RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 RFESDQ8TAC1 157 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 NOTCH4Q99466 2003 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 MYO18BQ8IUG5 2567 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 A0A0G2JLM5 398 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 MPDU1O75352 247 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 CTRLP40313 264 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 TMEM196Q5HYL7 178 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 SPATA46Q5T0L3 261 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 PRAMEF5Q5TYX0 476 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 PRAMEF6Q5VXH4 476 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 NEURL1O76050 574 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 LINC00271P0C7V0 271 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 SSR4P51571 173 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 C9orf135Q5VTT2 229 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 ZNF257Q9Y2Q1 563 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 BDP1A6H8Y1 2624 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 A0A0G2JRQ6 117 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 hDV102S1A0JD36 115 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 NPIPB11E5RHQ5 1161 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 RHOGP84095 191 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 DOLPP1Q86YN1 238 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 SFXN3Q9BWM7 321 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 PRRG4Q9BZD6 226 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 WDR54Q9H977 334 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 KIAA1671Q9BY89 1806 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 TNXAQ16473 311 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 TP53TG3Q9ULZ0 132 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 C9orf118A6NHY6 69 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 GALR2O43603 387 aaPredicted RBP4.22□□□□□ -1.73
HERC1-201ENST00000443617 DUSP13Q9UII6 198 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 CRYGSP22914 178 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 LINC00310P59036 64 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 OR10W1Q8NGF6 305 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 EAF1Q96JC9 268 aaPredicted RBP4.22□□□□□ -1.73
HERC1-201ENST00000443617 PGLYRP4Q96LB8 373 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 NAV3Q8IVL0 2385 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 CACNA1AO00555 2505 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 C9JCJ5 164 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 SYS1-DBNDD2H3BUS1 97 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 FRMD6-AS1P0C7T7 363 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 CEACAM16Q2WEN9 425 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 ZNF488Q96MN9 340 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 TRGV10A0A0A0MS01 117 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 hCG_38984A0A1B0GV85 526 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 H3BUT2 72 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 SRD5A2P31213 254 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 RPL8P62917 257 aaKnown RBP4.22□□□□□ -1.73
HERC1-201ENST00000443617 COMMD5Q9GZQ3 224 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 SPCS1Q9Y6A9 102 aa4.22□□□□□ -1.73
HERC1-201ENST00000443617 OR2T8A6NH00 312 aa4.21□□□□□ -1.73
HERC1-201ENST00000443617 M0R296 226 aa4.21□□□□□ -1.73
HERC1-201ENST00000443617 IGLL1P15814 213 aa4.21□□□□□ -1.73
HERC1-201ENST00000443617 HIST1H1AQ02539 215 aaPredicted RBP4.21□□□□□ -1.73
HERC1-201ENST00000443617 KLF5Q13887 457 aaPredicted RBP4.21□□□□□ -1.73
HERC1-201ENST00000443617 OR2M7Q8NG81 312 aa4.21□□□□□ -1.73
HERC1-201ENST00000443617 MS4A6AQ9H2W1 248 aa4.21□□□□□ -1.73
HERC1-201ENST00000443617 V9GYV3 84 aa4.21□□□□□ -1.73
HERC1-201ENST00000443617 A1L4Q6 167 aa4.21□□□□□ -1.73
HERC1-201ENST00000443617 TMEM136Q6ZRR5 245 aa4.21□□□□□ -1.73
HERC1-201ENST00000443617 WFDC8Q8IUA0 241 aa4.21□□□□□ -1.73
HERC1-201ENST00000443617 ADTRPQ96IZ2 230 aa4.21□□□□□ -1.73
HERC1-201ENST00000443617 OR2V2Q96R30 315 aa4.21□□□□□ -1.73
HERC1-201ENST00000443617 RPP25Q9BUL9 199 aaKnown RBP4.21□□□□□ -1.73
HERC1-201ENST00000443617 PLA2G2FQ9BZM2 168 aa4.21□□□□□ -1.73
HERC1-201ENST00000443617 CRIM1Q9NZV1 1036 aa4.21□□□□□ -1.73
HERC1-201ENST00000443617 MRPL27Q9P0M9 148 aaKnown RBP4.21□□□□□ -1.73
HERC1-201ENST00000443617 MRPL33O75394 65 aaKnown RBP4.21□□□□□ -1.73
HERC1-201ENST00000443617 LEPROTL1O95214 131 aa4.21□□□□□ -1.73
HERC1-201ENST00000443617 KIR2DS2P43631 304 aa4.21□□□□□ -1.73
HERC1-201ENST00000443617 PLGLB1Q02325 96 aa4.21□□□□□ -1.73
HERC1-201ENST00000443617 ZNF718Q3SXZ3 478 aa4.21□□□□□ -1.73
HERC1-201ENST00000443617 BRWD3Q6RI45 1802 aa4.21□□□□□ -1.73
HERC1-201ENST00000443617 HS3ST6Q96QI5 342 aa4.21□□□□□ -1.73
HERC1-201ENST00000443617 MS4A5Q9H3V2 200 aa4.21□□□□□ -1.73
HERC1-201ENST00000443617 IL23AQ9NPF7 189 aa4.21□□□□□ -1.73
HERC1-201ENST00000443617 FGF21Q9NSA1 209 aa4.21□□□□□ -1.73
HERC1-201ENST00000443617 A0A1W2PQF6 199 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 C17orf98A8MV24 154 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 PPIAL4DF5H284 164 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 CKS1BP61024 79 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 SF3B5Q9BWJ5 86 aaKnown RBP4.21□□□□□ -1.74
HERC1-201ENST00000443617 CHRNA10Q9GZZ6 450 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 RNASE7Q9H1E1 156 aaKnown RBP4.21□□□□□ -1.74
HERC1-201ENST00000443617 IGHV3-64DA0A0J9YX35 117 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 LMO7DNF2Z398 122 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 KIR2DL1P43626 348 aaPredicted RBP4.21□□□□□ -1.74
HERC1-201ENST00000443617 LYSMD4Q5XG99 296 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.21□□□□□ -1.74
HERC1-201ENST00000443617 IGLC7A0M8Q6 106 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 ZIC3O60481 467 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 FOXL2P58012 376 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 SPATA31B1PQ5VZV4 182 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 PCSK4Q6UW60 755 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 OR2K2Q8NGT1 345 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 DSCAML1Q8TD84 2053 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 GATA2P23769 480 aaPredicted RBP4.21□□□□□ -1.74
HERC1-201ENST00000443617 KIR3DS1Q14943 382 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 KRTCAP3Q53RY4 240 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 RASL11AQ6T310 242 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 SSBP4Q9BWG4 385 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms