RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 COMPP49747 757 aaPredicted RBP11.59□□□□□ -0.55
SHANK2-210ENST00000449116 RRAS2P62070 204 aaPredicted RBP11.59□□□□□ -0.55
SHANK2-210ENST00000449116 CX3CL1P78423 397 aa11.59□□□□□ -0.55
SHANK2-210ENST00000449116 SSBP2P81877 361 aaPredicted RBP11.59□□□□□ -0.55
SHANK2-210ENST00000449116 IAH1Q2TAA2 248 aaPredicted RBP11.59□□□□□ -0.55
SHANK2-210ENST00000449116 GSG1LQ6UXU4 331 aa11.59□□□□□ -0.55
SHANK2-210ENST00000449116 OR1S1Q8NH92 325 aa11.59□□□□□ -0.55
SHANK2-210ENST00000449116 OR10C1Q96KK4 312 aa11.59□□□□□ -0.55
SHANK2-210ENST00000449116 HSPB9Q9BQS6 159 aa11.59□□□□□ -0.55
SHANK2-210ENST00000449116 QTRT1Q9BXR0 403 aaKnown RBP11.59□□□□□ -0.55
SHANK2-210ENST00000449116 PRSS22Q9GZN4 317 aa11.59□□□□□ -0.55
SHANK2-210ENST00000449116 COMMD5Q9GZQ3 224 aa11.59□□□□□ -0.55
SHANK2-210ENST00000449116 TMEM14BQ9NUH8 114 aa11.59□□□□□ -0.55
SHANK2-210ENST00000449116 MGAT4CQ9UBM8 478 aa11.59□□□□□ -0.55
SHANK2-210ENST00000449116 OR51B2Q9Y5P1 312 aa11.59□□□□□ -0.55
SHANK2-210ENST00000449116 KCNAB3O43448 404 aa11.58□□□□□ -0.56
SHANK2-210ENST00000449116 PITX3O75364 302 aa11.58□□□□□ -0.56
SHANK2-210ENST00000449116 IGHG2P01859 326 aa11.58□□□□□ -0.56
SHANK2-210ENST00000449116 MYOD1P15172 320 aa11.58□□□□□ -0.56
SHANK2-210ENST00000449116 FXYD3Q14802 87 aa11.58□□□□□ -0.56
SHANK2-210ENST00000449116 FCN2Q15485 313 aa11.58□□□□□ -0.56
SHANK2-210ENST00000449116 AARDQ4LEZ3 155 aa11.58□□□□□ -0.56
SHANK2-210ENST00000449116 OR5B3Q8NH48 314 aa11.58□□□□□ -0.56
SHANK2-210ENST00000449116 ARPC1AQ92747 370 aa11.58□□□□□ -0.56
SHANK2-210ENST00000449116 PDCD10Q9BUL8 212 aa11.58□□□□□ -0.56
SHANK2-210ENST00000449116 ZNF257Q9Y2Q1 563 aa11.58□□□□□ -0.56
SHANK2-210ENST00000449116 TEX50A0A1B0GTY4 177 aa11.57□□□□□ -0.56
SHANK2-210ENST00000449116 ST8SIA3O43173 380 aa11.57□□□□□ -0.56
SHANK2-210ENST00000449116 SIX6O95475 246 aa11.57□□□□□ -0.56
SHANK2-210ENST00000449116 OPN1MWP04001 364 aa11.57□□□□□ -0.56
SHANK2-210ENST00000449116 OPN1MW2P0DN77 364 aa11.57□□□□□ -0.56
SHANK2-210ENST00000449116 OPN1MW3P0DN78 364 aa11.57□□□□□ -0.56
SHANK2-210ENST00000449116 RPL27AP46776 148 aaKnown RBP11.57□□□□□ -0.56
SHANK2-210ENST00000449116 HSPE1P61604 102 aaKnown RBP11.57□□□□□ -0.56
SHANK2-210ENST00000449116 NDPQ00604 133 aa11.57□□□□□ -0.56
SHANK2-210ENST00000449116 C10orf55Q5SWW7 151 aa11.57□□□□□ -0.56
SHANK2-210ENST00000449116 Q6ZS46 218 aa11.57□□□□□ -0.56
SHANK2-210ENST00000449116 SLC35E3Q7Z769 313 aa11.57□□□□□ -0.56
SHANK2-210ENST00000449116 ZBTB8BQ8NAP8 495 aaPredicted RBP11.57□□□□□ -0.56
SHANK2-210ENST00000449116 OR4D5Q8NGN0 318 aa11.57□□□□□ -0.56
SHANK2-210ENST00000449116 OR1L8Q8NGR8 309 aa11.57□□□□□ -0.56
SHANK2-210ENST00000449116 OR52E5Q8NH55 327 aa11.57□□□□□ -0.56
SHANK2-210ENST00000449116 SRSF12Q8WXF0 261 aaKnown RBP11.57□□□□□ -0.56
SHANK2-210ENST00000449116 C2orf50Q96LR7 162 aa11.57□□□□□ -0.56
SHANK2-210ENST00000449116 ZNF702PQ9H963 129 aa11.57□□□□□ -0.56
SHANK2-210ENST00000449116 CACFD1Q9UGQ2 172 aa11.57□□□□□ -0.56
SHANK2-210ENST00000449116 TNCP24821 2201 aa11.56□□□□□ -0.56
SHANK2-210ENST00000449116 TSPAN9O75954 239 aa11.56□□□□□ -0.56
SHANK2-210ENST00000449116 IFNA17P01571 189 aa11.56□□□□□ -0.56
SHANK2-210ENST00000449116 CXCL3P19876 107 aa11.56□□□□□ -0.56
SHANK2-210ENST00000449116 H2BFSP57053 126 aa11.56□□□□□ -0.56
SHANK2-210ENST00000449116 PDLIM3Q53GG5 364 aaPredicted RBP11.56□□□□□ -0.56
SHANK2-210ENST00000449116 Q6ZSV7 163 aa11.56□□□□□ -0.56
SHANK2-210ENST00000449116 Q8N2B8 174 aa11.56□□□□□ -0.56
SHANK2-210ENST00000449116 OR11H7Q8NGC8 314 aa11.56□□□□□ -0.56
SHANK2-210ENST00000449116 GRPEL2Q8TAA5 225 aa11.56□□□□□ -0.56
SHANK2-210ENST00000449116 ABHD5Q8WTS1 349 aa11.56□□□□□ -0.56
SHANK2-210ENST00000449116 PARP11Q9NR21 331 aa11.56□□□□□ -0.56
SHANK2-210ENST00000449116 NDUFA4L2Q9NRX3 87 aa11.56□□□□□ -0.56
SHANK2-210ENST00000449116 GSKIPQ9P0R6 139 aa11.56□□□□□ -0.56
SHANK2-210ENST00000449116 HSPB7Q9UBY9 170 aa11.56□□□□□ -0.56
SHANK2-210ENST00000449116 hCG_2014768A0A024R1R8 64 aa11.55□□□□□ -0.56
SHANK2-210ENST00000449116 HMX3A6NHT5 357 aa11.55□□□□□ -0.56
SHANK2-210ENST00000449116 LINC01548A6NM66 108 aa11.55□□□□□ -0.56
SHANK2-210ENST00000449116 FAM90A26D6RGX4 464 aa11.55□□□□□ -0.56
SHANK2-210ENST00000449116 E7EUB6 86 aa11.55□□□□□ -0.56
SHANK2-210ENST00000449116 ATP6V0E1O15342 81 aa11.55□□□□□ -0.56
SHANK2-210ENST00000449116 NXPH3O95157 252 aa11.55□□□□□ -0.56
SHANK2-210ENST00000449116 TRAPPC2P0DI81 140 aa11.55□□□□□ -0.56
SHANK2-210ENST00000449116 TRAPPC2BP0DI82 140 aa11.55□□□□□ -0.56
SHANK2-210ENST00000449116 SPCS3P61009 180 aa11.55□□□□□ -0.56
SHANK2-210ENST00000449116 CYCSP99999 105 aaKnown RBP11.55□□□□□ -0.56
SHANK2-210ENST00000449116 PRCDQ00LT1 54 aa11.55□□□□□ -0.56
SHANK2-210ENST00000449116 SRSF2Q01130 221 aaKnown RBP11.55□□□□□ -0.56
SHANK2-210ENST00000449116 ARSJQ5FYB0 599 aaPredicted RBP11.55□□□□□ -0.56
SHANK2-210ENST00000449116 SGMS2Q8NHU3 365 aa11.55□□□□□ -0.56
SHANK2-210ENST00000449116 FYTTD1Q96QD9 318 aaKnown RBP11.55□□□□□ -0.56
SHANK2-210ENST00000449116 FAM103A1Q9BTL3 118 aaKnown RBP11.55□□□□□ -0.56
SHANK2-210ENST00000449116 HINT2Q9BX68 163 aa11.55□□□□□ -0.56
SHANK2-210ENST00000449116 NMES1Q9C002 83 aa11.55□□□□□ -0.56
SHANK2-210ENST00000449116 A0A1B0GVG6 124 aa11.54□□□□□ -0.56
SHANK2-210ENST00000449116 A0A1B0GW64 132 aa11.54□□□□□ -0.56
SHANK2-210ENST00000449116 MSGN1A6NI15 193 aa11.54□□□□□ -0.56
SHANK2-210ENST00000449116 CGB1A6NKQ9 187 aa11.54□□□□□ -0.56
SHANK2-210ENST00000449116 TEX22C9J3V5 150 aa11.54□□□□□ -0.56
SHANK2-210ENST00000449116 AP4M1O00189 453 aa11.54□□□□□ -0.56
SHANK2-210ENST00000449116 NDUFA7O95182 113 aa11.54□□□□□ -0.56
SHANK2-210ENST00000449116 SCGB1D2O95969 90 aa11.54□□□□□ -0.56
SHANK2-210ENST00000449116 IGF1P05019 195 aa11.54□□□□□ -0.56
SHANK2-210ENST00000449116 EGR2P11161 476 aaPredicted RBP11.54□□□□□ -0.56
SHANK2-210ENST00000449116 NKX2-1P43699 371 aaPredicted RBP11.54□□□□□ -0.56
SHANK2-210ENST00000449116 VDAC2P45880 294 aaPredicted RBP11.54□□□□□ -0.56
SHANK2-210ENST00000449116 ID3Q02535 119 aa11.54□□□□□ -0.56
SHANK2-210ENST00000449116 TNFRSF9Q07011 255 aa11.54□□□□□ -0.56
SHANK2-210ENST00000449116 CXorf66Q5JRM2 361 aaPredicted RBP11.54□□□□□ -0.56
SHANK2-210ENST00000449116 OR2T6Q8NHC8 308 aa11.54□□□□□ -0.56
SHANK2-210ENST00000449116 SRSF8Q9BRL6 282 aaKnown RBP11.54□□□□□ -0.56
SHANK2-210ENST00000449116 ZNF436Q9C0F3 470 aaPredicted RBP11.54□□□□□ -0.56
SHANK2-210ENST00000449116 PLEKHA3Q9HB20 300 aa11.54□□□□□ -0.56
SHANK2-210ENST00000449116 ZNF580Q9UK33 172 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms