RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 PHB2Q99623 299 aa7□□□□□ -1.29
COL8A1-203ENST00000452013 CITED2Q99967 270 aaPredicted RBP7□□□□□ -1.29
COL8A1-203ENST00000452013 HSPB9Q9BQS6 159 aa7□□□□□ -1.29
COL8A1-203ENST00000452013 IGHV7-81A0A0B4J1V7 117 aa6.99□□□□□ -1.29
COL8A1-203ENST00000452013 TRAV41A0A0B4J266 112 aa6.99□□□□□ -1.29
COL8A1-203ENST00000452013 I3L521 148 aa6.99□□□□□ -1.29
COL8A1-203ENST00000452013 GPR31O00270 319 aa6.99□□□□□ -1.29
COL8A1-203ENST00000452013 GOSR2O14653 212 aa6.99□□□□□ -1.29
COL8A1-203ENST00000452013 TNFSF12O43508 249 aa6.99□□□□□ -1.29
COL8A1-203ENST00000452013 PGLYRP1O75594 196 aaPredicted RBP6.99□□□□□ -1.29
COL8A1-203ENST00000452013 CNIH1O95406 144 aa6.99□□□□□ -1.29
COL8A1-203ENST00000452013 HRASP01112 189 aa6.99□□□□□ -1.29
COL8A1-203ENST00000452013 CRYGBP07316 175 aa6.99□□□□□ -1.29
COL8A1-203ENST00000452013 ELANEP08246 267 aa6.99□□□□□ -1.29
COL8A1-203ENST00000452013 ZNF735P0CB33 412 aa6.99□□□□□ -1.29
COL8A1-203ENST00000452013 CXCL2P19875 107 aa6.99□□□□□ -1.29
COL8A1-203ENST00000452013 UCP3P55916 312 aa6.99□□□□□ -1.29
COL8A1-203ENST00000452013 EIF4EBP1Q13541 118 aaPredicted RBP6.99□□□□□ -1.29
COL8A1-203ENST00000452013 SURF2Q15527 256 aaPredicted RBP6.99□□□□□ -1.29
COL8A1-203ENST00000452013 CXorf66Q5JRM2 361 aaPredicted RBP6.99□□□□□ -1.29
COL8A1-203ENST00000452013 TREML4Q6UXN2 200 aa6.99□□□□□ -1.29
COL8A1-203ENST00000452013 ZNF818PQ6ZRF7 136 aa6.99□□□□□ -1.29
COL8A1-203ENST00000452013 SPAG16Q8N0X2 631 aa6.99□□□□□ -1.29
COL8A1-203ENST00000452013 KCNRGQ8N5I3 272 aa6.99□□□□□ -1.29
COL8A1-203ENST00000452013 TCTEX1D1Q8N7M0 179 aa6.99□□□□□ -1.29
COL8A1-203ENST00000452013 OR4F17Q8NGA8 305 aa6.99□□□□□ -1.29
COL8A1-203ENST00000452013 VSTM2AQ8TAG5 236 aa6.99□□□□□ -1.29
COL8A1-203ENST00000452013 ABHD5Q8WTS1 349 aa6.99□□□□□ -1.29
COL8A1-203ENST00000452013 MITD1Q8WV92 249 aa6.99□□□□□ -1.29
COL8A1-203ENST00000452013 OR4F4Q96R69 305 aa6.99□□□□□ -1.29
COL8A1-203ENST00000452013 MFFQ9GZY8 342 aa6.99□□□□□ -1.29
COL8A1-203ENST00000452013 ARL6Q9H0F7 186 aa6.99□□□□□ -1.29
COL8A1-203ENST00000452013 PARP11Q9NR21 331 aa6.99□□□□□ -1.29
COL8A1-203ENST00000452013 WSB1Q9Y6I7 421 aa6.99□□□□□ -1.29
COL8A1-203ENST00000452013 KANTRA0A1W2PQU2 76 aa6.98□□□□□ -1.29
COL8A1-203ENST00000452013 MFSD2BA6NFX1 497 aa6.98□□□□□ -1.29
COL8A1-203ENST00000452013 SRRM4A7MD48 611 aaKnown RBP6.98□□□□□ -1.29
COL8A1-203ENST00000452013 M0QYG6 137 aa6.98□□□□□ -1.29
COL8A1-203ENST00000452013 ATP6V0E1O15342 81 aa6.98□□□□□ -1.29
COL8A1-203ENST00000452013 ARPC5O15511 151 aa6.98□□□□□ -1.29
COL8A1-203ENST00000452013 RBFOX2O43251 390 aaKnown RBP eCLIP6.98□□□□□ -1.29
COL8A1-203ENST00000452013 ACTL6BO94805 426 aa6.98□□□□□ -1.29
COL8A1-203ENST00000452013 DUS4LO95620 317 aaKnown RBP6.98□□□□□ -1.29
COL8A1-203ENST00000452013 HPRT1P00492 218 aa6.98□□□□□ -1.29
COL8A1-203ENST00000452013 CA2P00918 260 aa6.98□□□□□ -1.29
COL8A1-203ENST00000452013 IGLV2-23P01705 113 aa6.98□□□□□ -1.29
COL8A1-203ENST00000452013 IGHG4P01861 327 aa6.98□□□□□ -1.29
COL8A1-203ENST00000452013 PET100P0DJ07 73 aa6.98□□□□□ -1.29
COL8A1-203ENST00000452013 H2BFSP57053 126 aa6.98□□□□□ -1.29
COL8A1-203ENST00000452013 EIF5AP63241 154 aaKnown RBP6.98□□□□□ -1.29
COL8A1-203ENST00000452013 DHRS2Q13268 280 aa6.98□□□□□ -1.29
COL8A1-203ENST00000452013 FOXE3Q13461 319 aa6.98□□□□□ -1.29
COL8A1-203ENST00000452013 FXYD3Q14802 87 aa6.98□□□□□ -1.29
COL8A1-203ENST00000452013 AKIRIN2Q53H80 203 aa6.98□□□□□ -1.29
COL8A1-203ENST00000452013 OR2B11Q5JQS5 317 aa6.98□□□□□ -1.29
COL8A1-203ENST00000452013 TCTEX1D4Q5JR98 221 aa6.98□□□□□ -1.29
COL8A1-203ENST00000452013 KHDC1LQ5JSQ8 128 aa6.98□□□□□ -1.29
COL8A1-203ENST00000452013 AADACL3Q5VUY0 350 aa6.98□□□□□ -1.29
COL8A1-203ENST00000452013 C11orf87Q6NUJ2 197 aa6.98□□□□□ -1.29
COL8A1-203ENST00000452013 UQCC3Q6UW78 93 aa6.98□□□□□ -1.29
COL8A1-203ENST00000452013 ACOT7LQ6ZUV0 252 aa6.98□□□□□ -1.29
COL8A1-203ENST00000452013 SLC38A6Q8IZM9 456 aa6.98□□□□□ -1.29
COL8A1-203ENST00000452013 TERB2Q8NHR7 220 aa6.98□□□□□ -1.29
COL8A1-203ENST00000452013 FAM110DQ8TAY7 271 aaPredicted RBP6.98□□□□□ -1.29
COL8A1-203ENST00000452013 R3HDM4Q96D70 268 aa6.98□□□□□ -1.29
COL8A1-203ENST00000452013 TMEM68Q96MH6 324 aa6.98□□□□□ -1.29
COL8A1-203ENST00000452013 NMES1Q9C002 83 aa6.98□□□□□ -1.29
COL8A1-203ENST00000452013 TINAGL1Q9GZM7 467 aaPredicted RBP6.98□□□□□ -1.29
COL8A1-203ENST00000452013 FXYD6-FXYD2A0A087WZ82 144 aa6.97□□□□□ -1.29
COL8A1-203ENST00000452013 TEX46H3BTG2 121 aa6.97□□□□□ -1.29
COL8A1-203ENST00000452013 HLA-AP01891 365 aaKnown RBP6.97□□□□□ -1.29
COL8A1-203ENST00000452013 PF4V1P10720 104 aa6.97□□□□□ -1.29
COL8A1-203ENST00000452013 PGAM2P15259 253 aa6.97□□□□□ -1.29
COL8A1-203ENST00000452013 F2RP25116 425 aa6.97□□□□□ -1.29
COL8A1-203ENST00000452013 PPIFP30405 207 aaKnown RBP6.97□□□□□ -1.29
COL8A1-203ENST00000452013 CRIP2P52943 208 aaPredicted RBP6.97□□□□□ -1.29
COL8A1-203ENST00000452013 GNB1P62873 340 aa6.97□□□□□ -1.29
COL8A1-203ENST00000452013 CFHR3Q02985 330 aa6.97□□□□□ -1.29
COL8A1-203ENST00000452013 PRSS8Q16651 343 aa6.97□□□□□ -1.29
COL8A1-203ENST00000452013 TMEM128Q5BJH2 165 aa6.97□□□□□ -1.29
COL8A1-203ENST00000452013 FAAP20Q6NZ36 180 aa6.97□□□□□ -1.29
COL8A1-203ENST00000452013 UNQ5815/PRO19632Q6UWF5 114 aa6.97□□□□□ -1.29
COL8A1-203ENST00000452013 C10orf99Q6UWK7 81 aa6.97□□□□□ -1.29
COL8A1-203ENST00000452013 ZNF546Q86UE3 836 aa6.97□□□□□ -1.29
COL8A1-203ENST00000452013 MMD2Q8IY49 270 aa6.97□□□□□ -1.29
COL8A1-203ENST00000452013 INO80EQ8NBZ0 244 aaPredicted RBP6.97□□□□□ -1.29
COL8A1-203ENST00000452013 OR13C8Q8NGS7 320 aa6.97□□□□□ -1.29
COL8A1-203ENST00000452013 OR51H1Q8NH63 302 aa6.97□□□□□ -1.29
COL8A1-203ENST00000452013 THAP6Q8TBB0 222 aa6.97□□□□□ -1.29
COL8A1-203ENST00000452013 ARPC1AQ92747 370 aa6.97□□□□□ -1.29
COL8A1-203ENST00000452013 GPHA2Q96T91 129 aa6.97□□□□□ -1.29
COL8A1-203ENST00000452013 RSRP1Q9BUV0 290 aa6.97□□□□□ -1.29
COL8A1-203ENST00000452013 FXYD6Q9H0Q3 95 aa6.97□□□□□ -1.29
COL8A1-203ENST00000452013 PLEKHA2Q9HB19 425 aa6.97□□□□□ -1.29
COL8A1-203ENST00000452013 TNFSF18Q9UNG2 199 aa6.97□□□□□ -1.29
COL8A1-203ENST00000452013 DSCAML1Q8TD84 2053 aa6.97□□□□□ -1.29
COL8A1-203ENST00000452013 A0A1W2PRX2 142 aa6.96□□□□□ -1.3
COL8A1-203ENST00000452013 C9orf170A2RU37 121 aa6.96□□□□□ -1.3
COL8A1-203ENST00000452013 G3V318 75 aa6.96□□□□□ -1.3
COL8A1-203ENST00000452013 BCL2L11O43521 198 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms