RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 TMEM269A0A1B0GVZ9 245 aa0.41□□□□□ -2.34
LINC01239-201ENST00000433645 DISC1C4P0D8 188 aa0.41□□□□□ -2.34
LINC01239-201ENST00000433645 HSBP1L1C9JCN9 74 aa0.41□□□□□ -2.34
LINC01239-201ENST00000433645 SMLR1H3BR10 107 aa0.41□□□□□ -2.34
LINC01239-201ENST00000433645 LEPROTO15243 131 aa0.41□□□□□ -2.34
LINC01239-201ENST00000433645 HPGDSO60760 199 aa0.41□□□□□ -2.34
LINC01239-201ENST00000433645 NSA2O95478 260 aaKnown RBP0.41□□□□□ -2.34
LINC01239-201ENST00000433645 PET100P0DJ07 73 aa0.41□□□□□ -2.34
LINC01239-201ENST00000433645 CLDN12P56749 244 aa0.41□□□□□ -2.34
LINC01239-201ENST00000433645 SYCE1Q8N0S2 351 aa0.41□□□□□ -2.34
LINC01239-201ENST00000433645 SMIM19Q96E16 107 aa0.41□□□□□ -2.34
LINC01239-201ENST00000433645 SERPINI1Q99574 410 aa0.41□□□□□ -2.34
LINC01239-201ENST00000433645 BBS2Q9BXC9 721 aa0.41□□□□□ -2.34
LINC01239-201ENST00000433645 TIMM22Q9Y584 194 aa0.41□□□□□ -2.34
LINC01239-201ENST00000433645 LAMA4Q16363 1823 aa0.41□□□□□ -2.34
LINC01239-201ENST00000433645 COL4A5P29400 1685 aa0.4□□□□□ -2.34
LINC01239-201ENST00000433645 TINCRA0A1B0GVN0 87 aa0.4□□□□□ -2.35
LINC01239-201ENST00000433645 IRGMA1A4Y4 181 aa0.4□□□□□ -2.35
LINC01239-201ENST00000433645 ITGB1BP1O14713 200 aa0.4□□□□□ -2.35
LINC01239-201ENST00000433645 SLC22A1O15245 554 aa0.4□□□□□ -2.35
LINC01239-201ENST00000433645 RD3LP0DJH9 198 aa0.4□□□□□ -2.35
LINC01239-201ENST00000433645 SULT1A3P0DMM9 295 aa0.4□□□□□ -2.35
LINC01239-201ENST00000433645 SULT1A4P0DMN0 295 aa0.4□□□□□ -2.35
LINC01239-201ENST00000433645 CD151P48509 253 aa0.4□□□□□ -2.35
LINC01239-201ENST00000433645 CDK10Q15131 360 aa0.4□□□□□ -2.35
LINC01239-201ENST00000433645 TNFAIP8L3Q5GJ75 292 aa0.4□□□□□ -2.35
LINC01239-201ENST00000433645 SAPCD1Q5SSQ6 148 aa0.4□□□□□ -2.35
LINC01239-201ENST00000433645 TNFAIP8L2Q6P589 184 aaPredicted RBP0.4□□□□□ -2.35
LINC01239-201ENST00000433645 KRTAP19-3Q7Z4W3 81 aa0.4□□□□□ -2.35
LINC01239-201ENST00000433645 Q8N402 240 aa0.4□□□□□ -2.35
LINC01239-201ENST00000433645 TBC1D19Q8N5T2 526 aa0.4□□□□□ -2.35
LINC01239-201ENST00000433645 ZNF676Q8N7Q3 588 aa0.4□□□□□ -2.35
LINC01239-201ENST00000433645 OR1M1Q8NGA1 313 aa0.4□□□□□ -2.35
LINC01239-201ENST00000433645 OR2T27Q8NH04 317 aa0.4□□□□□ -2.35
LINC01239-201ENST00000433645 OR4C6Q8NH72 309 aa0.4□□□□□ -2.35
LINC01239-201ENST00000433645 LINC00526Q96FQ7 95 aa0.4□□□□□ -2.35
LINC01239-201ENST00000433645 DERL2Q9GZP9 239 aa0.4□□□□□ -2.35
LINC01239-201ENST00000433645 CHMP4BQ9H444 224 aaKnown RBP0.4□□□□□ -2.35
LINC01239-201ENST00000433645 OR5AC2Q9NZP5 309 aa0.4□□□□□ -2.35
LINC01239-201ENST00000433645 ANAPC10Q9UM13 185 aa0.4□□□□□ -2.35
LINC01239-201ENST00000433645 KIF15Q9NS87 1388 aa0.4□□□□□ -2.35
LINC01239-201ENST00000433645 ANAPC1Q9H1A4 1944 aa0.4□□□□□ -2.35
LINC01239-201ENST00000433645 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.39□□□□□ -2.35
LINC01239-201ENST00000433645 LOC110117498A0A087WWA1 95 aa0.39□□□□□ -2.35
LINC01239-201ENST00000433645 LST1O00453 97 aa0.39□□□□□ -2.35
LINC01239-201ENST00000433645 PMP2P02689 132 aa0.39□□□□□ -2.35
LINC01239-201ENST00000433645 SHBGP04278 402 aa0.39□□□□□ -2.35
LINC01239-201ENST00000433645 KRT7P08729 469 aa0.39□□□□□ -2.35
LINC01239-201ENST00000433645 FGF6P10767 208 aa0.39□□□□□ -2.35
LINC01239-201ENST00000433645 CSN1S1P47710 185 aa0.39□□□□□ -2.35
LINC01239-201ENST00000433645 CDC34P49427 236 aaPredicted RBP0.39□□□□□ -2.35
LINC01239-201ENST00000433645 TNFAIP6P98066 277 aaPredicted RBP0.39□□□□□ -2.35
LINC01239-201ENST00000433645 ZNF345Q14585 488 aa0.39□□□□□ -2.35
LINC01239-201ENST00000433645 ANKRD7Q92527 254 aa0.39□□□□□ -2.35
LINC01239-201ENST00000433645 ROPN1LQ96C74 230 aa0.39□□□□□ -2.35
LINC01239-201ENST00000433645 BAIAP2Q9UQB8 552 aa0.39□□□□□ -2.35
LINC01239-201ENST00000433645 POLR1DQ9Y2S0 133 aa0.39□□□□□ -2.35
LINC01239-201ENST00000433645 COQ4Q9Y3A0 265 aa0.39□□□□□ -2.35
LINC01239-201ENST00000433645 KIF24Q5T7B8 1368 aa0.39□□□□□ -2.35
LINC01239-201ENST00000433645 A0A087WX48 190 aa0.38□□□□□ -2.35
LINC01239-201ENST00000433645 FUOMA2VDF0 154 aa0.38□□□□□ -2.35
LINC01239-201ENST00000433645 TRPC5OSA6NMA1 111 aa0.38□□□□□ -2.35
LINC01239-201ENST00000433645 OR4C45A6NMZ5 311 aa0.38□□□□□ -2.35
LINC01239-201ENST00000433645 BIRC5O15392 142 aa0.38□□□□□ -2.35
LINC01239-201ENST00000433645 NOS1APO75052 506 aaPredicted RBP0.38□□□□□ -2.35
LINC01239-201ENST00000433645 IGHV3-7P01780 117 aa0.38□□□□□ -2.35
LINC01239-201ENST00000433645 IL3P08700 152 aa0.38□□□□□ -2.35
LINC01239-201ENST00000433645 RAB13P51153 203 aa0.38□□□□□ -2.35
LINC01239-201ENST00000433645 ZNF80P51504 273 aaPredicted RBP0.38□□□□□ -2.35
LINC01239-201ENST00000433645 RUNX1Q01196 453 aa0.38□□□□□ -2.35
LINC01239-201ENST00000433645 DMTNQ08495 405 aa0.38□□□□□ -2.35
LINC01239-201ENST00000433645 EEF1AKMT1Q8WVE0 214 aa0.38□□□□□ -2.35
LINC01239-201ENST00000433645 DCUN1D5Q9BTE7 237 aa0.38□□□□□ -2.35
LINC01239-201ENST00000433645 OR8D2Q9GZM6 311 aa0.38□□□□□ -2.35
LINC01239-201ENST00000433645 OR51I2Q9H344 312 aa0.38□□□□□ -2.35
LINC01239-201ENST00000433645 MAST2Q6P0Q8 1798 aa0.37□□□□□ -2.35
LINC01239-201ENST00000433645 ERICH2A1L162 156 aa0.37□□□□□ -2.35
LINC01239-201ENST00000433645 C21orf140B9A014 251 aa0.37□□□□□ -2.35
LINC01239-201ENST00000433645 HLA-DRAP01903 254 aa0.37□□□□□ -2.35
LINC01239-201ENST00000433645 OCMP0CE72 109 aaPredicted RBP0.37□□□□□ -2.35
LINC01239-201ENST00000433645 UBBP0CG47 229 aa0.37□□□□□ -2.35
LINC01239-201ENST00000433645 OR4D2P58180 307 aa0.37□□□□□ -2.35
LINC01239-201ENST00000433645 CAV1Q03135 178 aa0.37□□□□□ -2.35
LINC01239-201ENST00000433645 BATFQ16520 125 aa0.37□□□□□ -2.35
LINC01239-201ENST00000433645 C1orf194Q5T5A4 169 aa0.37□□□□□ -2.35
LINC01239-201ENST00000433645 GPR32P1Q8NGA4 272 aa0.37□□□□□ -2.35
LINC01239-201ENST00000433645 C11orf40Q8WZ69 217 aa0.37□□□□□ -2.35
LINC01239-201ENST00000433645 AQP3Q92482 292 aa0.37□□□□□ -2.35
LINC01239-201ENST00000433645 FKBP14Q9NWM8 211 aa0.37□□□□□ -2.35
LINC01239-201ENST00000433645 USP24Q9UPU5 2620 aa0.36□□□□□ -2.35
LINC01239-201ENST00000433645 TRAV14DV4A0A0A6YYC5 116 aa0.36□□□□□ -2.35
LINC01239-201ENST00000433645 GOLGA6L19H0YKK7 550 aa0.36□□□□□ -2.35
LINC01239-201ENST00000433645 GOLGA8MH3BSY2 632 aa0.36□□□□□ -2.35
LINC01239-201ENST00000433645 SRP19P09132 144 aaKnown RBP0.36□□□□□ -2.35
LINC01239-201ENST00000433645 UGT2B7P16662 529 aa0.36□□□□□ -2.35
LINC01239-201ENST00000433645 CCL1P22362 96 aa0.36□□□□□ -2.35
LINC01239-201ENST00000433645 HLA-DMBP28068 263 aa0.36□□□□□ -2.35
LINC01239-201ENST00000433645 PSMB6P28072 239 aa0.36□□□□□ -2.35
LINC01239-201ENST00000433645 S100A7P31151 101 aa0.36□□□□□ -2.35
LINC01239-201ENST00000433645 RPL18Q07020 188 aaKnown RBP0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms