RNA–Protein interactions for RNA: ENST00000430548.5

AC004540.1-202, humanhuman

TSL 4

Gene AC004540.1, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-202ENST00000430548 SELENOKQ9Y6D0 94 aa13.9□□□□□ -0.18
AC004540.1-202ENST00000430548 KMT2AQ03164 3969 aa13.9□□□□□ -0.19
AC004540.1-202ENST00000430548 LOC102724200A0A096LPH7 203 aaPredicted RBP13.89□□□□□ -0.19
AC004540.1-202ENST00000430548 IGLC7A0M8Q6 106 aa13.89□□□□□ -0.19
AC004540.1-202ENST00000430548 SCAF4O95104 1147 aaKnown RBP13.89□□□□□ -0.19
AC004540.1-202ENST00000430548 REG1AP05451 166 aa13.89□□□□□ -0.19
AC004540.1-202ENST00000430548 HSPA13P48723 471 aa13.89□□□□□ -0.19
AC004540.1-202ENST00000430548 OR2B8PP59922 312 aa13.89□□□□□ -0.19
AC004540.1-202ENST00000430548 GABARAPL2P60520 117 aa13.89□□□□□ -0.19
AC004540.1-202ENST00000430548 ANKRD55Q3KP44 614 aa13.89□□□□□ -0.19
AC004540.1-202ENST00000430548 UBE2UQ5VVX9 321 aa13.89□□□□□ -0.19
AC004540.1-202ENST00000430548 SSX9Q7RTT3 188 aa13.89□□□□□ -0.19
AC004540.1-202ENST00000430548 ZNF502Q8TBZ5 544 aa13.89□□□□□ -0.19
AC004540.1-202ENST00000430548 LGALS14Q8TCE9 139 aa13.89□□□□□ -0.19
AC004540.1-202ENST00000430548 TXNL4BQ9NX01 149 aaKnown RBP13.89□□□□□ -0.19
AC004540.1-202ENST00000430548 ZNF320A2RRD8 509 aa13.88□□□□□ -0.19
AC004540.1-202ENST00000430548 MRPS14O60783 128 aaKnown RBP13.88□□□□□ -0.19
AC004540.1-202ENST00000430548 ELLP55199 621 aaPredicted RBP13.88□□□□□ -0.19
AC004540.1-202ENST00000430548 TM4SF20Q53R12 229 aa13.88□□□□□ -0.19
AC004540.1-202ENST00000430548 IZUMO2Q6UXV1 221 aa13.88□□□□□ -0.19
AC004540.1-202ENST00000430548 TPRA1Q86W33 373 aa13.88□□□□□ -0.19
AC004540.1-202ENST00000430548 OR13F1Q8NGS4 319 aa13.88□□□□□ -0.19
AC004540.1-202ENST00000430548 CNBD2Q96M20 576 aa13.88□□□□□ -0.19
AC004540.1-202ENST00000430548 SRSF8Q9BRL6 282 aaKnown RBP13.88□□□□□ -0.19
AC004540.1-202ENST00000430548 ZNF436Q9C0F3 470 aaPredicted RBP13.88□□□□□ -0.19
AC004540.1-202ENST00000430548 RHBDL2Q9NX52 303 aa13.88□□□□□ -0.19
AC004540.1-202ENST00000430548 TP53TG1Q9Y2A0 90 aa13.88□□□□□ -0.19
AC004540.1-202ENST00000430548 GPR183P32249 361 aa13.87□□□□□ -0.19
AC004540.1-202ENST00000430548 SCAND1P57086 179 aa13.87□□□□□ -0.19
AC004540.1-202ENST00000430548 TAS2R31P59538 309 aa13.87□□□□□ -0.19
AC004540.1-202ENST00000430548 SFXN4Q6P4A7 337 aa13.87□□□□□ -0.19
AC004540.1-202ENST00000430548 SPAG16Q8N0X2 631 aa13.87□□□□□ -0.19
AC004540.1-202ENST00000430548 ZBTB34Q8NCN2 500 aa13.87□□□□□ -0.19
AC004540.1-202ENST00000430548 BEST4Q8NFU0 473 aa13.87□□□□□ -0.19
AC004540.1-202ENST00000430548 AIFM2Q9BRQ8 373 aa13.87□□□□□ -0.19
AC004540.1-202ENST00000430548 VCX3BQ9H321 246 aa13.87□□□□□ -0.19
AC004540.1-202ENST00000430548 CCL28Q9NRJ3 127 aa13.87□□□□□ -0.19
AC004540.1-202ENST00000430548 MRPL27Q9P0M9 148 aaKnown RBP13.87□□□□□ -0.19
AC004540.1-202ENST00000430548 DAPK2Q9UIK4 370 aa13.87□□□□□ -0.19
AC004540.1-202ENST00000430548 TNFSF12O43508 249 aa13.86□□□□□ -0.19
AC004540.1-202ENST00000430548 PPYP01298 95 aa13.86□□□□□ -0.19
AC004540.1-202ENST00000430548 CLEC3BP05452 202 aa13.86□□□□□ -0.19
AC004540.1-202ENST00000430548 DEFA4P12838 97 aa13.86□□□□□ -0.19
AC004540.1-202ENST00000430548 TNFRSF9Q07011 255 aa13.86□□□□□ -0.19
AC004540.1-202ENST00000430548 ZNF773Q6PK81 442 aa13.86□□□□□ -0.19
AC004540.1-202ENST00000430548 OR1L6Q8NGR2 347 aa13.86□□□□□ -0.19
AC004540.1-202ENST00000430548 SECTM1Q8WVN6 248 aa13.86□□□□□ -0.19
AC004540.1-202ENST00000430548 TMEM190Q8WZ59 177 aa13.86□□□□□ -0.19
AC004540.1-202ENST00000430548 SLC25A38Q96DW6 304 aa13.86□□□□□ -0.19
AC004540.1-202ENST00000430548 SPAG8Q99932 426 aaPredicted RBP13.86□□□□□ -0.19
AC004540.1-202ENST00000430548 UFC1Q9Y3C8 167 aa13.86□□□□□ -0.19
AC004540.1-202ENST00000430548 HPRT1P00492 218 aa13.85□□□□□ -0.19
AC004540.1-202ENST00000430548 NQO2P16083 231 aa13.85□□□□□ -0.19
AC004540.1-202ENST00000430548 ATF4P18848 351 aaPredicted RBP13.85□□□□□ -0.19
AC004540.1-202ENST00000430548 PTBP1P26599 531 aaKnown RBP eCLIP13.85□□□□□ -0.19
AC004540.1-202ENST00000430548 FCGR2CP31995 323 aa13.85□□□□□ -0.19
AC004540.1-202ENST00000430548 ARPC4P59998 168 aa13.85□□□□□ -0.19
AC004540.1-202ENST00000430548 EWSR1Q01844 656 aaKnown RBP eCLIP13.85□□□□□ -0.19
AC004540.1-202ENST00000430548 Q6ZWC4 215 aa13.85□□□□□ -0.19
AC004540.1-202ENST00000430548 HOGA1Q86XE5 327 aa13.85□□□□□ -0.19
AC004540.1-202ENST00000430548 C5orf66Q9H5L9 145 aa13.85□□□□□ -0.19
AC004540.1-202ENST00000430548 HRASLSQ9HDD0 168 aa13.85□□□□□ -0.19
AC004540.1-202ENST00000430548 RRP15Q9Y3B9 282 aaKnown RBP13.85□□□□□ -0.19
AC004540.1-202ENST00000430548 TRAV3A0A0B4J244 114 aa13.84□□□□□ -0.19
AC004540.1-202ENST00000430548 NUPR2A6NF83 97 aa13.84□□□□□ -0.19
AC004540.1-202ENST00000430548 UPK2O00526 184 aa13.84□□□□□ -0.19
AC004540.1-202ENST00000430548 TGOLN2O43493 480 aa13.84□□□□□ -0.19
AC004540.1-202ENST00000430548 PTHLHP12272 177 aa13.84□□□□□ -0.19
AC004540.1-202ENST00000430548 CATR1Q13166 79 aa13.84□□□□□ -0.19
AC004540.1-202ENST00000430548 ZNF585BQ52M93 769 aa13.84□□□□□ -0.19
AC004540.1-202ENST00000430548 THOC7Q6I9Y2 204 aaKnown RBP13.84□□□□□ -0.19
AC004540.1-202ENST00000430548 OR2C3Q8N628 320 aa13.84□□□□□ -0.19
AC004540.1-202ENST00000430548 GVQW1Q8N7I0 195 aa13.84□□□□□ -0.19
AC004540.1-202ENST00000430548 GDPD1Q8N9F7 314 aa13.84□□□□□ -0.19
AC004540.1-202ENST00000430548 VN1R17PQ8TDU5 208 aa13.84□□□□□ -0.19
AC004540.1-202ENST00000430548 THYN1Q9P016 225 aa13.84□□□□□ -0.19
AC004540.1-202ENST00000430548 ETV7Q9Y603 341 aa13.84□□□□□ -0.19
AC004540.1-202ENST00000430548 A0A0A6YYH2 397 aa13.83□□□□□ -0.2
AC004540.1-202ENST00000430548 A0A0J9YWU9 116 aa13.83□□□□□ -0.2
AC004540.1-202ENST00000430548 A6NJ64 397 aa13.83□□□□□ -0.2
AC004540.1-202ENST00000430548 SULT1C2O00338 296 aa13.83□□□□□ -0.2
AC004540.1-202ENST00000430548 TSPAN4O14817 238 aa13.83□□□□□ -0.2
AC004540.1-202ENST00000430548 ODF3L2Q3SX64 289 aa13.83□□□□□ -0.2
AC004540.1-202ENST00000430548 PLET1Q6UQ28 207 aa13.83□□□□□ -0.2
AC004540.1-202ENST00000430548 RBPMS2Q6ZRY4 209 aaKnown RBP13.83□□□□□ -0.2
AC004540.1-202ENST00000430548 LYG2Q86SG7 212 aa13.83□□□□□ -0.2
AC004540.1-202ENST00000430548 SPARTQ8N0X7 666 aa13.83□□□□□ -0.2
AC004540.1-202ENST00000430548 FCGR1BQ92637 280 aa13.83□□□□□ -0.2
AC004540.1-202ENST00000430548 ATP6V0BQ99437 205 aa13.83□□□□□ -0.2
AC004540.1-202ENST00000430548 QTRT1Q9BXR0 403 aaKnown RBP13.83□□□□□ -0.2
AC004540.1-202ENST00000430548 COMMD5Q9GZQ3 224 aa13.83□□□□□ -0.2
AC004540.1-202ENST00000430548 PLEKHA2Q9HB19 425 aa13.83□□□□□ -0.2
AC004540.1-202ENST00000430548 TMEM140Q9NV12 185 aa13.83□□□□□ -0.2
AC004540.1-202ENST00000430548 COMMD9Q9P000 198 aa13.83□□□□□ -0.2
AC004540.1-202ENST00000430548 RAB26Q9ULW5 256 aa13.83□□□□□ -0.2
AC004540.1-202ENST00000430548 S1PR2O95136 353 aa13.82□□□□□ -0.2
AC004540.1-202ENST00000430548 PSMB9P28065 219 aa13.82□□□□□ -0.2
AC004540.1-202ENST00000430548 BMI1P35226 326 aa13.82□□□□□ -0.2
AC004540.1-202ENST00000430548 APOC4P55056 127 aa13.82□□□□□ -0.2
AC004540.1-202ENST00000430548 WT1-ASQ06250 92 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms