RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 MRPL54Q6P161 138 aaKnown RBP13.1□□□□□ -0.31
NEDD4-202ENST00000435532 GATA3P23771 443 aa13.09□□□□□ -0.31
NEDD4-202ENST00000435532 SAPCD1Q5SSQ6 148 aa13.09□□□□□ -0.31
NEDD4-202ENST00000435532 TEX45Q8NA69 505 aa13.09□□□□□ -0.31
NEDD4-202ENST00000435532 CLPSP04118 112 aa13.09□□□□□ -0.31
NEDD4-202ENST00000435532 BCL2P10415 239 aa13.09□□□□□ -0.31
NEDD4-202ENST00000435532 NPDC1Q9NQX5 325 aaPredicted RBP13.09□□□□□ -0.31
NEDD4-202ENST00000435532 CXCL3P19876 107 aa13.09□□□□□ -0.31
NEDD4-202ENST00000435532 C5orf66Q9H5L9 145 aa13.09□□□□□ -0.31
NEDD4-202ENST00000435532 AP5S1Q9NUS5 200 aa13.09□□□□□ -0.31
NEDD4-202ENST00000435532 DPH3Q96FX2 82 aa13.09□□□□□ -0.31
NEDD4-202ENST00000435532 RSG1Q9BU20 258 aa13.09□□□□□ -0.31
NEDD4-202ENST00000435532 MAP1LC3CQ9BXW4 147 aa13.09□□□□□ -0.31
NEDD4-202ENST00000435532 NABP2Q9BQ15 211 aa13.08□□□□□ -0.31
NEDD4-202ENST00000435532 WNT10AQ9GZT5 417 aa13.08□□□□□ -0.31
NEDD4-202ENST00000435532 HSPB8Q9UJY1 196 aa13.08□□□□□ -0.31
NEDD4-202ENST00000435532 LYPD3O95274 346 aa13.08□□□□□ -0.32
NEDD4-202ENST00000435532 STHQ8IWL8 128 aa13.08□□□□□ -0.32
NEDD4-202ENST00000435532 PLPPR1Q8TBJ4 325 aa13.08□□□□□ -0.32
NEDD4-202ENST00000435532 COL4A6Q14031 1691 aa13.08□□□□□ -0.32
NEDD4-202ENST00000435532 SAA2-SAA4A0A096LPE2 208 aa13.08□□□□□ -0.32
NEDD4-202ENST00000435532 A6NNC1 897 aa13.08□□□□□ -0.32
NEDD4-202ENST00000435532 SAA2P0DJI9 122 aaPredicted RBP13.08□□□□□ -0.32
NEDD4-202ENST00000435532 TMEM88Q6PEY1 159 aa13.08□□□□□ -0.32
NEDD4-202ENST00000435532 ZNF497Q6ZNH5 498 aa13.08□□□□□ -0.32
NEDD4-202ENST00000435532 GTF3AQ92664 365 aaKnown RBP13.08□□□□□ -0.32
NEDD4-202ENST00000435532 PSMB11A5LHX3 300 aa13.08□□□□□ -0.32
NEDD4-202ENST00000435532 GAS1P54826 345 aa13.08□□□□□ -0.32
NEDD4-202ENST00000435532 VAMP8Q9BV40 100 aa13.08□□□□□ -0.32
NEDD4-202ENST00000435532 MSGN1A6NI15 193 aa13.08□□□□□ -0.32
NEDD4-202ENST00000435532 IGHV3-11P01762 117 aa13.08□□□□□ -0.32
NEDD4-202ENST00000435532 TCF15Q12870 199 aa13.08□□□□□ -0.32
NEDD4-202ENST00000435532 ST6GAL2Q96JF0 529 aa13.08□□□□□ -0.32
NEDD4-202ENST00000435532 OR5AC2Q9NZP5 309 aa13.07□□□□□ -0.32
NEDD4-202ENST00000435532 IGHV3-35A0A0C4DH35 117 aa13.07□□□□□ -0.32
NEDD4-202ENST00000435532 DLX1P56177 255 aa13.07□□□□□ -0.32
NEDD4-202ENST00000435532 RUNX1Q01196 453 aa13.07□□□□□ -0.32
NEDD4-202ENST00000435532 Q5PR19 223 aa13.07□□□□□ -0.32
NEDD4-202ENST00000435532 PACRGQ96M98 296 aaPredicted RBP13.07□□□□□ -0.32
NEDD4-202ENST00000435532 ZNF253O75346 499 aa13.07□□□□□ -0.32
NEDD4-202ENST00000435532 IGKV3-20P01619 116 aa13.07□□□□□ -0.32
NEDD4-202ENST00000435532 C12orf54Q6X4T0 127 aa13.07□□□□□ -0.32
NEDD4-202ENST00000435532 LINC00305Q7Z4B0 112 aa13.07□□□□□ -0.32
NEDD4-202ENST00000435532 CACNG8Q8WXS5 425 aa13.07□□□□□ -0.32
NEDD4-202ENST00000435532 ZDBF2Q9HCK1 2354 aa13.07□□□□□ -0.32
NEDD4-202ENST00000435532 PLXNA3P51805 1871 aa13.07□□□□□ -0.32
NEDD4-202ENST00000435532 LY6G6EA0A0G2JKS1 128 aa13.07□□□□□ -0.32
NEDD4-202ENST00000435532 C7orf66A4D0T2 115 aa13.07□□□□□ -0.32
NEDD4-202ENST00000435532 LYRM7Q5U5X0 104 aa13.07□□□□□ -0.32
NEDD4-202ENST00000435532 LRP11Q86VZ4 500 aa13.07□□□□□ -0.32
NEDD4-202ENST00000435532 DUX3Q96PT4 197 aa13.07□□□□□ -0.32
NEDD4-202ENST00000435532 U3KQA8 63 aa13.07□□□□□ -0.32
NEDD4-202ENST00000435532 EFNA2O43921 213 aa13.06□□□□□ -0.32
NEDD4-202ENST00000435532 CD99P14209 185 aa13.06□□□□□ -0.32
NEDD4-202ENST00000435532 GPHA2Q96T91 129 aa13.06□□□□□ -0.32
NEDD4-202ENST00000435532 TMEM191AQ9H0A3 160 aa13.06□□□□□ -0.32
NEDD4-202ENST00000435532 CDC42EP3Q9UKI2 254 aa13.06□□□□□ -0.32
NEDD4-202ENST00000435532 SEC16AO15027 2179 aa13.06□□□□□ -0.32
NEDD4-202ENST00000435532 CRXO43186 299 aaPredicted RBP13.06□□□□□ -0.32
NEDD4-202ENST00000435532 MORN2Q502X0 79 aa13.06□□□□□ -0.32
NEDD4-202ENST00000435532 C3orf56Q8N813 242 aa13.06□□□□□ -0.32
NEDD4-202ENST00000435532 C17orf98A8MV24 154 aa13.06□□□□□ -0.32
NEDD4-202ENST00000435532 NPFFO15130 113 aa13.06□□□□□ -0.32
NEDD4-202ENST00000435532 SMUG1Q53HV7 270 aa13.06□□□□□ -0.32
NEDD4-202ENST00000435532 RPRMQ9NS64 109 aa13.06□□□□□ -0.32
NEDD4-202ENST00000435532 OR4C46A6NHA9 309 aa13.06□□□□□ -0.32
NEDD4-202ENST00000435532 SRRM5B3KS81 715 aa13.06□□□□□ -0.32
NEDD4-202ENST00000435532 CCKARP32238 428 aa13.06□□□□□ -0.32
NEDD4-202ENST00000435532 LDLRAD2Q5SZI1 272 aa13.06□□□□□ -0.32
NEDD4-202ENST00000435532 LYZL4Q96KX0 146 aa13.06□□□□□ -0.32
NEDD4-202ENST00000435532 RNF114Q9Y508 228 aa13.06□□□□□ -0.32
NEDD4-202ENST00000435532 H7C1H1 209 aa13.06□□□□□ -0.32
NEDD4-202ENST00000435532 UPK2O00526 184 aa13.06□□□□□ -0.32
NEDD4-202ENST00000435532 CEACAM4O75871 244 aa13.06□□□□□ -0.32
NEDD4-202ENST00000435532 GSX1Q9H4S2 264 aaPredicted RBP13.06□□□□□ -0.32
NEDD4-202ENST00000435532 IGFBP3P17936 291 aaPredicted RBP13.05□□□□□ -0.32
NEDD4-202ENST00000435532 B3GALT5-AS1P59052 145 aa13.05□□□□□ -0.32
NEDD4-202ENST00000435532 TMEM155Q4W5P6 130 aa13.05□□□□□ -0.32
NEDD4-202ENST00000435532 IBA57Q5T440 356 aaKnown RBP13.05□□□□□ -0.32
NEDD4-202ENST00000435532 TIMM23O14925 209 aa13.05□□□□□ -0.32
NEDD4-202ENST00000435532 ZNF207O43670 478 aaKnown RBP13.05□□□□□ -0.32
NEDD4-202ENST00000435532 DUSP14O95147 198 aaKnown RBP13.05□□□□□ -0.32
NEDD4-202ENST00000435532 SNRPCP09234 159 aaKnown RBP13.05□□□□□ -0.32
NEDD4-202ENST00000435532 PAX1P15863 534 aa13.05□□□□□ -0.32
NEDD4-202ENST00000435532 ZP1P60852 638 aa13.05□□□□□ -0.32
NEDD4-202ENST00000435532 HIST3H3Q16695 136 aa13.05□□□□□ -0.32
NEDD4-202ENST00000435532 TBL2Q9Y4P3 447 aaKnown RBP13.05□□□□□ -0.32
NEDD4-202ENST00000435532 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.05□□□□□ -0.32
NEDD4-202ENST00000435532 SAA1P0DJI8 122 aaPredicted RBP13.05□□□□□ -0.32
NEDD4-202ENST00000435532 LEPP41159 167 aa13.05□□□□□ -0.32
NEDD4-202ENST00000435532 HERPUD1Q15011 391 aa13.05□□□□□ -0.32
NEDD4-202ENST00000435532 PRR30Q53SZ7 412 aaPredicted RBP13.05□□□□□ -0.32
NEDD4-202ENST00000435532 LILRA1O75019 489 aa13.05□□□□□ -0.32
NEDD4-202ENST00000435532 AMY1AP04745 511 aa13.05□□□□□ -0.32
NEDD4-202ENST00000435532 SULT1A2P50226 295 aa13.05□□□□□ -0.32
NEDD4-202ENST00000435532 ZNF56Q15929 161 aa13.05□□□□□ -0.32
NEDD4-202ENST00000435532 TP53RKQ96S44 253 aa13.05□□□□□ -0.32
NEDD4-202ENST00000435532 OR9G9P0C7N8 305 aa13.05□□□□□ -0.32
NEDD4-202ENST00000435532 GPX4P36969 197 aaPredicted RBP13.05□□□□□ -0.32
NEDD4-202ENST00000435532 IQCJQ1A5X6 159 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms