RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 PSG9Q00887 426 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 RNASEKQ6P5S7 137 aaKnown RBP6.28□□□□□ -1.4
CPSF6-202ENST00000435070 TSKUQ8WUA8 353 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 MAP1BP46821 2468 aaKnown RBP6.28□□□□□ -1.4
CPSF6-202ENST00000435070 C2orf16Q68DN1 1984 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 hDV102S1A0JD36 115 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 K7EN84 100 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 TNFSF11O14788 317 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 GPM6AP51674 278 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 Q0VG73 95 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 RPEL1Q2QD12 228 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 MAFAQ8NHW3 353 aaPredicted RBP6.28□□□□□ -1.4
CPSF6-202ENST00000435070 CLEC1BQ9P126 229 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 OR2W1Q9Y3N9 320 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 KIR2DS1A0A191URI9 304 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 NPIPB13A6NJU9 1138 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 NPIPB4C9JG80 1138 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 SLC25A5P05141 298 aaKnown RBP6.28□□□□□ -1.4
CPSF6-202ENST00000435070 KIR2DS4P43632 304 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 KIR2DS1Q14954 304 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 PMCHL1Q16048 86 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 GFRALQ6UXV0 394 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 FA2HQ7L5A8 372 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 AHCTF1Q8WYP5 2266 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 ESDP10768 282 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 CCL2P13500 99 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 ZNF32P17041 273 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 GABRA6Q16445 453 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 KIR3DL3Q8N743 410 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 OR4F17Q8NGA8 305 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 FAM216AQ8WUB2 273 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 SSMEM1Q8WWF3 244 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 ABCA1O95477 2261 aa6.27□□□□□ -1.41
CPSF6-202ENST00000435070 CELA3BP08861 270 aa6.27□□□□□ -1.41
CPSF6-202ENST00000435070 CT45A10P0DMU9 189 aa6.27□□□□□ -1.41
CPSF6-202ENST00000435070 DAZAP2Q15038 168 aaPredicted RBP6.27□□□□□ -1.41
CPSF6-202ENST00000435070 TNXAQ16473 311 aa6.27□□□□□ -1.41
CPSF6-202ENST00000435070 FAM53AQ6NSI3 398 aaPredicted RBP6.27□□□□□ -1.41
CPSF6-202ENST00000435070 DEFB108BQ8NET1 73 aa6.27□□□□□ -1.41
CPSF6-202ENST00000435070 KCNE4Q8WWG9 221 aa6.27□□□□□ -1.41
CPSF6-202ENST00000435070 TMEM131Q92545 1883 aa6.27□□□□□ -1.41
CPSF6-202ENST00000435070 TRAV9-2A0A087WT02 112 aa6.27□□□□□ -1.41
CPSF6-202ENST00000435070 TRAV8-6A0A0B4J262 113 aa6.27□□□□□ -1.41
CPSF6-202ENST00000435070 RNASE1P07998 156 aaKnown RBP6.27□□□□□ -1.41
CPSF6-202ENST00000435070 ZNF585BQ52M93 769 aa6.27□□□□□ -1.41
CPSF6-202ENST00000435070 PCSK4Q6UW60 755 aa6.27□□□□□ -1.41
CPSF6-202ENST00000435070 MRGPRX1Q96LB2 322 aa6.27□□□□□ -1.41
CPSF6-202ENST00000435070 PMCHL2Q9BQD1 86 aa6.27□□□□□ -1.41
CPSF6-202ENST00000435070 TMPRSS2O15393 492 aa6.27□□□□□ -1.41
CPSF6-202ENST00000435070 GPR6P46095 362 aaPredicted RBP6.27□□□□□ -1.41
CPSF6-202ENST00000435070 CSN1S1P47710 185 aa6.27□□□□□ -1.41
CPSF6-202ENST00000435070 LINC00205P59089 165 aa6.27□□□□□ -1.41
CPSF6-202ENST00000435070 H2BFWTQ7Z2G1 175 aa6.27□□□□□ -1.41
CPSF6-202ENST00000435070 TDHQ8IZJ6 230 aa6.27□□□□□ -1.41
CPSF6-202ENST00000435070 SSBP3Q9BWW4 388 aaPredicted RBP6.27□□□□□ -1.41
CPSF6-202ENST00000435070 TECRQ9NZ01 308 aaKnown RBP6.27□□□□□ -1.41
CPSF6-202ENST00000435070 IGKV3D-11A0A0A0MRZ8 115 aa6.27□□□□□ -1.41
CPSF6-202ENST00000435070 UBE2G1P62253 170 aa6.27□□□□□ -1.41
CPSF6-202ENST00000435070 AESQ08117 197 aa6.27□□□□□ -1.41
CPSF6-202ENST00000435070 SRSF9Q13242 221 aaKnown RBP eCLIP6.27□□□□□ -1.41
CPSF6-202ENST00000435070 MORN2Q502X0 79 aa6.27□□□□□ -1.41
CPSF6-202ENST00000435070 EBLN2Q6P2I7 272 aa6.27□□□□□ -1.41
CPSF6-202ENST00000435070 RTL8AQ9BWD3 113 aa6.27□□□□□ -1.41
CPSF6-202ENST00000435070 FNDC4Q9H6D8 234 aaPredicted RBP6.27□□□□□ -1.41
CPSF6-202ENST00000435070 FREM1Q5H8C1 2179 aa6.27□□□□□ -1.41
CPSF6-202ENST00000435070 A0A087X0K7 114 aa6.27□□□□□ -1.41
CPSF6-202ENST00000435070 RAMP3O60896 148 aa6.27□□□□□ -1.41
CPSF6-202ENST00000435070 PARM1Q6UWI2 310 aa6.27□□□□□ -1.41
CPSF6-202ENST00000435070 TMEM14EPQ6UXP3 125 aa6.27□□□□□ -1.41
CPSF6-202ENST00000435070 GAGE10A6NGK3 116 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 RRHO14718 337 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 SSTR5P35346 364 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 YPEL5P62699 121 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 MIC13Q5XKP0 118 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 OR8B2Q96RD0 313 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 KIR2DL1P43626 348 aaPredicted RBP6.26□□□□□ -1.41
CPSF6-202ENST00000435070 LRRC10Q5BKY1 277 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 OR1F12Q8NHA8 337 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 OR2T6Q8NHC8 308 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 NABP1Q96AH0 204 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 CRISPLD2Q9H0B8 497 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 COL6A3P12111 3177 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 A0A096LPE4 126 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 A0A1W2PPZ6 126 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 A0A1W2PQF6 199 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 CORTO00230 105 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 SYNGR1O43759 233 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 FABP2P12104 132 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 SUB1P53999 127 aaKnown RBP eCLIP6.26□□□□□ -1.411e-8■■■■■ 40.1
CPSF6-202ENST00000435070 MUC15Q8N387 334 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 MRAPQ8TCY5 172 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 HEYLQ9NQ87 328 aaPredicted RBP6.26□□□□□ -1.41
CPSF6-202ENST00000435070 OR4C46A6NHA9 309 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 FAM90A27PA6NNH2 459 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 OR7C2O60412 319 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 RHBDL1O75783 438 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 MYF5P13349 255 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 OR1N2Q8NGR9 330 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 TMEM101Q96IK0 257 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 CDC42EP3Q9UKI2 254 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms