NFW5 382 aa9.43□□□□□ -0.9
CPSF4-208ENST00000452047 MUC7Q8TAX7 377 aa9.43□□□□□ -0.9
CPSF4-208ENST00000452047 DGCR14Q96DF8 476 aaKnown RBP9.43□□□□□ -0.9
CPSF4-208ENST00000452047 CMTM3Q96MX0 182 aa9.43□□□□□ -0.9
CPSF4-208ENST00000452047 SRSF8Q9BRL6 282 aaKnown RBP9.43□□□□□ -0.9
CPSF4-208ENST00000452047 QTRT1Q9BXR0 403 aaKnown RBP9.43□□□□□ -0.9
CPSF4-208ENST00000452047 ZC4H2Q9NQZ6 224 aa9.43□□□□□ -0.9
CPSF4-208ENST00000452047 COMMD3Q9UBI1 195 aa9.43□□□□□ -0.9
CPSF4-208ENST00000452047 MARCH11A6NNE9 402 aa9.42□□□□□ -0.9
CPSF4-208ENST00000452047 ZNF785A8K8V0 405 aa9.42□□□□□ -0.9
CPSF4-208ENST00000452047 A8MWP6 167 aa9.42□□□□□ -0.9
CPSF4-208ENST00000452047 DEFA4P12838 97 aa9.42□□□□□ -0.9
CPSF4-208ENST00000452047 FOLR2P14207 255 aa9.42□□□□□ -0.9
CPSF4-208ENST00000452047 RPA2P15927 270 aa9.42□□□□□ -0.9
CPSF4-208ENST00000452047 HLA-DMAP28067 261 aa9.42□□□□□ -0.9
CPSF4-208ENST00000452047 ARL3P36405 182 aa9.42□□□□□ -0.9
CPSF4-208ENST00000452047 DEFB114Q30KQ6 69 aa9.42□□□□□ -0.9
CPSF4-208ENST00000452047 ZNF585BQ52M93 769 aa9.42□□□□□ -0.9
CPSF4-208ENST00000452047 LAX1Q8IWV1 398 aa9.42□□□□□ -0.9
CPSF4-208ENST00000452047 CADM3Q8N126 398 aa9.42□□□□□ -0.9
CPSF4-208ENST00000452047 OR10W1Q8NGF6 305 aa9.42□□□□□ -0.9
CPSF4-208ENST00000452047 OR6F1Q8NGZ6 308 aa9.42□□□□□ -0.9
CPSF4-208ENST00000452047 FCAMRQ8WWV6 532 aa9.42□□□□□ -0.9
CPSF4-208ENST00000452047 EEF1AKMT3Q96AZ1 226 aa9.42□□□□□ -0.9
CPSF4-208ENST00000452047 CITED4Q96RK1 184 aa9.42□□□□□ -0.9
CPSF4-208ENST00000452047 COMMD5Q9GZQ3 224 aa9.42□□□□□ -0.9
CPSF4-208ENST00000452047 PTTG2Q9NZH5 202 aa9.42□□□□□ -0.9
CPSF4-208ENST00000452047 LYSTQ99698 3801 aa9.41□□□□□ -0.9
CPSF4-208ENST00000452047 STARD9Q9P2P6 4700 aa9.41□□□□□ -0.9
CPSF4-208ENST00000452047 TRBV7-1A0A0A6YYK4 115 aa9.41□□□□□ -0.9
CPSF4-208ENST00000452047 TMEM213A2RRL7 107 aa9.41□□□□□ -0.9
CPSF4-208ENST00000452047 GPR31O00270 319 aa9.41□□□□□ -0.9
CPSF4-208ENST00000452047 ELK1P19419 428 aa9.41□□□□□ -0.9
CPSF4-208ENST00000452047 WT1-ASQ06250 92 aa9.41□□□□□ -0.9
CPSF4-208ENST00000452047 HAGHQ16775 308 aa9.41□□□□□ -0.9
CPSF4-208ENST00000452047 THOC7Q6I9Y2 204 aaKnown RBP9.41□□□□□ -0.9
CPSF4-208ENST00000452047 CMTM1Q8IZ96 169 aa9.41□□□□□ -0.9
CPSF4-208ENST00000452047 GDPD1Q8N9F7 314 aa9.41□□□□□ -0.9
CPSF4-208ENST00000452047 ZNF502Q8TBZ5 544 aa9.41□□□□□ -0.9
CPSF4-208ENST00000452047 DYNLRB2Q8TF09 96 aa9.41□□□□□ -0.9
CPSF4-208ENST00000452047 CACNG8Q8WXS5 425 aa9.41□□□□□ -0.9
CPSF4-208ENST00000452047 CXorf58Q96LI9 332 aa9.41□□□□□ -0.9
CPSF4-208ENST00000452047 SCPEP1Q9HB40 452 aa9.41□□□□□ -0.9
CPSF4-208ENST00000452047 TENM2Q9NT68 2774 aa9.41□□□□□ -0.9
CPSF4-208ENST00000452047 TEX50A0A1B0GTY4 177 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms