RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 RBMXL2O75526 392 aaKnown RBP8.35□□□□□ -1.07
HLA-DMB-259ENST00000438510 IFNA21P01568 189 aa8.35□□□□□ -1.07
HLA-DMB-259ENST00000438510 OR9G9P0C7N8 305 aa8.35□□□□□ -1.07
HLA-DMB-259ENST00000438510 P0C879 139 aa8.35□□□□□ -1.07
HLA-DMB-259ENST00000438510 COMPP49747 757 aaPredicted RBP8.35□□□□□ -1.07
HLA-DMB-259ENST00000438510 CX3CL1P78423 397 aa8.35□□□□□ -1.07
HLA-DMB-259ENST00000438510 PJVKQ0ZLH3 352 aa8.35□□□□□ -1.07
HLA-DMB-259ENST00000438510 FOXL1Q12952 345 aa8.35□□□□□ -1.07
HLA-DMB-259ENST00000438510 FXYD3Q14802 87 aa8.35□□□□□ -1.07
HLA-DMB-259ENST00000438510 THOC7Q6I9Y2 204 aaKnown RBP8.35□□□□□ -1.07
HLA-DMB-259ENST00000438510 LYZL2Q7Z4W2 148 aa8.35□□□□□ -1.07
HLA-DMB-259ENST00000438510 AKAP14Q86UN6 197 aa8.35□□□□□ -1.07
HLA-DMB-259ENST00000438510 C12orf45Q8N5I9 185 aaPredicted RBP8.35□□□□□ -1.07
HLA-DMB-259ENST00000438510 SRSF12Q8WXF0 261 aaKnown RBP8.35□□□□□ -1.07
HLA-DMB-259ENST00000438510 TMEM158Q8WZ71 300 aa8.35□□□□□ -1.07
HLA-DMB-259ENST00000438510 SPIN2AQ99865 258 aa8.35□□□□□ -1.07
HLA-DMB-259ENST00000438510 SPIN2BQ9BPZ2 258 aa8.35□□□□□ -1.07
HLA-DMB-259ENST00000438510 PDCD10Q9BUL8 212 aa8.35□□□□□ -1.07
HLA-DMB-259ENST00000438510 GON7Q9BXV9 100 aa8.35□□□□□ -1.07
HLA-DMB-259ENST00000438510 CACFD1Q9UGQ2 172 aa8.35□□□□□ -1.07
HLA-DMB-259ENST00000438510 ZNF580Q9UK33 172 aa8.35□□□□□ -1.07
HLA-DMB-259ENST00000438510 FOXA2Q9Y261 457 aaPredicted RBP8.35□□□□□ -1.07
HLA-DMB-259ENST00000438510 PLXNB1O43157 2135 aa8.35□□□□□ -1.07
HLA-DMB-259ENST00000438510 TRAV3A0A0B4J244 114 aa8.34□□□□□ -1.07
HLA-DMB-259ENST00000438510 C7orf66A4D0T2 115 aa8.34□□□□□ -1.07
HLA-DMB-259ENST00000438510 ATP6V0E1O15342 81 aa8.34□□□□□ -1.07
HLA-DMB-259ENST00000438510 IGF1P05019 195 aa8.34□□□□□ -1.07
HLA-DMB-259ENST00000438510 HOXB5P09067 269 aa8.34□□□□□ -1.07
HLA-DMB-259ENST00000438510 SULT1A3P0DMM9 295 aa8.34□□□□□ -1.07
HLA-DMB-259ENST00000438510 SULT1A4P0DMN0 295 aa8.34□□□□□ -1.07
HLA-DMB-259ENST00000438510 RPL27AP46776 148 aaKnown RBP8.34□□□□□ -1.07
HLA-DMB-259ENST00000438510 OR2B8PP59922 312 aa8.34□□□□□ -1.07
HLA-DMB-259ENST00000438510 NDPQ00604 133 aa8.34□□□□□ -1.07
HLA-DMB-259ENST00000438510 TMEM267Q0VDI3 215 aaPredicted RBP8.34□□□□□ -1.07
HLA-DMB-259ENST00000438510 TATDN3Q17R31 274 aa8.34□□□□□ -1.07
HLA-DMB-259ENST00000438510 MRGPRG-AS1Q2M3A8 158 aa8.34□□□□□ -1.07
HLA-DMB-259ENST00000438510 KRTAP24-1Q3LI83 254 aa8.34□□□□□ -1.07
HLA-DMB-259ENST00000438510 NMSQ5H8A3 153 aa8.34□□□□□ -1.07
HLA-DMB-259ENST00000438510 Q6ZS46 218 aa8.34□□□□□ -1.07
HLA-DMB-259ENST00000438510 ZNF429Q86V71 674 aa8.34□□□□□ -1.07
HLA-DMB-259ENST00000438510 OR5B3Q8NH48 314 aa8.34□□□□□ -1.07
HLA-DMB-259ENST00000438510 SGMS2Q8NHU3 365 aa8.34□□□□□ -1.07
HLA-DMB-259ENST00000438510 LINC01006Q8NI28 216 aa8.34□□□□□ -1.07
HLA-DMB-259ENST00000438510 GRPEL2Q8TAA5 225 aa8.34□□□□□ -1.07
HLA-DMB-259ENST00000438510 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.34□□□□□ -1.07
HLA-DMB-259ENST00000438510 TMEM14BQ9NUH8 114 aa8.34□□□□□ -1.07
HLA-DMB-259ENST00000438510 COA4Q9NYJ1 87 aa8.34□□□□□ -1.07
HLA-DMB-259ENST00000438510 CACNG5Q9UF02 275 aa8.34□□□□□ -1.07
HLA-DMB-259ENST00000438510 ZNF257Q9Y2Q1 563 aa8.34□□□□□ -1.07
HLA-DMB-259ENST00000438510 OR51B2Q9Y5P1 312 aa8.34□□□□□ -1.07
HLA-DMB-259ENST00000438510 TNCP24821 2201 aa8.34□□□□□ -1.07
HLA-DMB-259ENST00000438510 A0A0G2JRQ6 117 aa8.33□□□□□ -1.08
HLA-DMB-259ENST00000438510 A0A1B0GU03 582 aa8.33□□□□□ -1.08
HLA-DMB-259ENST00000438510 CLPSL1A2RUU4 121 aa8.33□□□□□ -1.08
HLA-DMB-259ENST00000438510 DBX1A6NMT0 343 aa8.33□□□□□ -1.08
HLA-DMB-259ENST00000438510 SLC25A6P12236 298 aa8.33□□□□□ -1.08
HLA-DMB-259ENST00000438510 CRIP2P52943 208 aaPredicted RBP8.33□□□□□ -1.08
HLA-DMB-259ENST00000438510 SLC35B1P78383 322 aa8.33□□□□□ -1.08
HLA-DMB-259ENST00000438510 SSBP2P81877 361 aaPredicted RBP8.33□□□□□ -1.08
HLA-DMB-259ENST00000438510 SMCO1Q147U7 214 aa8.33□□□□□ -1.08
HLA-DMB-259ENST00000438510 ECSCRQ19T08 205 aa8.33□□□□□ -1.08
HLA-DMB-259ENST00000438510 TMEM95Q3KNT9 176 aa8.33□□□□□ -1.08
HLA-DMB-259ENST00000438510 GGNBP1Q5YKI7 109 aa8.33□□□□□ -1.08
HLA-DMB-259ENST00000438510 MRPL41Q8IXM3 137 aaKnown RBP8.33□□□□□ -1.08
HLA-DMB-259ENST00000438510 STPG2Q8N412 459 aa8.33□□□□□ -1.08
HLA-DMB-259ENST00000438510 UXS1Q8NBZ7 420 aa8.33□□□□□ -1.08
HLA-DMB-259ENST00000438510 OR1L8Q8NGR8 309 aa8.33□□□□□ -1.08
HLA-DMB-259ENST00000438510 GPR146Q96CH1 333 aa8.33□□□□□ -1.08
HLA-DMB-259ENST00000438510 TMEM68Q96MH6 324 aa8.33□□□□□ -1.08
HLA-DMB-259ENST00000438510 SRSF8Q9BRL6 282 aaKnown RBP8.33□□□□□ -1.08
HLA-DMB-259ENST00000438510 C19orf24Q9BVV8 132 aa8.33□□□□□ -1.08
HLA-DMB-259ENST00000438510 QTRT1Q9BXR0 403 aaKnown RBP8.33□□□□□ -1.08
HLA-DMB-259ENST00000438510 SERTAD4Q9NUC0 356 aa8.33□□□□□ -1.08
HLA-DMB-259ENST00000438510 NSG2Q9Y328 171 aa8.33□□□□□ -1.08
HLA-DMB-259ENST00000438510 RNF114Q9Y508 228 aa8.33□□□□□ -1.08
HLA-DMB-259ENST00000438510 JMJD1CQ15652 2540 aa8.33□□□□□ -1.08
HLA-DMB-259ENST00000438510 TRAV41A0A0B4J266 112 aa8.32□□□□□ -1.08
HLA-DMB-259ENST00000438510 A0A0B4J293 547 aa8.32□□□□□ -1.08
HLA-DMB-259ENST00000438510 TEX50A0A1B0GTY4 177 aa8.32□□□□□ -1.08
HLA-DMB-259ENST00000438510 TMEM89A2RUT3 159 aa8.32□□□□□ -1.08
HLA-DMB-259ENST00000438510 HMX3A6NHT5 357 aa8.32□□□□□ -1.08
HLA-DMB-259ENST00000438510 SSNA1O43805 119 aa8.32□□□□□ -1.08
HLA-DMB-259ENST00000438510 ADAP1O75689 374 aa8.32□□□□□ -1.08
HLA-DMB-259ENST00000438510 MDKP21741 143 aaPredicted RBP8.32□□□□□ -1.08
HLA-DMB-259ENST00000438510 HSPE1P61604 102 aaKnown RBP8.32□□□□□ -1.08
HLA-DMB-259ENST00000438510 IZUMO4Q1ZYL8 232 aa8.32□□□□□ -1.08
HLA-DMB-259ENST00000438510 AARDQ4LEZ3 155 aa8.32□□□□□ -1.08
HLA-DMB-259ENST00000438510 AKIRIN2Q53H80 203 aa8.32□□□□□ -1.08
HLA-DMB-259ENST00000438510 C10orf55Q5SWW7 151 aa8.32□□□□□ -1.08
HLA-DMB-259ENST00000438510 HSD17B13Q7Z5P4 300 aaPredicted RBP8.32□□□□□ -1.08
HLA-DMB-259ENST00000438510 OR52E5Q8NH55 327 aa8.32□□□□□ -1.08
HLA-DMB-259ENST00000438510 OR1S1Q8NH92 325 aa8.32□□□□□ -1.08
HLA-DMB-259ENST00000438510 TAF15Q92804 592 aaKnown RBP eCLIP8.32□□□□□ -1.08
HLA-DMB-259ENST00000438510 FYTTD1Q96QD9 318 aaKnown RBP8.32□□□□□ -1.08
HLA-DMB-259ENST00000438510 FAM103A1Q9BTL3 118 aaKnown RBP8.32□□□□□ -1.08
HLA-DMB-259ENST00000438510 ALG5Q9Y673 324 aa8.32□□□□□ -1.08
HLA-DMB-259ENST00000438510 A0A1W2PN81 502 aa8.31□□□□□ -1.08
HLA-DMB-259ENST00000438510 PSMB11A5LHX3 300 aa8.31□□□□□ -1.08
HLA-DMB-259ENST00000438510 MSGN1A6NI15 193 aa8.31□□□□□ -1.08
HLA-DMB-259ENST00000438510 LINC01548A6NM66 108 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms