RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 OR1L1Q8NH94 360 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 SPATA3Q8NHX4 192 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 NABP1Q96AH0 204 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 TMPRSS13Q9BYE2 586 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 FBXL15Q9H469 300 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 SIGLEC8Q9NYZ4 499 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 CTDSP2O14595 271 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 SEC11BP0C7V7 166 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 GPR183P32249 361 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 CFHR2P36980 270 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 FLI1Q01543 452 aaPredicted RBP4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 SSX1Q16384 188 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 IAH1Q2TAA2 248 aaPredicted RBP4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 ERASQ7Z444 233 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 FAM24BQ8N5W8 94 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 BVESQ8NE79 360 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 ORAI1Q96D31 301 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 TANC2Q9HCD6 1990 aa4.67□□□□□ -1.66
CDC42BPA-209ENST00000448940 FXYD6-FXYD2A0A087WZ82 144 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 SC5DO75845 299 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 HILS1P60008 231 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 SPANXN5Q5MJ07 72 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 FAM213BQ8TBF2 198 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 RHOVQ96L33 236 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 WNT10AQ9GZT5 417 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 FXYD6Q9H0Q3 95 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 AKIP1Q9NQ31 210 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 ANKRD17O75179 2603 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 TRAV6A0A075B6T7 132 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 CLEC18AA5D8T8 446 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 TAS2R30P59541 319 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 C8orf86Q6ZUL3 223 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 OR10P1Q8NGE3 313 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 RBMXL1Q96E39 390 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 ADAT3Q96EY9 351 aaPredicted RBP4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 TMPRSS5Q9H3S3 457 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 ACANP16112 2415 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 TCRBV5S2A0A599 114 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 C5orf52A6NGY3 159 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 J3QR06 171 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 DEFB130BP0DP73 79 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 DEFB130AP0DP74 79 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 IGLL1P15814 213 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 RPL8P62917 257 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 PAQR4Q8N4S7 273 aaPredicted RBP4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 SYT8Q8NBV8 401 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 COPS9Q8WXC6 57 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 PRR25Q96S07 402 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 SLC31A2O15432 143 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 NBR2O15453 112 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 SYNJ2BPP57105 145 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 TAS2R45P59539 299 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 TMEM268Q5VZI3 342 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 PIFOQ8TCI5 191 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 TXNL4BQ9NX01 149 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 CHST2Q9Y4C5 530 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 CORTO00230 105 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 TSPAN13O95857 204 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 IGHV2-5P01817 119 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 HLA-AP01891 365 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 ODF1Q14990 250 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 OR10J3Q5JRS4 329 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 SLC35E4Q6ICL7 350 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 LINC00469Q8N7U9 141 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 IFT22Q9H7X7 185 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 NIT2Q9NQR4 276 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 ARHGAP32A7KAX9 2087 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 A0A087WX48 190 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 INMT-MINDY4F8WBC2 141 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 OGG1O15527 345 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 GGCTO75223 188 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 H2AFB2P0C5Z0 115 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 RAB6AP20340 208 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 MST1LQ2TV78 715 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 GLDNQ6ZMI3 551 aaPredicted RBP4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 TMUB2Q71RG4 321 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 C10orf126Q8N4M7 172 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 TTC9CQ8N5M4 171 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 DYNC2LI1Q8TCX1 351 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 PLCXD1Q9NUJ7 323 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 KLK11Q9UBX7 282 aa4.66□□□□□ -1.66
CDC42BPA-209ENST00000448940 A0A1B0GV50 99 aa4.65□□□□□ -1.66
CDC42BPA-209ENST00000448940 TMEM82A0PJX8 343 aa4.65□□□□□ -1.66
CDC42BPA-209ENST00000448940 VPREB1P12018 145 aa4.65□□□□□ -1.66
CDC42BPA-209ENST00000448940 NKX2-1P43699 371 aaPredicted RBP4.65□□□□□ -1.66
CDC42BPA-209ENST00000448940 CRYBA2P53672 197 aa4.65□□□□□ -1.66
CDC42BPA-209ENST00000448940 HIST3H3Q16695 136 aa4.65□□□□□ -1.66
CDC42BPA-209ENST00000448940 NEU1Q99519 415 aa4.65□□□□□ -1.66
CDC42BPA-209ENST00000448940 SPATA25Q9BR10 227 aa4.65□□□□□ -1.66
CDC42BPA-209ENST00000448940 S4R3C0 116 aa4.65□□□□□ -1.66
CDC42BPA-209ENST00000448940 M0R2N4 97 aa4.65□□□□□ -1.66
CDC42BPA-209ENST00000448940 CGAP01215 116 aa4.65□□□□□ -1.66
CDC42BPA-209ENST00000448940 RPLP1P05386 114 aaKnown RBP4.65□□□□□ -1.66
CDC42BPA-209ENST00000448940 PRR27Q6MZM9 219 aa4.65□□□□□ -1.66
CDC42BPA-209ENST00000448940 C20orf85Q9H1P6 137 aa4.65□□□□□ -1.66
CDC42BPA-209ENST00000448940 RNF167Q9H6Y7 350 aa4.65□□□□□ -1.66
CDC42BPA-209ENST00000448940 LBHQ53QV2 105 aaPredicted RBP4.65□□□□□ -1.66
CDC42BPA-209ENST00000448940 FBLN7Q53RD9 439 aa4.65□□□□□ -1.66
CDC42BPA-209ENST00000448940 SPINK9Q5DT21 86 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms