RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 LST1O00453 97 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 TP53I11O14683 189 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 SLC22A1O15245 554 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 GNG7O60262 68 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 GGCTO75223 188 aaKnown RBP3.19□□□□□ -1.9
VPS50-206ENST00000443443 FSTL3O95633 263 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 LTAP01374 205 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 IGHV3-11P01762 117 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 GIG44P09565 113 aaPredicted RBP3.19□□□□□ -1.9
VPS50-206ENST00000443443 SEC11BP0C7V7 166 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 ZNF705DP0CH99 300 aaPredicted RBP3.19□□□□□ -1.9
VPS50-206ENST00000443443 OPRK1P41145 380 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 CCR2P41597 374 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 NMUP48645 174 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 UBE2AP49459 152 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 EVX1P49640 407 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 HBA1P69905 142 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 BIKQ13323 160 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 C2orf83Q53S99 150 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 TMEM69Q5SWH9 247 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 RASL11AQ6T310 242 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 UNQ9165/PRO28630Q6UXU0 137 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 PDZD9Q8IXQ8 264 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 ZNF709Q8N972 641 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 OR8A1Q8NGG7 326 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 C2orf15Q8WU43 125 aaKnown RBP3.19□□□□□ -1.9
VPS50-206ENST00000443443 RAB2BQ8WUD1 216 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 C2orf50Q96LR7 162 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 PPP3R2Q96LZ3 170 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 DERL3Q96Q80 235 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 SPIN2AQ99865 258 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 SPIN2BQ9BPZ2 258 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 ZNF471Q9BX82 626 aaPredicted RBP3.19□□□□□ -1.9
VPS50-206ENST00000443443 LINC00470Q9BZP3 86 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 CA10Q9NS85 328 aa3.19□□□□□ -1.9
VPS50-206ENST00000443443 AMMECR1Q9Y4X0 333 aaPredicted RBP3.19□□□□□ -1.9
VPS50-206ENST00000443443 SETD1AO15047 1707 aaKnown RBP3.19□□□□□ -1.9
VPS50-206ENST00000443443 EIF4G3O43432 1585 aaKnown RBP3.18□□□□□ -1.9
VPS50-206ENST00000443443 UHRF1BP1LA0JNW5 1464 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 IBTKQ9P2D0 1353 aaPredicted RBP3.18□□□□□ -1.9
VPS50-206ENST00000443443 IGLV1-50A0A075B6I6 118 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 IGKV6-21A0A0C4DH24 114 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 LINC00862A6NCI5 91 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 A8MUN3 132 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 F6UZH7 168 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 DPM2O94777 84 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 IGLV2-23P01705 113 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 S100A11P31949 105 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 CXCL5P42830 114 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 FKBP1AP62942 108 aaKnown RBP3.18□□□□□ -1.9
VPS50-206ENST00000443443 FKBP1CQ5VVH2 108 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 LAIR2Q6ISS4 152 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 HRCT1Q6UXD1 115 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 DEFB128Q7Z7B8 93 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 WDR86Q86TI4 376 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 ORMDL3Q8N138 153 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 ZNF664Q8N3J9 261 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 ZNF433Q8N7K0 673 aaPredicted RBP3.18□□□□□ -1.9
VPS50-206ENST00000443443 OR4K5Q8NGD3 323 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 OR51T1Q8NGJ9 327 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 OR10D4PQ8NGN7 298 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 OR5W2Q8NH69 310 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 OR4C6Q8NH72 309 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 TOMM6Q96B49 74 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 AP1S3Q96PC3 154 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 ERMAPQ96PL5 475 aaPredicted RBP3.18□□□□□ -1.9
VPS50-206ENST00000443443 NDFIP1Q9BT67 221 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 RTL8AQ9BWD3 113 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 DEFB126Q9BYW3 111 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 OR8D2Q9GZM6 311 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 FGF23Q9GZV9 251 aaPredicted RBP3.18□□□□□ -1.9
VPS50-206ENST00000443443 ZNF492Q9P255 531 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 NAT8BQ9UHF3 227 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 ZNF230Q9UIE0 474 aaPredicted RBP3.18□□□□□ -1.9
VPS50-206ENST00000443443 PCTPQ9UKL6 214 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 PRDM2Q13029 1718 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 OVOS2A0A0G2JMS6 1433 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 FMN1Q68DA7 1419 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 FGD6Q6ZV73 1430 aa3.18□□□□□ -1.9
VPS50-206ENST00000443443 IGHV3-66A0A0C4DH42 116 aa3.17□□□□□ -1.9
VPS50-206ENST00000443443 KLF18A0A0U1RQI7 1052 aa3.17□□□□□ -1.9
VPS50-206ENST00000443443 C20orf202A1L168 122 aa3.17□□□□□ -1.9
VPS50-206ENST00000443443 FABP5P3A8MUU1 101 aa3.17□□□□□ -1.9
VPS50-206ENST00000443443 OVOL1O14753 267 aa3.17□□□□□ -1.9
VPS50-206ENST00000443443 UBE2L6O14933 153 aa3.17□□□□□ -1.9
VPS50-206ENST00000443443 UCHL1P09936 223 aa3.17□□□□□ -1.9
VPS50-206ENST00000443443 ZNF688P0C7X2 276 aa3.17□□□□□ -1.9
VPS50-206ENST00000443443 IL1RNP18510 177 aa3.17□□□□□ -1.9
VPS50-206ENST00000443443 ELK1P19419 428 aa3.17□□□□□ -1.9
VPS50-206ENST00000443443 DAPP51397 102 aa3.17□□□□□ -1.9
VPS50-206ENST00000443443 AKR1D1P51857 326 aa3.17□□□□□ -1.9
VPS50-206ENST00000443443 ENDOGQ14249 297 aaKnown RBP3.17□□□□□ -1.9
VPS50-206ENST00000443443 DNLZQ5SXM8 178 aa3.17□□□□□ -1.9
VPS50-206ENST00000443443 ZNF721Q8TF20 911 aa3.17□□□□□ -1.9
VPS50-206ENST00000443443 C15orf40Q8WUR7 153 aa3.17□□□□□ -1.9
VPS50-206ENST00000443443 GTSF1Q8WW33 167 aa3.17□□□□□ -1.9
VPS50-206ENST00000443443 RMI2Q96E14 147 aa3.17□□□□□ -1.9
VPS50-206ENST00000443443 BORCS8Q96FH0 119 aa3.17□□□□□ -1.9
VPS50-206ENST00000443443 SLC25A21Q9BQT8 299 aaPredicted RBP3.17□□□□□ -1.9
VPS50-206ENST00000443443 SND1-IT1Q9HBX3 110 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms